RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 CCDC92Q53HC0 331 aaPredicted RBP10.3□□□□□ -0.76
TRAF4-202ENST00000262396 CORO6Q6QEF8 472 aa10.3□□□□□ -0.76
TRAF4-202ENST00000262396 SHISA2Q6UWI4 295 aa10.3□□□□□ -0.76
TRAF4-202ENST00000262396 FBXW12Q6X9E4 464 aa10.3□□□□□ -0.76
TRAF4-202ENST00000262396 DOK3Q7L591 496 aa10.3□□□□□ -0.76
TRAF4-202ENST00000262396 MRPL21Q7Z2W9 205 aaKnown RBP10.3□□□□□ -0.76
TRAF4-202ENST00000262396 FAM122BQ7Z309 247 aa10.3□□□□□ -0.76
TRAF4-202ENST00000262396 BOLLQ8N9W6 283 aaKnown RBP10.3□□□□□ -0.76
TRAF4-202ENST00000262396 DEFB108BQ8NET1 73 aa10.3□□□□□ -0.76
TRAF4-202ENST00000262396 TSSK2Q96PF2 358 aa10.3□□□□□ -0.76
TRAF4-202ENST00000262396 FAM107BQ9H098 131 aa10.3□□□□□ -0.76
TRAF4-202ENST00000262396 MMADHCQ9H3L0 296 aaPredicted RBP10.3□□□□□ -0.76
TRAF4-202ENST00000262396 GCM1Q9NP62 436 aa10.3□□□□□ -0.76
TRAF4-202ENST00000262396 SPAG4Q9NPE6 437 aa10.3□□□□□ -0.76
TRAF4-202ENST00000262396 ESM1Q9NQ30 184 aa10.3□□□□□ -0.76
TRAF4-202ENST00000262396 CLN8Q9UBY8 286 aa10.3□□□□□ -0.76
TRAF4-202ENST00000262396 NOP16Q9Y3C1 178 aaKnown RBP10.3□□□□□ -0.76
TRAF4-202ENST00000262396 TRBV4-1A0A0J9YWV2 114 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 DNAJC9-AS1A6NH13 148 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 F5H5P2 479 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 PTP4A3O75365 173 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 HKR1P10072 659 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 CPT2P23786 658 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 GGT2P36268 569 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 MDH1P40925 334 aaKnown RBP10.29□□□□□ -0.76
TRAF4-202ENST00000262396 CDKN2AP42771 156 aaKnown RBP10.29□□□□□ -0.76
TRAF4-202ENST00000262396 PITPNBP48739 271 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 ERFP50548 548 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 TPTEP56180 551 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 ECH1Q13011 328 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 FHL1Q13642 323 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 TAF13Q15543 124 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 KCNJ8Q15842 424 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 HACD2Q6Y1H2 254 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 PTCHD4Q6ZW05 846 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 PGAP1Q75T13 922 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 KLBQ86Z14 1044 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 LINC00346Q8IVM7 164 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 PARP8Q8N3A8 854 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 RNF148Q8N7C7 305 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 OR52L1Q8NGH7 329 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 OR4K13Q8NH42 304 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 SPTSSAQ969W0 71 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 TECTBQ96PL2 329 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 GPX7Q96SL4 187 aaPredicted RBP10.29□□□□□ -0.76
TRAF4-202ENST00000262396 NMNAT3Q96T66 252 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 RPRD1BQ9NQG5 326 aaKnown RBP10.29□□□□□ -0.76
TRAF4-202ENST00000262396 NDUFAF4Q9P032 175 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 B9D1Q9UPM9 204 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 N6AMT1Q9Y5N5 214 aa10.29□□□□□ -0.76
TRAF4-202ENST00000262396 GGT3PA6NGU5 568 aa10.28□□□□□ -0.76
TRAF4-202ENST00000262396 H0YL77 283 aa10.28□□□□□ -0.76
TRAF4-202ENST00000262396 IMPA2O14732 288 aa10.28□□□□□ -0.76
TRAF4-202ENST00000262396 HLA-DPB1P04440 258 aa10.28□□□□□ -0.76
TRAF4-202ENST00000262396 WNT2P09544 360 aa10.28□□□□□ -0.76
TRAF4-202ENST00000262396 ZNF26P17031 533 aaPredicted RBP10.28□□□□□ -0.76
TRAF4-202ENST00000262396 EGR1P18146 543 aa10.28□□□□□ -0.76
TRAF4-202ENST00000262396 RBMXP38159 391 aaKnown RBP10.28□□□□□ -0.76
TRAF4-202ENST00000262396 OMPP47874 163 aa10.28□□□□□ -0.76
TRAF4-202ENST00000262396 MXRA7P84157 204 aa10.28□□□□□ -0.76
TRAF4-202ENST00000262396 OR8G1Q15617 311 aa10.28□□□□□ -0.76
TRAF4-202ENST00000262396 RFX4Q33E94 735 aa10.28□□□□□ -0.76
TRAF4-202ENST00000262396 GPR157Q5UAW9 335 aa10.28□□□□□ -0.76
TRAF4-202ENST00000262396 BCL6BQ8N143 479 aaPredicted RBP10.28□□□□□ -0.76
TRAF4-202ENST00000262396 PROKR2Q8NFJ6 384 aa10.28□□□□□ -0.76
TRAF4-202ENST00000262396 RAB40AQ8WXH6 277 aa10.28□□□□□ -0.76
TRAF4-202ENST00000262396 DVL3Q92997 716 aaPredicted RBP10.28□□□□□ -0.76
TRAF4-202ENST00000262396 SLCO4A1Q96BD0 722 aa10.28□□□□□ -0.76
TRAF4-202ENST00000262396 PYURFQ96I23 114 aa10.28□□□□□ -0.76
TRAF4-202ENST00000262396 ATF6BQ99941 703 aa10.28□□□□□ -0.76
TRAF4-202ENST00000262396 ELAC2Q9BQ52 826 aaKnown RBP10.28□□□□□ -0.76
TRAF4-202ENST00000262396 ZNF747Q9BV97 191 aa10.28□□□□□ -0.76
TRAF4-202ENST00000262396 OR52D1Q9H346 318 aa10.28□□□□□ -0.76
TRAF4-202ENST00000262396 TNFRSF19Q9NS68 423 aa10.28□□□□□ -0.76
TRAF4-202ENST00000262396 UFSP2Q9NUQ7 469 aa10.28□□□□□ -0.76
TRAF4-202ENST00000262396 WNK2Q9Y3S1 2297 aa10.28□□□□□ -0.76
TRAF4-202ENST00000262396 TRAV40A0A0B4J280 105 aa10.27□□□□□ -0.77
TRAF4-202ENST00000262396 IGHV2-70DA0A0C4DH43 119 aa10.27□□□□□ -0.77
TRAF4-202ENST00000262396 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.27□□□□□ -0.77
TRAF4-202ENST00000262396 A8MXK9 166 aa10.27□□□□□ -0.77
TRAF4-202ENST00000262396 IQCF6A8MYZ5 107 aa10.27□□□□□ -0.77
TRAF4-202ENST00000262396 F5H0A9 414 aaPredicted RBP10.27□□□□□ -0.77
TRAF4-202ENST00000262396 TXNDC12O95881 172 aa10.27□□□□□ -0.77
TRAF4-202ENST00000262396 FSHBP01225 129 aa10.27□□□□□ -0.77
TRAF4-202ENST00000262396 FABP3P05413 133 aa10.27□□□□□ -0.77
TRAF4-202ENST00000262396 IL13RA1P78552 427 aa10.27□□□□□ -0.77
TRAF4-202ENST00000262396 OR8B8Q15620 311 aa10.27□□□□□ -0.77
TRAF4-202ENST00000262396 KCNMB1Q16558 191 aa10.27□□□□□ -0.77
TRAF4-202ENST00000262396 SLC35F1Q5T1Q4 408 aa10.27□□□□□ -0.77
TRAF4-202ENST00000262396 SPATC1Q76KD6 591 aa10.27□□□□□ -0.77
TRAF4-202ENST00000262396 SDR9C7Q8NEX9 313 aa10.27□□□□□ -0.77
TRAF4-202ENST00000262396 OR4C15Q8NGM1 316 aa10.27□□□□□ -0.77
TRAF4-202ENST00000262396 GNPDA2Q8TDQ7 276 aa10.27□□□□□ -0.77
TRAF4-202ENST00000262396 ERGIC1Q969X5 290 aa10.27□□□□□ -0.77
TRAF4-202ENST00000262396 NSMCE2Q96MF7 247 aa10.27□□□□□ -0.77
TRAF4-202ENST00000262396 SIGLEC11Q96RL6 698 aa10.27□□□□□ -0.77
TRAF4-202ENST00000262396 SLC30A2Q9BRI3 323 aa10.27□□□□□ -0.77
TRAF4-202ENST00000262396 NUDT16L1Q9BRJ7 211 aaKnown RBP10.27□□□□□ -0.77
TRAF4-202ENST00000262396 TMEM246Q9BRR3 403 aa10.27□□□□□ -0.77
TRAF4-202ENST00000262396 C1QTNF5Q9BXJ0 243 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms