RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 CFAP77Q6ZQR2 320 aa14.35□□□□□ -0.11
UBE3D-201ENST00000237186 GPAT4Q86UL3 456 aa14.35□□□□□ -0.11
UBE3D-201ENST00000237186 GABRG1Q8N1C3 465 aa14.35□□□□□ -0.11
UBE3D-201ENST00000237186 OR8H1Q8NGG4 311 aa14.35□□□□□ -0.11
UBE3D-201ENST00000237186 OR5D14Q8NGL3 314 aa14.35□□□□□ -0.11
UBE3D-201ENST00000237186 OR2AJ1Q8NGZ0 328 aa14.35□□□□□ -0.11
UBE3D-201ENST00000237186 PAQR8Q8TEZ7 354 aa14.35□□□□□ -0.11
UBE3D-201ENST00000237186 NKX3-1Q99801 234 aaPredicted RBP14.35□□□□□ -0.11
UBE3D-201ENST00000237186 PROK2Q9HC23 129 aa14.35□□□□□ -0.11
UBE3D-201ENST00000237186 FBLN5Q9UBX5 448 aa14.35□□□□□ -0.11
UBE3D-201ENST00000237186 ZNF69Q9UC07 566 aa14.35□□□□□ -0.11
UBE3D-201ENST00000237186 ZNF726A6NNF4 738 aa14.34□□□□□ -0.11
UBE3D-201ENST00000237186 PATE3B3GLJ2 98 aa14.34□□□□□ -0.11
UBE3D-201ENST00000237186 RAMP1O60894 148 aa14.34□□□□□ -0.11
UBE3D-201ENST00000237186 CELA2AP08217 269 aa14.34□□□□□ -0.11
UBE3D-201ENST00000237186 NR2C1P13056 603 aa14.34□□□□□ -0.11
UBE3D-201ENST00000237186 QRFPP83859 136 aa14.34□□□□□ -0.11
UBE3D-201ENST00000237186 PMPCAQ10713 525 aa14.34□□□□□ -0.11
UBE3D-201ENST00000237186 SLC22A24Q8N4F4 322 aa14.34□□□□□ -0.11
UBE3D-201ENST00000237186 UXS1Q8NBZ7 420 aa14.34□□□□□ -0.11
UBE3D-201ENST00000237186 OR1M1Q8NGA1 313 aa14.34□□□□□ -0.11
UBE3D-201ENST00000237186 OR51S1Q8NGJ8 323 aa14.34□□□□□ -0.11
UBE3D-201ENST00000237186 AQP3Q92482 292 aa14.34□□□□□ -0.11
UBE3D-201ENST00000237186 ADAT3Q96EY9 351 aaPredicted RBP14.34□□□□□ -0.11
UBE3D-201ENST00000237186 TMPRSS13Q9BYE2 586 aa14.34□□□□□ -0.11
UBE3D-201ENST00000237186 CNTD2Q9H8S5 307 aa14.34□□□□□ -0.11
UBE3D-201ENST00000237186 SEC61A2Q9H9S3 476 aa14.34□□□□□ -0.11
UBE3D-201ENST00000237186 PNRC2Q9NPJ4 139 aaKnown RBP14.34□□□□□ -0.11
UBE3D-201ENST00000237186 ZDBF2Q9HCK1 2354 aa14.34□□□□□ -0.11
UBE3D-201ENST00000237186 UBE2QL1A1L167 161 aa14.33□□□□□ -0.11
UBE3D-201ENST00000237186 METTL21EPA6NDL7 271 aa14.33□□□□□ -0.11
UBE3D-201ENST00000237186 TLX3O43711 291 aaPredicted RBP14.33□□□□□ -0.11
UBE3D-201ENST00000237186 VAMP5O95183 116 aa14.33□□□□□ -0.11
UBE3D-201ENST00000237186 BPNT1O95861 308 aa14.33□□□□□ -0.11
UBE3D-201ENST00000237186 CD74P04233 296 aa14.33□□□□□ -0.11
UBE3D-201ENST00000237186 ITGB2P05107 769 aa14.33□□□□□ -0.11
UBE3D-201ENST00000237186 CTSSP25774 331 aa14.33□□□□□ -0.11
UBE3D-201ENST00000237186 SFTPDP35247 375 aa14.33□□□□□ -0.11
UBE3D-201ENST00000237186 ZNF133P52736 654 aaPredicted RBP14.33□□□□□ -0.11
UBE3D-201ENST00000237186 DSCR4P56555 118 aaPredicted RBP14.33□□□□□ -0.11
UBE3D-201ENST00000237186 POU4F3Q15319 338 aa14.33□□□□□ -0.11
UBE3D-201ENST00000237186 SLC23A3Q6PIS1 610 aa14.33□□□□□ -0.11
UBE3D-201ENST00000237186 ZNF627Q7L945 461 aa14.33□□□□□ -0.11
UBE3D-201ENST00000237186 ZNF680Q8NEM1 530 aa14.33□□□□□ -0.11
UBE3D-201ENST00000237186 OR1J2Q8NGS2 313 aa14.33□□□□□ -0.11
UBE3D-201ENST00000237186 SLC25A21Q9BQT8 299 aaPredicted RBP14.33□□□□□ -0.11
UBE3D-201ENST00000237186 NUDT16L1Q9BRJ7 211 aaKnown RBP14.33□□□□□ -0.11
UBE3D-201ENST00000237186 CA10Q9NS85 328 aa14.33□□□□□ -0.11
UBE3D-201ENST00000237186 SLC5A6Q9Y289 635 aa14.33□□□□□ -0.11
UBE3D-201ENST00000237186 MUC3AQ02505 3323 aa14.33□□□□□ -0.11
UBE3D-201ENST00000237186 RAB27BO00194 218 aa14.33□□□□□ -0.12
UBE3D-201ENST00000237186 TNFRSF10AO00220 468 aa14.33□□□□□ -0.12
UBE3D-201ENST00000237186 ZIC3O60481 467 aa14.33□□□□□ -0.12
UBE3D-201ENST00000237186 EIF1BO60739 113 aaKnown RBP14.33□□□□□ -0.12
UBE3D-201ENST00000237186 QDPRP09417 244 aa14.33□□□□□ -0.12
UBE3D-201ENST00000237186 CCL1P22362 96 aa14.33□□□□□ -0.12
UBE3D-201ENST00000237186 EIF1AXP47813 144 aaKnown RBP14.33□□□□□ -0.12
UBE3D-201ENST00000237186 GSK3AP49840 483 aa14.33□□□□□ -0.12
UBE3D-201ENST00000237186 SSR4P51571 173 aa14.33□□□□□ -0.12
UBE3D-201ENST00000237186 LSM6P62312 80 aaKnown RBP14.33□□□□□ -0.12
UBE3D-201ENST00000237186 PAQR4Q8N4S7 273 aaPredicted RBP14.33□□□□□ -0.12
UBE3D-201ENST00000237186 TMEM105Q8N8V8 129 aa14.33□□□□□ -0.12
UBE3D-201ENST00000237186 MYOZ1Q9NP98 299 aaPredicted RBP14.33□□□□□ -0.12
UBE3D-201ENST00000237186 EIF3KQ9UBQ5 218 aaKnown RBP14.33□□□□□ -0.12
UBE3D-201ENST00000237186 UPB1Q9UBR1 384 aa14.33□□□□□ -0.12
UBE3D-201ENST00000237186 PLSCR5A0PG75 271 aa14.32□□□□□ -0.12
UBE3D-201ENST00000237186 SCGNO76038 276 aa14.32□□□□□ -0.12
UBE3D-201ENST00000237186 SLC22A5O76082 557 aa14.32□□□□□ -0.12
UBE3D-201ENST00000237186 ERCC1P07992 297 aaPredicted RBP14.32□□□□□ -0.12
UBE3D-201ENST00000237186 CCL3P10147 92 aa14.32□□□□□ -0.12
UBE3D-201ENST00000237186 LIFP15018 202 aa14.32□□□□□ -0.12
UBE3D-201ENST00000237186 RAB3AP20336 220 aa14.32□□□□□ -0.12
UBE3D-201ENST00000237186 CDAP32320 146 aa14.32□□□□□ -0.12
UBE3D-201ENST00000237186 MLF1P58340 268 aa14.32□□□□□ -0.12
UBE3D-201ENST00000237186 MOGAT2Q3SYC2 334 aa14.32□□□□□ -0.12
UBE3D-201ENST00000237186 ZNF260Q3ZCT1 412 aa14.32□□□□□ -0.12
UBE3D-201ENST00000237186 RPS19BP1Q86WX3 136 aaKnown RBP14.32□□□□□ -0.12
UBE3D-201ENST00000237186 OR52N4Q8NGI2 321 aa14.32□□□□□ -0.12
UBE3D-201ENST00000237186 CDCP1Q9H5V8 836 aa14.32□□□□□ -0.12
UBE3D-201ENST00000237186 ASH2LQ9UBL3 628 aa14.32□□□□□ -0.12
UBE3D-201ENST00000237186 POLR1DQ9Y2S0 133 aa14.32□□□□□ -0.12
UBE3D-201ENST00000237186 MEIS3P1A6NDR6 274 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 B4E171 279 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 M0R296 226 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 RAB3DO95716 219 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 IGHEP01854 428 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 KLK2P20151 261 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 GNALP38405 381 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 TSPAN7P41732 249 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 ZNF81P51508 661 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 TRIM61Q5EBN2 209 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 C10orf128Q5T292 105 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 OR10K2Q6IF99 312 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 FOXL2NBQ6ZUU3 175 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 DTWD2Q8NBA8 298 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 ASB13Q8WXK3 278 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 DVL3Q92997 716 aaPredicted RBP14.31□□□□□ -0.12
UBE3D-201ENST00000237186 TMEM54Q969K7 222 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 EDEM2Q9BV94 578 aa14.31□□□□□ -0.12
UBE3D-201ENST00000237186 GLTPQ9NZD2 209 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms