RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 J3QW42 95 aa12.21□□□□□ -0.45
HMGN3-201ENST00000275036 GYG2O15488 501 aa12.21□□□□□ -0.45
HMGN3-201ENST00000275036 GYPBP06028 91 aa12.21□□□□□ -0.45
HMGN3-201ENST00000275036 ACSM4P0C7M7 580 aa12.21□□□□□ -0.45
HMGN3-201ENST00000275036 CLUP10909 449 aa12.21□□□□□ -0.45
HMGN3-201ENST00000275036 RAC2P15153 192 aa12.21□□□□□ -0.45
HMGN3-201ENST00000275036 ANOS1P23352 680 aa12.21□□□□□ -0.45
HMGN3-201ENST00000275036 RGS6P49758 472 aa12.21□□□□□ -0.45
HMGN3-201ENST00000275036 DVL1P1P54792 670 aaPredicted RBP12.21□□□□□ -0.45
HMGN3-201ENST00000275036 HFEQ30201 348 aa12.21□□□□□ -0.45
HMGN3-201ENST00000275036 SLC36A3Q495N2 470 aa12.21□□□□□ -0.45
HMGN3-201ENST00000275036 DNAL1Q4LDG9 190 aa12.21□□□□□ -0.45
HMGN3-201ENST00000275036 CD300LDQ6UXZ3 194 aa12.21□□□□□ -0.45
HMGN3-201ENST00000275036 FBXW12Q6X9E4 464 aa12.21□□□□□ -0.45
HMGN3-201ENST00000275036 COLCA1Q6ZS62 124 aa12.21□□□□□ -0.45
HMGN3-201ENST00000275036 NAA40Q86UY6 237 aa12.21□□□□□ -0.45
HMGN3-201ENST00000275036 HS3ST5Q8IZT8 346 aa12.21□□□□□ -0.45
HMGN3-201ENST00000275036 OR5AS1Q8N127 324 aa12.21□□□□□ -0.45
HMGN3-201ENST00000275036 PROKR2Q8NFJ6 384 aa12.21□□□□□ -0.45
HMGN3-201ENST00000275036 CCL17Q92583 94 aa12.21□□□□□ -0.45
HMGN3-201ENST00000275036 POP5Q969H6 163 aaKnown RBP12.21□□□□□ -0.45
HMGN3-201ENST00000275036 FEVQ99581 238 aa12.21□□□□□ -0.45
HMGN3-201ENST00000275036 PITX2Q99697 317 aa12.21□□□□□ -0.45
HMGN3-201ENST00000275036 B4DSR2 109 aa12.2□□□□□ -0.46
HMGN3-201ENST00000275036 CLDN25C9JDP6 229 aa12.2□□□□□ -0.46
HMGN3-201ENST00000275036 F5H5K5 113 aa12.2□□□□□ -0.46
HMGN3-201ENST00000275036 DEAF1O75398 565 aaPredicted RBP12.2□□□□□ -0.46
HMGN3-201ENST00000275036 HNF1AP20823 631 aa12.2□□□□□ -0.46
HMGN3-201ENST00000275036 PRSS12P56730 875 aa12.2□□□□□ -0.46
HMGN3-201ENST00000275036 TNFAIP6P98066 277 aaPredicted RBP12.2□□□□□ -0.46
HMGN3-201ENST00000275036 FLOT2Q14254 428 aa12.2□□□□□ -0.46
HMGN3-201ENST00000275036 ZMAT1Q5H9K5 638 aa12.2□□□□□ -0.46
HMGN3-201ENST00000275036 OR2T2Q6IF00 324 aa12.2□□□□□ -0.46
HMGN3-201ENST00000275036 IQCF1Q8N6M8 205 aa12.2□□□□□ -0.46
HMGN3-201ENST00000275036 OR2T33Q8NG76 320 aa12.2□□□□□ -0.46
HMGN3-201ENST00000275036 OR2Z1Q8NG97 314 aa12.2□□□□□ -0.46
HMGN3-201ENST00000275036 OR2AJ1Q8NGZ0 328 aa12.2□□□□□ -0.46
HMGN3-201ENST00000275036 OR2T4Q8NH00 348 aa12.2□□□□□ -0.46
HMGN3-201ENST00000275036 GIPC3Q8TF64 312 aa12.2□□□□□ -0.46
HMGN3-201ENST00000275036 TMEM158Q8WZ71 300 aa12.2□□□□□ -0.46
HMGN3-201ENST00000275036 APOBEC3DQ96AK3 386 aaPredicted RBP12.2□□□□□ -0.46
HMGN3-201ENST00000275036 COG8Q96MW5 612 aa12.2□□□□□ -0.46
HMGN3-201ENST00000275036 DIRC2Q96SL1 478 aa12.2□□□□□ -0.46
HMGN3-201ENST00000275036 ATF6BQ99941 703 aa12.2□□□□□ -0.46
HMGN3-201ENST00000275036 CDADC1Q9BWV3 514 aa12.2□□□□□ -0.46
HMGN3-201ENST00000275036 C1QTNF5Q9BXJ0 243 aa12.2□□□□□ -0.46
HMGN3-201ENST00000275036 EGLN1Q9GZT9 426 aa12.2□□□□□ -0.46
HMGN3-201ENST00000275036 ZNF665Q9H7R5 613 aa12.2□□□□□ -0.46
HMGN3-201ENST00000275036 WDR76Q9H967 626 aa12.2□□□□□ -0.46
HMGN3-201ENST00000275036 POMPQ9Y244 141 aa12.2□□□□□ -0.46
HMGN3-201ENST00000275036 COMMD3-BMI1R4GMX3 469 aa12.2□□□□□ -0.46
HMGN3-201ENST00000275036 TCRBV3S1A0A5B6 114 aa12.19□□□□□ -0.46
HMGN3-201ENST00000275036 ARRDC5A6NEK1 342 aa12.19□□□□□ -0.46
HMGN3-201ENST00000275036 DNAJC8O75937 253 aaPredicted RBP12.19□□□□□ -0.46
HMGN3-201ENST00000275036 MSMBP08118 114 aa12.19□□□□□ -0.46
HMGN3-201ENST00000275036 ZNF823P16415 610 aa12.19□□□□□ -0.46
HMGN3-201ENST00000275036 SPI1P17947 270 aa12.19□□□□□ -0.46
HMGN3-201ENST00000275036 GK3PQ14409 553 aa12.19□□□□□ -0.46
HMGN3-201ENST00000275036 SPATA24Q86W54 205 aa12.19□□□□□ -0.46
HMGN3-201ENST00000275036 ZNF511Q8NB15 262 aa12.19□□□□□ -0.46
HMGN3-201ENST00000275036 OR5L1Q8NGL2 311 aa12.19□□□□□ -0.46
HMGN3-201ENST00000275036 ITLN1Q8WWA0 313 aa12.19□□□□□ -0.46
HMGN3-201ENST00000275036 TMEM186Q96B77 213 aa12.19□□□□□ -0.46
HMGN3-201ENST00000275036 SLCO4A1Q96BD0 722 aa12.19□□□□□ -0.46
HMGN3-201ENST00000275036 HCAR1Q9BXC0 346 aa12.19□□□□□ -0.46
HMGN3-201ENST00000275036 CADM1Q9BY67 442 aaKnown RBP12.19□□□□□ -0.46
HMGN3-201ENST00000275036 MED20Q9H944 212 aa12.19□□□□□ -0.46
HMGN3-201ENST00000275036 HIF1ANQ9NWT6 349 aa12.19□□□□□ -0.46
HMGN3-201ENST00000275036 KCNG2Q9UJ96 466 aa12.19□□□□□ -0.46
HMGN3-201ENST00000275036 BAIAP2Q9UQB8 552 aa12.19□□□□□ -0.46
HMGN3-201ENST00000275036 C5orf63A6NC05 138 aa12.18□□□□□ -0.46
HMGN3-201ENST00000275036 FAM183AA6NL82 134 aa12.18□□□□□ -0.46
HMGN3-201ENST00000275036 H0YL77 283 aa12.18□□□□□ -0.46
HMGN3-201ENST00000275036 FKBP6O75344 327 aa12.18□□□□□ -0.46
HMGN3-201ENST00000275036 IGHV2-5P01817 119 aa12.18□□□□□ -0.46
HMGN3-201ENST00000275036 SLC25A1P53007 311 aa12.18□□□□□ -0.46
HMGN3-201ENST00000275036 BNIP1Q12981 228 aa12.18□□□□□ -0.46
HMGN3-201ENST00000275036 ECH1Q13011 328 aa12.18□□□□□ -0.46
HMGN3-201ENST00000275036 PCK2Q16822 640 aa12.18□□□□□ -0.46
HMGN3-201ENST00000275036 LINC01590Q5TEZ4 76 aa12.18□□□□□ -0.46
HMGN3-201ENST00000275036 C1orf229Q6ZS94 237 aaPredicted RBP12.18□□□□□ -0.46
HMGN3-201ENST00000275036 ZNF771Q7L3S4 317 aaPredicted RBP12.18□□□□□ -0.46
HMGN3-201ENST00000275036 GLCCI1Q86VQ1 547 aa12.18□□□□□ -0.46
HMGN3-201ENST00000275036 OR8G5Q8NG78 346 aa12.18□□□□□ -0.46
HMGN3-201ENST00000275036 OR10AD1Q8NGE0 317 aa12.18□□□□□ -0.46
HMGN3-201ENST00000275036 RAB1CQ92928 201 aa12.18□□□□□ -0.46
HMGN3-201ENST00000275036 OR2V2Q96R30 315 aa12.18□□□□□ -0.46
HMGN3-201ENST00000275036 REPIN1Q9BWE0 567 aaKnown RBP12.18□□□□□ -0.46
HMGN3-201ENST00000275036 G6PC2Q9NQR9 355 aa12.18□□□□□ -0.46
HMGN3-201ENST00000275036 CMC2Q9NRP2 79 aa12.18□□□□□ -0.46
HMGN3-201ENST00000275036 PDP1Q9P0J1 537 aaPredicted RBP12.18□□□□□ -0.46
HMGN3-201ENST00000275036 IL19Q9UHD0 177 aa12.18□□□□□ -0.46
HMGN3-201ENST00000275036 IQCF6A8MYZ5 107 aa12.17□□□□□ -0.46
HMGN3-201ENST00000275036 M0R135 149 aa12.17□□□□□ -0.46
HMGN3-201ENST00000275036 GNGT2O14610 69 aa12.17□□□□□ -0.46
HMGN3-201ENST00000275036 GSC2O15499 205 aa12.17□□□□□ -0.46
HMGN3-201ENST00000275036 MLNRO43193 412 aa12.17□□□□□ -0.46
HMGN3-201ENST00000275036 AVPP01185 164 aa12.17□□□□□ -0.46
HMGN3-201ENST00000275036 LCATP04180 440 aa12.17□□□□□ -0.46
HMGN3-201ENST00000275036 PRKACGP22612 351 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms