RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 OR8B8Q15620 311 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 PLXDC2Q6UX71 529 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 LGI3Q8N145 548 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 OR10G3Q8NGC4 313 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 OR2V1Q8NHB1 315 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 ANKRD9Q96BM1 317 aaPredicted RBP12.63□□□□□ -0.39
CDH3-201ENST00000264012 ARPC3O15145 178 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 NRASP01111 189 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 TAGLNQ01995 201 aaKnown RBP12.63□□□□□ -0.39
CDH3-201ENST00000264012 MYBPHQ13203 477 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 LAIR1Q6GTX8 287 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 ZNF687Q8N1G0 1237 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 OTOSQ8NHW6 89 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 INTS12Q96CB8 462 aaKnown RBP12.63□□□□□ -0.39
CDH3-201ENST00000264012 EXO1Q9UQ84 846 aaKnown RBP12.63□□□□□ -0.39
CDH3-201ENST00000264012 WISP3O95389 354 aaPredicted RBP12.63□□□□□ -0.39
CDH3-201ENST00000264012 IGHA2P01877 340 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 USF2Q15853 346 aaPredicted RBP12.63□□□□□ -0.39
CDH3-201ENST00000264012 SLC25A35Q3KQZ1 300 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 PDLIM3Q53GG5 364 aaPredicted RBP12.63□□□□□ -0.39
CDH3-201ENST00000264012 TIGD3Q6B0B8 471 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 SUMF2Q8NBJ7 301 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 S100PBPQ96BU1 408 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 OR8B4Q96RC9 309 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 FAM212BQ9NTI7 297 aaPredicted RBP12.63□□□□□ -0.39
CDH3-201ENST00000264012 MN1Q10571 1320 aaPredicted RBP12.63□□□□□ -0.39
CDH3-201ENST00000264012 PLXNB2O15031 1838 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 TRBV5-3A0A0A0MS03 114 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 ALG1L2C9J202 215 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 SULT1C2O00338 296 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 TOR1AO14656 332 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 HS3ST1O14792 307 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 NUPL2O15504 423 aaKnown RBP12.63□□□□□ -0.39
CDH3-201ENST00000264012 MESP2Q0VG99 397 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 EIF2S3LQ2VIR3 472 aaKnown RBP12.63□□□□□ -0.39
CDH3-201ENST00000264012 RHOUQ7L0Q8 258 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 NUDCD2Q8WVJ2 157 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 TRIB1Q96RU8 372 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 DDOQ99489 341 aa12.63□□□□□ -0.39
CDH3-201ENST00000264012 TRAV1-2A0A0B4J238 106 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 SHOXO15266 292 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 SPINT2O43291 252 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 SNCAP37840 140 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 ALDH3B1P43353 468 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 ZNF121P58317 390 aaPredicted RBP12.62□□□□□ -0.39
CDH3-201ENST00000264012 SHEQ5VZ18 495 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 MRM1Q6IN84 353 aaKnown RBP12.62□□□□□ -0.39
CDH3-201ENST00000264012 CD300LDQ6UXZ3 194 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 UBE3DQ7Z6J8 389 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 DPPA2Q7Z7J5 298 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 SLC51BQ86UW2 128 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 NOXO1Q8NFA2 376 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 ALKBH3Q96Q83 286 aaPredicted RBP12.62□□□□□ -0.39
CDH3-201ENST00000264012 HAO2Q9NYQ3 351 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 CCSO14618 274 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 EML2O95834 649 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 IL2RAP01589 272 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 CDAP32320 146 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 SLC25A1P53007 311 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 DYRK1AQ13627 763 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 DEFB109BQ30KR1 87 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 SMRP1Q8NCR6 262 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 MSI2Q96DH6 328 aaKnown RBP12.62□□□□□ -0.39
CDH3-201ENST00000264012 ZC3HAV1LQ96H79 300 aaKnown RBP12.62□□□□□ -0.39
CDH3-201ENST00000264012 TRIM64BA6NI03 449 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 XRCC2O43543 280 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 TFF2Q03403 129 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 GPNMBQ14956 572 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 OR8G1Q15617 311 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.62□□□□□ -0.39
CDH3-201ENST00000264012 ANKRD37Q7Z713 158 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 OR2I1PQ8NGU4 316 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 SEH1LQ96EE3 360 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 REEP6Q96HR9 211 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 PFDN5Q99471 154 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 SRRQ9GZT4 340 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 ERVMER34-1Q9H9K5 563 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 HRASLSQ9HDD0 168 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 P4HTMQ9NXG6 502 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 NPIPB8E9PQR5 432 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 PRSS23O95084 383 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 RAB4BP61018 213 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 BTN1A1Q13410 526 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 TOMM34Q15785 309 aaPredicted RBP12.62□□□□□ -0.39
CDH3-201ENST00000264012 FAAP20Q6NZ36 180 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 TFAP2EQ6VUC0 442 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 WDSUB1Q8N9V3 476 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 RBMXL1Q96E39 390 aaKnown RBP12.62□□□□□ -0.39
CDH3-201ENST00000264012 DECR2Q9NUI1 292 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 TIMM8BQ9Y5J9 83 aaPredicted RBP12.62□□□□□ -0.39
CDH3-201ENST00000264012 SLCO1B1Q9Y6L6 691 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 ATAD5Q96QE3 1844 aa12.62□□□□□ -0.39
CDH3-201ENST00000264012 A0A1W2PPV9 198 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 PRRG2O14669 202 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 SPINT1O43278 529 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 LILRB5O75023 590 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 CLDN1O95832 211 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 LIMS3P0CW19 117 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 LIMS4P0CW20 117 aa12.61□□□□□ -0.39
CDH3-201ENST00000264012 CHATP28329 748 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms