RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 ALKBH3Q96Q83 286 aaPredicted RBP10.4□□□□□ -0.74
USP53-201ENST00000274030 RPP25Q9BUL9 199 aaKnown RBP10.4□□□□□ -0.74
USP53-201ENST00000274030 SLCO1C1Q9NYB5 712 aa10.4□□□□□ -0.74
USP53-201ENST00000274030 C4AP0C0L4 1744 aa10.4□□□□□ -0.75
USP53-201ENST00000274030 TRBV5-4A0A0C4DH59 114 aa10.4□□□□□ -0.75
USP53-201ENST00000274030 FXYD1O00168 92 aa10.4□□□□□ -0.75
USP53-201ENST00000274030 SNRPNP63162 240 aaKnown RBP10.4□□□□□ -0.75
USP53-201ENST00000274030 CCL7P80098 99 aa10.4□□□□□ -0.75
USP53-201ENST00000274030 OR2L13Q8N349 312 aa10.4□□□□□ -0.75
USP53-201ENST00000274030 SLC38A9Q8NBW4 561 aa10.4□□□□□ -0.75
USP53-201ENST00000274030 AKR7LQ8NHP1 331 aa10.4□□□□□ -0.75
USP53-201ENST00000274030 PBOV1Q9GZY1 135 aa10.4□□□□□ -0.75
USP53-201ENST00000274030 ADAM19Q9H013 955 aa10.4□□□□□ -0.75
USP53-201ENST00000274030 PLEKHB1Q9UF11 243 aaPredicted RBP10.4□□□□□ -0.75
USP53-201ENST00000274030 RNF150Q9ULK6 438 aa10.4□□□□□ -0.75
USP53-201ENST00000274030 KLF13Q9Y2Y9 288 aaPredicted RBP10.4□□□□□ -0.75
USP53-201ENST00000274030 CRYM-AS1A6NIL9 109 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 FZD6O60353 706 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 CRYAAP02489 173 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 CD3DP04234 171 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 SEMG1P04279 462 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 HAAOP46952 286 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 MLF1P58340 268 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 SMAD4Q13485 552 aaKnown RBP10.39□□□□□ -0.75
USP53-201ENST00000274030 IL10RAQ13651 578 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 NAA40Q86UY6 237 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 CDCA4Q9BXL8 241 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 TMEM231Q9H6L2 316 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 AUNIPQ9H7T9 357 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 SLC6A13Q9NSD5 602 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 SERGEFQ9UGK8 458 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 ARID1AO14497 2285 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 APC2O95996 2303 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 TRAF3IP2O43734 574 aaPredicted RBP10.39□□□□□ -0.75
USP53-201ENST00000274030 APOA2P02652 100 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 PDGFAP04085 211 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 ADAM5Q6NVV9 412 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 LCN15Q6UWW0 184 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 PLXDC2Q6UX71 529 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 SLC25A26Q70HW3 274 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 OR52N5Q8NH56 324 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 TMED6Q8WW62 240 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 MARC2Q969Z3 335 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 PLPPR2Q96GM1 343 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 ZNF724A8MTY0 619 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 SSSCA1O60232 199 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 RGPD1P0DJD0 1748 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 DBPQ10586 325 aaPredicted RBP10.39□□□□□ -0.75
USP53-201ENST00000274030 HAGHQ16775 308 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 OR52H1Q8NGJ2 320 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 OR13C8Q8NGS7 320 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 TERB2Q8NHR7 220 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 EDEM2Q9BV94 578 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 PROCRQ9UNN8 238 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 TRGV8A0A0C4DH27 118 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 MEX3AA1L020 520 aaKnown RBP10.39□□□□□ -0.75
USP53-201ENST00000274030 SH2D1BO14796 132 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 IAPPP10997 89 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 PCBP3P57721 371 aaKnown RBP10.39□□□□□ -0.75
USP53-201ENST00000274030 TMEM123Q8N131 208 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 TMEM104Q8NE00 496 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 OR5M9Q8NGP3 310 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 OR10X1Q8NGY0 326 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 BOD1Q96IK1 185 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 OXGR1Q96P68 337 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 DERL3Q96Q80 235 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 F6UZH7 168 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 AIPO00170 330 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 GLAP06280 429 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 GABRG2P18507 467 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 HRH1P35367 487 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 EMC4Q5J8M3 183 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 Q6ZRG5 221 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 RIMKLAQ8IXN7 391 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 C15orf54Q8N8G6 183 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 MITD1Q8WV92 249 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 TMEM43Q9BTV4 400 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 LRRC61Q9BV99 259 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 TEX101Q9BY14 249 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 MAGT1Q9H0U3 335 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 TXNIPQ9H3M7 391 aa10.39□□□□□ -0.75
USP53-201ENST00000274030 CXCL10P02778 98 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 RAF1P04049 648 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 TGM1P22735 817 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 RFX2P48378 723 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 FLI1Q01543 452 aaPredicted RBP10.38□□□□□ -0.75
USP53-201ENST00000274030 PDZD11Q5EBL8 140 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 STAC2Q6ZMT1 411 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 OR8U1Q8NH10 309 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 SMIM19Q96E16 107 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 DUSP21Q9H596 190 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 MED9Q9NWA0 146 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 CACNA1SQ13698 1873 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 A0A0A6YYJ9 748 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 TMEM200CA6NKL6 621 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 IFITM5A6NNB3 132 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 C4orf47A7E2U8 309 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 DUSP1P28562 367 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 FCGR2CP31995 323 aa10.38□□□□□ -0.75
USP53-201ENST00000274030 GPR12P47775 334 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms