RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 WNT5BQ9H1J7 359 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 SYT4Q9H2B2 425 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 PLEKHA1Q9HB21 404 aa4.84□□□□□ -1.63
TOPBP1-201ENST00000260810 SCDO00767 359 aa4.84□□□□□ -1.64
TOPBP1-201ENST00000260810 CLDN1O95832 211 aa4.84□□□□□ -1.64
TOPBP1-201ENST00000260810 YES1P07947 543 aa4.84□□□□□ -1.64
TOPBP1-201ENST00000260810 FAM87AP0C7U9 286 aa4.84□□□□□ -1.64
TOPBP1-201ENST00000260810 MMP15P51511 669 aa4.84□□□□□ -1.64
TOPBP1-201ENST00000260810 DCAF7P61962 342 aa4.84□□□□□ -1.64
TOPBP1-201ENST00000260810 PLP2Q04941 152 aa4.84□□□□□ -1.64
TOPBP1-201ENST00000260810 MAB21L1Q13394 359 aa4.84□□□□□ -1.64
TOPBP1-201ENST00000260810 SERTAD2Q14140 314 aa4.84□□□□□ -1.64
TOPBP1-201ENST00000260810 TBCEQ15813 527 aaPredicted RBP4.84□□□□□ -1.64
TOPBP1-201ENST00000260810 C10orf128Q5T292 105 aa4.84□□□□□ -1.64
TOPBP1-201ENST00000260810 SLC6A19Q695T7 634 aa4.84□□□□□ -1.64
TOPBP1-201ENST00000260810 GID4Q8IVV7 300 aa4.84□□□□□ -1.64
TOPBP1-201ENST00000260810 GALNT15Q8N3T1 639 aa4.84□□□□□ -1.64
TOPBP1-201ENST00000260810 DNAAF1Q8NEP3 725 aa4.84□□□□□ -1.64
TOPBP1-201ENST00000260810 DYRK2Q92630 601 aa4.84□□□□□ -1.64
TOPBP1-201ENST00000260810 SLC17A5Q9NRA2 495 aa4.84□□□□□ -1.64
TOPBP1-201ENST00000260810 DIMT1Q9UNQ2 313 aaKnown RBP4.84□□□□□ -1.64
TOPBP1-201ENST00000260810 AQP7P3A6NL99 342 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 ZNF670-ZNF695F2Z2N8 137 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 KDM4BO94953 1096 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 RLN1P04808 185 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 IFNA6P05013 189 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 LAX1Q8IWV1 398 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 OR5W2Q8NH69 310 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 PPP1R35Q8TAP8 253 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 FNDC9Q8TBE3 224 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 FAM81AQ8TBF8 368 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 SNAPC3Q92966 411 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 ABHD17AQ96GS6 310 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 TMEM41AQ96HV5 264 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 COX4I2Q96KJ9 171 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 TMEM185BQ9H7F4 350 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 SEC14L3Q9UDX4 400 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 TMEM14AQ9Y6G1 99 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 ZNF264O43296 627 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 TRMUO75648 421 aaKnown RBP4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 RLN2P04090 185 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 TPOP07202 933 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 IGHV1-2P23083 117 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 ERP29P30040 261 aaKnown RBP4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 FGF9P31371 208 aaPredicted RBP4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 SLC6A6P31641 620 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 SPIBQ01892 262 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 FAM205BPQ63HN1 556 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 PLBD1Q6P4A8 553 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 FAM57BQ71RH2 274 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 OR4D6Q8NGJ1 314 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 RHBDD1Q8TEB9 315 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 GEMIN6Q8WXD5 167 aaKnown RBP4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 C11orf1Q9H5F2 150 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 TXNL4BQ9NX01 149 aaKnown RBP4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 CACFD1Q9UGQ2 172 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 VDAC3Q9Y277 283 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 PEX16Q9Y5Y5 336 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 C2orf92A0A1B0GVN3 265 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 SH3D21A4FU49 640 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 PEX14O75381 377 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 OR7A10O76100 309 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 HEXBP07686 556 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 GSTT2P0CG29 244 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 PET100P0DJ07 73 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 BDH1Q02338 343 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 TMEM154Q6P9G4 183 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 SPATC1Q76KD6 591 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 COX18Q8N8Q8 333 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 OR4K17Q8NGC6 315 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 SPSB4Q96A44 273 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 NXPE2Q96DL1 559 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 C17orf77Q96MU5 243 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 B3GNT4Q9C0J1 378 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 SACM1LQ9NTJ5 587 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 LUZP4Q9P127 313 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 PFDN2Q9UHV9 154 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 DKKL1Q9UK85 242 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 ANKUB1A6NFN9 424 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 CYTIPO60759 359 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 IGKV3-15P01624 115 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 HEXAP06865 529 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 ALAS2P22557 587 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 SLC9A3P48764 834 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 GBX2P52951 348 aaPredicted RBP4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 RGS8P57771 180 aaPredicted RBP4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 SCGB2A2Q13296 93 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 GINS1Q14691 196 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 UTS2BQ765I0 119 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 MISPQ8IVT2 679 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 TEX29Q8N6K0 151 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 AKAP1Q92667 903 aaKnown RBP eCLIP4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 PMM1Q92871 262 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 EIF3KQ9UBQ5 218 aaKnown RBP4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 METRNQ9UJH8 293 aa4.83□□□□□ -1.64
TOPBP1-201ENST00000260810 A0A0G2JMP0 313 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 OR5H15A6NDH6 313 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 ELOA3DA6NLF2 546 aaPredicted RBP4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 ADAP00813 363 aa4.82□□□□□ -1.64
TOPBP1-201ENST00000260810 ZNF20P17024 532 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms