RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 OR5D18Q8NGL1 313 aa11.09□□□□□ -0.63
SRRM4-201ENST00000267260 RHBDD1Q8TEB9 315 aa11.09□□□□□ -0.63
SRRM4-201ENST00000267260 SLC25A43Q8WUT9 341 aaPredicted RBP11.09□□□□□ -0.63
SRRM4-201ENST00000267260 RPL3LQ92901 407 aaKnown RBP11.09□□□□□ -0.63
SRRM4-201ENST00000267260 FYTTD1Q96QD9 318 aaKnown RBP11.09□□□□□ -0.63
SRRM4-201ENST00000267260 TREX1Q9NSU2 369 aa11.09□□□□□ -0.63
SRRM4-201ENST00000267260 SLCO3A1Q9UIG8 710 aa11.09□□□□□ -0.63
SRRM4-201ENST00000267260 NDRG4Q9ULP0 352 aaKnown RBP11.09□□□□□ -0.63
SRRM4-201ENST00000267260 ZNF256Q9Y2P7 627 aaPredicted RBP11.09□□□□□ -0.63
SRRM4-201ENST00000267260 MMACHCQ9Y4U1 282 aa11.09□□□□□ -0.63
SRRM4-201ENST00000267260 HCRTO43612 131 aa11.09□□□□□ -0.63
SRRM4-201ENST00000267260 TFAP2AP05549 437 aa11.09□□□□□ -0.63
SRRM4-201ENST00000267260 ADRA1AP35348 466 aa11.09□□□□□ -0.63
SRRM4-201ENST00000267260 SRP9P49458 86 aaKnown RBP11.09□□□□□ -0.63
SRRM4-201ENST00000267260 IHHQ14623 411 aa11.09□□□□□ -0.63
SRRM4-201ENST00000267260 NAA50Q9GZZ1 169 aaKnown RBP11.09□□□□□ -0.63
SRRM4-201ENST00000267260 OR5V1Q9UGF6 321 aa11.09□□□□□ -0.63
SRRM4-201ENST00000267260 KLRC4-KLRK1H3BQV0 150 aa11.08□□□□□ -0.63
SRRM4-201ENST00000267260 PRDX1Q06830 199 aaKnown RBP11.08□□□□□ -0.63
SRRM4-201ENST00000267260 HNRNPA1L2Q32P51 320 aaKnown RBP11.08□□□□□ -0.63
SRRM4-201ENST00000267260 FDX2Q6P4F2 183 aa11.08□□□□□ -0.63
SRRM4-201ENST00000267260 ZNF813Q6ZN06 617 aa11.08□□□□□ -0.63
SRRM4-201ENST00000267260 COX7A2P2O60397 106 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 APEHP13798 732 aaKnown RBP11.08□□□□□ -0.64
SRRM4-201ENST00000267260 RACK1P63244 317 aaKnown RBP11.08□□□□□ -0.64
SRRM4-201ENST00000267260 YOD1Q5VVQ6 348 aaPredicted RBP11.08□□□□□ -0.64
SRRM4-201ENST00000267260 LIPIQ6XZB0 460 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 PLPP7Q8NBV4 271 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 OR2D3Q8NGH3 330 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 TCN2P20062 427 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 MEOX2P50222 304 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 NOVA1P51513 510 aaKnown RBP11.08□□□□□ -0.64
SRRM4-201ENST00000267260 SHISA6Q6ZSJ9 500 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 SLC39A11Q8N1S5 342 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 PHYHIPLQ96FC7 376 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 TAAR2Q9P1P5 351 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 FURINP09958 794 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 JUNBP17275 347 aaPredicted RBP11.08□□□□□ -0.64
SRRM4-201ENST00000267260 DRAM2Q6UX65 266 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 SPRED1Q7Z699 444 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 TP53RKQ96S44 253 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 BCL2L11O43521 198 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 AQP8O94778 261 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 SMN1Q16637 294 aaKnown RBP11.08□□□□□ -0.64
SRRM4-201ENST00000267260 SLC38A9Q8NBW4 561 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 BCL2L2Q92843 193 aaPredicted RBP11.08□□□□□ -0.64
SRRM4-201ENST00000267260 TAAR9Q96RI9 348 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 ARAP2Q8WZ64 1704 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 LY86O95711 162 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 SLC25A4P12235 298 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 NPY1RP25929 384 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 GJA4P35212 333 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 APOBEC1P41238 236 aaKnown RBP11.08□□□□□ -0.64
SRRM4-201ENST00000267260 FOXK2Q01167 660 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 ZNF468Q5VIY5 522 aaPredicted RBP11.08□□□□□ -0.64
SRRM4-201ENST00000267260 GLIPR1L1Q6UWM5 242 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 CYHR1Q6ZMK1 362 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 ZNF429Q86V71 674 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 MFSD4AQ8N468 514 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 RREB1Q92766 1687 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 A0A1B0GUH1 482 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 CCSO14618 274 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 S100A4P26447 101 aaKnown RBP11.08□□□□□ -0.64
SRRM4-201ENST00000267260 HERVK_113P61574 105 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 IL10RAQ13651 578 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 ATP6V1FQ16864 119 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 CALHM2Q9HA72 323 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 PPP1R3CQ9UQK1 317 aa11.08□□□□□ -0.64
SRRM4-201ENST00000267260 P2RY10O00398 339 aa11.07□□□□□ -0.64
SRRM4-201ENST00000267260 GRPP07492 148 aa11.07□□□□□ -0.64
SRRM4-201ENST00000267260 RBP2P50120 134 aa11.07□□□□□ -0.64
SRRM4-201ENST00000267260 EDDM3AQ14507 147 aa11.07□□□□□ -0.64
SRRM4-201ENST00000267260 DCXRQ7Z4W1 244 aa11.07□□□□□ -0.64
SRRM4-201ENST00000267260 GPX8Q8TED1 209 aa11.07□□□□□ -0.64
SRRM4-201ENST00000267260 NXF2Q9GZY0 626 aaKnown RBP11.07□□□□□ -0.64
SRRM4-201ENST00000267260 CHST8Q9H2A9 424 aa11.07□□□□□ -0.64
SRRM4-201ENST00000267260 CHST11Q9NPF2 352 aa11.07□□□□□ -0.64
SRRM4-201ENST00000267260 ATAD5Q96QE3 1844 aa11.07□□□□□ -0.64
SRRM4-201ENST00000267260 TRAV34A0A0B4J273 112 aa11.07□□□□□ -0.64
SRRM4-201ENST00000267260 NDUFB7P17568 137 aa11.07□□□□□ -0.64
SRRM4-201ENST00000267260 EN2P19622 333 aaPredicted RBP11.07□□□□□ -0.64
SRRM4-201ENST00000267260 ACHEP22303 614 aa11.07□□□□□ -0.64
SRRM4-201ENST00000267260 PAX5Q02548 391 aa11.07□□□□□ -0.64
SRRM4-201ENST00000267260 GPRIN1Q7Z2K8 1008 aa11.07□□□□□ -0.64
SRRM4-201ENST00000267260 CHST14Q8NCH0 376 aa11.07□□□□□ -0.64
SRRM4-201ENST00000267260 CPPED1Q9BRF8 314 aaPredicted RBP11.07□□□□□ -0.64
SRRM4-201ENST00000267260 ZMAT3Q9HA38 289 aaKnown RBP11.07□□□□□ -0.64
SRRM4-201ENST00000267260 TMEM129A0AVI4 362 aa11.07□□□□□ -0.64
SRRM4-201ENST00000267260 SDHAP31040 664 aa11.07□□□□□ -0.64
SRRM4-201ENST00000267260 IL17CQ9P0M4 197 aa11.07□□□□□ -0.64
SRRM4-201ENST00000267260 ELOA3CA0A087WX78 387 aaPredicted RBP11.07□□□□□ -0.64
SRRM4-201ENST00000267260 CRXO43186 299 aaPredicted RBP11.07□□□□□ -0.64
SRRM4-201ENST00000267260 TBX19O60806 448 aa11.07□□□□□ -0.64
SRRM4-201ENST00000267260 SCRG1O75711 98 aa11.07□□□□□ -0.64
SRRM4-201ENST00000267260 FUCA1P04066 466 aa11.07□□□□□ -0.64
SRRM4-201ENST00000267260 PIPP12273 146 aaPredicted RBP11.07□□□□□ -0.64
SRRM4-201ENST00000267260 TGFBR1P36897 503 aa11.07□□□□□ -0.64
SRRM4-201ENST00000267260 SHHQ15465 462 aa11.07□□□□□ -0.64
SRRM4-201ENST00000267260 RPEL1Q2QD12 228 aa11.07□□□□□ -0.64
SRRM4-201ENST00000267260 ZBTB37Q5TC79 503 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms