RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 PAQR4Q8N4S7 273 aaPredicted RBP9.03□□□□□ -0.96
COPB1-201ENST00000249923 ACBD4Q8NC06 268 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 APCDD1LQ8NCL9 501 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 BPIFCQ8NFQ6 507 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 STEAP2Q8NFT2 490 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 OR4S1Q8NGB4 309 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 OR10S1Q8NGN2 331 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 OR52N5Q8NH56 324 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 SCARB1Q8WTV0 552 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 CMBLQ96DG6 245 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 TBL1XR1Q9BZK7 514 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 SMIM3Q9BZL3 60 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 RAB33BQ9H082 229 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 APMAPQ9HDC9 416 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 MED29Q9NX70 200 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 LHX6Q9UPM6 363 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 MED19A0JLT2 244 aaPredicted RBP9.03□□□□□ -0.96
COPB1-201ENST00000249923 METTL12A8MUP2 240 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 LMO7DNF2Z398 122 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 CSF1P09603 554 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 PPP3CBP16298 524 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 ZP3P21754 424 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 CD27P26842 260 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 POLR2HP52434 150 aaKnown RBP9.03□□□□□ -0.96
COPB1-201ENST00000249923 FOXK1P85037 733 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 CLINT1Q14677 625 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 C14orf28Q4W4Y0 310 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 SLC18B1Q6NT16 456 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 STEAP1BQ6NZ63 245 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 GKN2Q86XP6 184 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 GTPBP8Q8N3Z3 284 aaPredicted RBP9.03□□□□□ -0.96
COPB1-201ENST00000249923 OR13C8Q8NGS7 320 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 VRK1Q99986 396 aaPredicted RBP9.03□□□□□ -0.96
COPB1-201ENST00000249923 PRR13Q9NZ81 148 aa9.03□□□□□ -0.96
COPB1-201ENST00000249923 TTLL8A6PVC2 850 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 A8MVM7 634 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 SLC33A1O00400 549 aaPredicted RBP9.02□□□□□ -0.97
COPB1-201ENST00000249923 EIF4E2O60573 245 aaKnown RBP9.02□□□□□ -0.97
COPB1-201ENST00000249923 TPPPO94811 219 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 RAB3DO95716 219 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 MT-ATP6P00846 226 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 PRKXP51817 358 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 HSD11B2P80365 405 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 UNC119Q13432 240 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 PCK2Q16822 640 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 CCDC157Q569K6 752 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 TMED6Q8WW62 240 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 SOX7Q9BT81 388 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 FOXQ1Q9C009 403 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 DHDHQ9UQ10 334 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 FAM96BQ9Y3D0 163 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 LOC107986453A0A1B0GWG9 222 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 HSPB2A8KAH6 182 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 TIAF1O95411 115 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 SCGB1D2O95969 90 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 AKAIN1P0CW23 69 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 GLI4P10075 376 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 GABRA1P14867 456 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 FSTP19883 344 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 HTR2CP28335 458 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 AVPR2P30518 371 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 PRSS3P35030 304 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 CSNK1EP49674 416 aaKnown RBP9.02□□□□□ -0.97
COPB1-201ENST00000249923 SLC26A5P58743 744 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 AIMP2Q13155 320 aaKnown RBP9.02□□□□□ -0.97
COPB1-201ENST00000249923 HSPB2Q16082 182 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 PDSS1Q5T2R2 415 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 ZNF660Q6AZW8 331 aaPredicted RBP9.02□□□□□ -0.97
COPB1-201ENST00000249923 LCN10Q6JVE6 187 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 H3F3CQ6NXT2 135 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 TMEM71Q6P5X7 295 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 DCXRQ7Z4W1 244 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 THAP3Q8WTV1 239 aaPredicted RBP9.02□□□□□ -0.97
COPB1-201ENST00000249923 ASB10Q8WXI3 467 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 SLC25A44Q96H78 314 aaPredicted RBP9.02□□□□□ -0.97
COPB1-201ENST00000249923 FN3KRPQ9HA64 309 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 NIT2Q9NQR4 276 aa9.02□□□□□ -0.97
COPB1-201ENST00000249923 LOC390937A0A1W2PQ73 354 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 RAB19A4D1S5 217 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 TMEM235A6NFC5 223 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 PHYHO14832 338 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 B3GALNT1O75752 331 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 CYB5AP00167 134 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 GP1BBP13224 206 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 PGCP20142 388 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 CAPZA1P52907 286 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 PNLIPRP2P54317 469 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 INPP5JQ15735 1006 aaPredicted RBP9.01□□□□□ -0.97
COPB1-201ENST00000249923 RAB30Q15771 203 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 ATPAF1Q5TC12 328 aaPredicted RBP9.01□□□□□ -0.97
COPB1-201ENST00000249923 GRINAQ7Z429 371 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 TMEM17Q86X19 198 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 SLC25A45Q8N413 288 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 D2HGDHQ8N465 521 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 TSTD1Q8NFU3 115 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 OR1J2Q8NGS2 313 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 ASB17Q8WXJ9 295 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 ZNF501Q96CX3 271 aaPredicted RBP9.01□□□□□ -0.97
COPB1-201ENST00000249923 KCNK17Q96T54 332 aa9.01□□□□□ -0.97
COPB1-201ENST00000249923 DPYSL5Q9BPU6 564 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms