RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 PRKXP51817 358 aa12.44□□□□□ -0.42
SDF2-201ENST00000247020 RIN1Q13671 783 aa12.44□□□□□ -0.42
SDF2-201ENST00000247020 ZNF181Q2M3W8 571 aa12.44□□□□□ -0.42
SDF2-201ENST00000247020 EIF2S3LQ2VIR3 472 aaKnown RBP12.44□□□□□ -0.42
SDF2-201ENST00000247020 KRTAP27-1Q3LI81 207 aa12.44□□□□□ -0.42
SDF2-201ENST00000247020 PRSS45Q7RTY3 260 aa12.44□□□□□ -0.42
SDF2-201ENST00000247020 OR8B12Q8NGG6 310 aa12.44□□□□□ -0.42
SDF2-201ENST00000247020 PPP1R14AQ96A00 147 aa12.44□□□□□ -0.42
SDF2-201ENST00000247020 DIRAS2Q96HU8 199 aa12.44□□□□□ -0.42
SDF2-201ENST00000247020 TRIB1Q96RU8 372 aa12.44□□□□□ -0.42
SDF2-201ENST00000247020 SH3GL3Q99963 347 aa12.44□□□□□ -0.42
SDF2-201ENST00000247020 SLC24A3Q9HC58 644 aa12.44□□□□□ -0.42
SDF2-201ENST00000247020 RABL2AQ9UBK7 228 aaPredicted RBP12.44□□□□□ -0.42
SDF2-201ENST00000247020 TUBD1Q9UJT1 453 aa12.44□□□□□ -0.42
SDF2-201ENST00000247020 SPATA2Q9UM82 520 aa12.44□□□□□ -0.42
SDF2-201ENST00000247020 RABL2BQ9UNT1 228 aa12.44□□□□□ -0.42
SDF2-201ENST00000247020 AK6Q9Y3D8 172 aaKnown RBP12.44□□□□□ -0.42
SDF2-201ENST00000247020 V9GYH0 126 aa12.44□□□□□ -0.42
SDF2-201ENST00000247020 ZFHX4Q86UP3 3567 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 ISPDA4D126 451 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 ANXA2P2A6NMY6 339 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 M0R135 149 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 P2RY10O00398 339 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 SYT7O43581 403 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 IGLV3-1P01715 115 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 ANXA2P07355 339 aaKnown RBP12.43□□□□□ -0.42
SDF2-201ENST00000247020 CALCBP10092 127 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 COX5BP10606 129 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 MPGP29372 298 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 MAGEB1P43366 347 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 RANBP1P43487 201 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 EVX1P49640 407 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 TPTEP56180 551 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 ARF1P84077 181 aaKnown RBP12.43□□□□□ -0.42
SDF2-201ENST00000247020 SLC25A35Q3KQZ1 300 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 PLEKHN1Q494U1 663 aaPredicted RBP12.43□□□□□ -0.42
SDF2-201ENST00000247020 ACSF3Q4G176 576 aaPredicted RBP12.43□□□□□ -0.42
SDF2-201ENST00000247020 NSUN5P2Q63ZY6 315 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 XKRXQ6PP77 449 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 FAM180AQ6UWF9 173 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 PLXDC2Q6UX71 529 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 Q6ZSR3 168 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 DOK3Q7L591 496 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 FAM214BQ7L5A3 538 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.43□□□□□ -0.42
SDF2-201ENST00000247020 LUZP2Q86TE4 346 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 SKA3Q8IX90 412 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 OR52H1Q8NGJ2 320 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 OR1F12Q8NHA8 337 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 ZNF799Q96GE5 643 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 GFI1Q99684 422 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 OR2H1Q9GZK4 316 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 SLC25A18Q9H1K4 315 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 ZNF275Q9NSD4 429 aaPredicted RBP12.43□□□□□ -0.42
SDF2-201ENST00000247020 ZNF391Q9UJN7 358 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 TP53TG5Q9Y2B4 290 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 DOCK7Q96N67 2140 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 TRAV8-7A0A075B6U6 113 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 A0A1B0GTI1 187 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 FABP12A6NFH5 140 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 K7EM74 188 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 HPGDSO60760 199 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 WDR1O75083 606 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 UPK1BO75841 260 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 HOXD4P09016 255 aaPredicted RBP12.43□□□□□ -0.42
SDF2-201ENST00000247020 CD37P11049 281 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 ATF1P18846 271 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 PSG4Q00888 419 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 BTLAQ7Z6A9 289 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 UBE2J2Q8N2K1 259 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 NKAIN3Q8N8D7 197 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 GDPD1Q8N9F7 314 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 PLPP7Q8NBV4 271 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 OR6K3Q8NGY3 331 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 TRMT10AQ8TBZ6 339 aaKnown RBP12.43□□□□□ -0.42
SDF2-201ENST00000247020 C10orf35Q96D05 121 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 PGAM5Q96HS1 289 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 SOSTQ9BQB4 213 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 BRD7Q9NPI1 651 aa12.43□□□□□ -0.42
SDF2-201ENST00000247020 CACNA1GO43497 2377 aa12.42□□□□□ -0.42
SDF2-201ENST00000247020 FREM1Q5H8C1 2179 aa12.42□□□□□ -0.42
SDF2-201ENST00000247020 MBD3L4A6NDZ8 208 aaPredicted RBP12.42□□□□□ -0.42
SDF2-201ENST00000247020 MBD3L3A6NE82 208 aaPredicted RBP12.42□□□□□ -0.42
SDF2-201ENST00000247020 MBD3L5A6NJ08 208 aaPredicted RBP12.42□□□□□ -0.42
SDF2-201ENST00000247020 IGHV3-9P01782 118 aa12.42□□□□□ -0.42
SDF2-201ENST00000247020 APOA1P02647 267 aa12.42□□□□□ -0.42
SDF2-201ENST00000247020 CRHP06850 196 aa12.42□□□□□ -0.42
SDF2-201ENST00000247020 ADRA2CP18825 462 aa12.42□□□□□ -0.42
SDF2-201ENST00000247020 ARR3P36575 388 aa12.42□□□□□ -0.42
SDF2-201ENST00000247020 ID4P47928 161 aa12.42□□□□□ -0.42
SDF2-201ENST00000247020 GALK2Q01415 458 aa12.42□□□□□ -0.42
SDF2-201ENST00000247020 FAPQ12884 760 aa12.42□□□□□ -0.42
SDF2-201ENST00000247020 RSPO1Q2MKA7 263 aaPredicted RBP12.42□□□□□ -0.42
SDF2-201ENST00000247020 ZNF324BQ6AW86 544 aaPredicted RBP12.42□□□□□ -0.42
SDF2-201ENST00000247020 ANKRD16Q6P6B7 361 aa12.42□□□□□ -0.42
SDF2-201ENST00000247020 FAM131AQ6UXB0 335 aa12.42□□□□□ -0.42
SDF2-201ENST00000247020 FAM57BQ71RH2 274 aa12.42□□□□□ -0.42
SDF2-201ENST00000247020 SERPINA12Q8IW75 414 aa12.42□□□□□ -0.42
SDF2-201ENST00000247020 ZNF433Q8N7K0 673 aaPredicted RBP12.42□□□□□ -0.42
SDF2-201ENST00000247020 MBD3L2Q8NHZ7 208 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms