RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 RNF144BQ7Z419 303 aa15.87■□□□□ 0.13
CAPN1-201ENST00000279247 NPRL2Q8WTW4 380 aa15.87■□□□□ 0.13
CAPN1-201ENST00000279247 ZC3HAV1LQ96H79 300 aaKnown RBP15.87■□□□□ 0.13
CAPN1-201ENST00000279247 TMEM41AQ96HV5 264 aa15.87■□□□□ 0.13
CAPN1-201ENST00000279247 NAA11Q9BSU3 229 aaPredicted RBP15.87■□□□□ 0.13
CAPN1-201ENST00000279247 B3GNT4Q9C0J1 378 aa15.87■□□□□ 0.13
CAPN1-201ENST00000279247 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.87■□□□□ 0.13
CAPN1-201ENST00000279247 FANCFQ9NPI8 374 aa15.87■□□□□ 0.13
CAPN1-201ENST00000279247 CACNA1GO43497 2377 aa15.87■□□□□ 0.13
CAPN1-201ENST00000279247 ATP6V1G1O75348 118 aa15.86■□□□□ 0.13
CAPN1-201ENST00000279247 CD63P08962 238 aa15.86■□□□□ 0.13
CAPN1-201ENST00000279247 RAB40ALP0C0E4 278 aa15.86■□□□□ 0.13
CAPN1-201ENST00000279247 HTR2CP28335 458 aa15.86■□□□□ 0.13
CAPN1-201ENST00000279247 SRD5A2P31213 254 aa15.86■□□□□ 0.13
CAPN1-201ENST00000279247 TMEM244Q5VVB8 128 aa15.86■□□□□ 0.13
CAPN1-201ENST00000279247 OR8S1Q8NH09 359 aa15.86■□□□□ 0.13
CAPN1-201ENST00000279247 EIF1BO60739 113 aaKnown RBP15.86■□□□□ 0.13
CAPN1-201ENST00000279247 NTF4P34130 210 aa15.86■□□□□ 0.13
CAPN1-201ENST00000279247 ADPRHL1Q8NDY3 354 aa15.86■□□□□ 0.13
CAPN1-201ENST00000279247 OR10D3Q8NH80 312 aa15.86■□□□□ 0.13
CAPN1-201ENST00000279247 ABHD3Q8WU67 409 aa15.86■□□□□ 0.13
CAPN1-201ENST00000279247 ELF5Q9UKW6 265 aaPredicted RBP15.86■□□□□ 0.13
CAPN1-201ENST00000279247 PAIP2BQ9ULR5 123 aaKnown RBP15.86■□□□□ 0.13
CAPN1-201ENST00000279247 TMEM272A0A1B0GTI8 110 aa15.86■□□□□ 0.13
CAPN1-201ENST00000279247 A0A1B0GVI7 797 aa15.86■□□□□ 0.13
CAPN1-201ENST00000279247 ZNHIT1O43257 154 aa15.86■□□□□ 0.13
CAPN1-201ENST00000279247 DBHP09172 617 aa15.86■□□□□ 0.13
CAPN1-201ENST00000279247 CX3CR1P49238 355 aa15.86■□□□□ 0.13
CAPN1-201ENST00000279247 MMP16P51512 607 aa15.86■□□□□ 0.13
CAPN1-201ENST00000279247 B3GALT5-AS1P59052 145 aa15.86■□□□□ 0.13
CAPN1-201ENST00000279247 CSRP2Q16527 193 aa15.86■□□□□ 0.13
CAPN1-201ENST00000279247 OR52N4Q8NGI2 321 aa15.86■□□□□ 0.13
CAPN1-201ENST00000279247 A0A0A6YYJ9 748 aa15.85■□□□□ 0.13
CAPN1-201ENST00000279247 SLC17A2O00624 439 aa15.85■□□□□ 0.13
CAPN1-201ENST00000279247 CTAG2O75638 210 aa15.85■□□□□ 0.13
CAPN1-201ENST00000279247 ACHEP22303 614 aa15.85■□□□□ 0.13
CAPN1-201ENST00000279247 C9orf135Q5VTT2 229 aa15.85■□□□□ 0.13
CAPN1-201ENST00000279247 HDDC2Q7Z4H3 204 aa15.85■□□□□ 0.13
CAPN1-201ENST00000279247 OR1J2Q8NGS2 313 aa15.85■□□□□ 0.13
CAPN1-201ENST00000279247 RAB40AQ8WXH6 277 aa15.85■□□□□ 0.13
CAPN1-201ENST00000279247 CDC6Q99741 560 aa15.85■□□□□ 0.13
CAPN1-201ENST00000279247 OR10A4Q9H209 315 aa15.85■□□□□ 0.13
CAPN1-201ENST00000279247 GPR84Q9NQS5 396 aa15.85■□□□□ 0.13
CAPN1-201ENST00000279247 UBCP0CG48 685 aaKnown RBP15.85■□□□□ 0.13
CAPN1-201ENST00000279247 KLF9Q13886 244 aaPredicted RBP15.85■□□□□ 0.13
CAPN1-201ENST00000279247 OR8B12Q8NGG6 310 aa15.85■□□□□ 0.13
CAPN1-201ENST00000279247 OR4D6Q8NGJ1 314 aa15.85■□□□□ 0.13
CAPN1-201ENST00000279247 UTP23Q9BRU9 249 aaKnown RBP15.85■□□□□ 0.13
CAPN1-201ENST00000279247 E9PLN8 166 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 SRSF6Q13247 344 aaKnown RBP15.84■□□□□ 0.13
CAPN1-201ENST00000279247 OR1C1Q15619 314 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 ZIC4Q8N9L1 334 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 ACBD4Q8NC06 268 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 DVL3Q92997 716 aaPredicted RBP15.84■□□□□ 0.13
CAPN1-201ENST00000279247 CREB3L1Q96BA8 519 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 CRLF2Q9HC73 371 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 ZFP64Q9NPA5 681 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 PLSCR3Q9NRY6 295 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 PLEK2Q9NYT0 353 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 STMND1H3BQB6 276 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 GABARAPH6UMI1 98 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 DHHO43323 396 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 NEURL1O76050 574 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 ZNF20P17024 532 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 FKBP2P26885 142 aaKnown RBP15.84■□□□□ 0.13
CAPN1-201ENST00000279247 PCGF3Q3KNV8 242 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 TMEM81Q6P7N7 255 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 GGNQ86UU5 652 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 VASH2Q86V25 355 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 HRASLSQ9HDD0 168 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 DIABLOQ9NR28 239 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 ZNF275Q9NSD4 429 aaPredicted RBP15.84■□□□□ 0.13
CAPN1-201ENST00000279247 NPAP1Q9NZP6 1156 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 ETV7Q9Y603 341 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 LOC100289279A0A1B0GTE1 492 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 MSR1P21757 451 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 RCVRNP35243 200 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 CLDN15P56746 228 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 C3AR1Q16581 482 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 DEGS2Q6QHC5 323 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 BAIAP2L2Q6UXY1 529 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 ELMOD2Q8IZ81 293 aa15.84■□□□□ 0.13
CAPN1-201ENST00000279247 GGT3PA6NGU5 568 aa15.83■□□□□ 0.12
CAPN1-201ENST00000279247 ITGB2P05107 769 aa15.83■□□□□ 0.12
CAPN1-201ENST00000279247 B4GALT1P15291 398 aa15.83■□□□□ 0.12
CAPN1-201ENST00000279247 MAGEA5P43359 124 aa15.83■□□□□ 0.12
CAPN1-201ENST00000279247 RAC3P60763 192 aa15.83■□□□□ 0.12
CAPN1-201ENST00000279247 PSMA6P60900 246 aaKnown RBP15.83■□□□□ 0.12
CAPN1-201ENST00000279247 GALNTL5Q7Z4T8 443 aa15.83■□□□□ 0.12
CAPN1-201ENST00000279247 CMBLQ96DG6 245 aa15.83■□□□□ 0.12
CAPN1-201ENST00000279247 PAQR5Q9NXK6 330 aaPredicted RBP15.83■□□□□ 0.12
CAPN1-201ENST00000279247 ZNF222Q9UK12 451 aa15.83■□□□□ 0.12
CAPN1-201ENST00000279247 RP1L1Q8IWN7 2480 aaPredicted RBP15.83■□□□□ 0.12
CAPN1-201ENST00000279247 ARGFXA6NJG6 315 aa15.83■□□□□ 0.12
CAPN1-201ENST00000279247 GJE1A6NN92 205 aa15.83■□□□□ 0.12
CAPN1-201ENST00000279247 GLSO94925 669 aaPredicted RBP15.83■□□□□ 0.12
CAPN1-201ENST00000279247 DHFRP00374 187 aa15.83■□□□□ 0.12
CAPN1-201ENST00000279247 ALDOBP05062 364 aa15.83■□□□□ 0.12
CAPN1-201ENST00000279247 CASRP41180 1078 aa15.83■□□□□ 0.12
CAPN1-201ENST00000279247 PLGLB1Q02325 96 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms