RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 RPL12P30050 165 aaKnown RBP12.15□□□□□ -0.46
NEK4-201ENST00000233027 AGFG1P52594 562 aaKnown RBP12.15□□□□□ -0.46
NEK4-201ENST00000233027 TAF9Q16594 264 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 CT45A2Q5DJT8 189 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 CT45A1Q5HYN5 189 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 FAM58AQ8N1B3 248 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 LFNGQ8NES3 379 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 CT45A3Q8NHU0 189 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 TSPAN12O95859 305 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 RUNX2Q13950 521 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 INSL4Q14641 139 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 C4orf17Q53FE4 359 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 FBXL6Q8N531 539 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 OR4C16Q8NGL9 310 aa12.15□□□□□ -0.46
NEK4-201ENST00000233027 NRAPQ86VF7 1730 aa12.15□□□□□ -0.47
NEK4-201ENST00000233027 DEFA4P12838 97 aa12.15□□□□□ -0.47
NEK4-201ENST00000233027 CLEC12BQ2HXU8 276 aa12.15□□□□□ -0.47
NEK4-201ENST00000233027 TMEM268Q5VZI3 342 aa12.15□□□□□ -0.47
NEK4-201ENST00000233027 OR2AK2Q8NG84 335 aa12.15□□□□□ -0.47
NEK4-201ENST00000233027 OR8U1Q8NH10 309 aa12.15□□□□□ -0.47
NEK4-201ENST00000233027 FGF20Q9NP95 211 aaPredicted RBP12.15□□□□□ -0.47
NEK4-201ENST00000233027 R4GMQ9 66 aa12.15□□□□□ -0.47
NEK4-201ENST00000233027 ITGB4P16144 1822 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 POU3F3P20264 500 aaPredicted RBP12.14□□□□□ -0.47
NEK4-201ENST00000233027 ZNF85Q03923 595 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 OR8G1Q15617 311 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 PLAC9Q5JTB6 97 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 ZNF626Q68DY1 528 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 RPUSD3Q6P087 351 aaKnown RBP12.14□□□□□ -0.47
NEK4-201ENST00000233027 OR4F5Q8NH21 305 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 OR4F4Q96R69 305 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 S1PR5Q9H228 398 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 SSUH2Q9Y2M2 353 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 N4BP2Q86UW6 1770 aaPredicted RBP12.14□□□□□ -0.47
NEK4-201ENST00000233027 A0A1B0GUH1 482 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 LRP3O75074 770 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 B4GALNT1Q00973 533 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 LINC00303Q3SY05 128 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 LAIR1Q6GTX8 287 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 MAMSTRQ6ZN01 415 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 EDAQ92838 391 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 C10orf90Q96M02 699 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 JAM3Q9BX67 310 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 SLC23A1Q9UHI7 598 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 GPR171O14626 319 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 TNFSF11O14788 317 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 TAAR5O14804 337 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 JTBO76095 146 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 TBXA2RP21731 343 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 CD27P26842 260 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 FLI1Q01543 452 aaPredicted RBP12.14□□□□□ -0.47
NEK4-201ENST00000233027 SLC17A1Q14916 467 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 EXT1Q16394 746 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 AGBL4Q5VU57 503 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 FBXO4Q9UKT5 387 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 ECM29Q5VYK3 1845 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 C5orf49A4QMS7 147 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 NKX6-3A6NJ46 265 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 AKR1C3P42330 323 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 GNB1P62873 340 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 NKAIN1Q4KMZ8 207 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 THEM4Q5T1C6 240 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 THNSL2Q86YJ6 484 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 SYS1Q8N2H4 156 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 ANKRD53Q8N9V6 530 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 HLA-CQ95604 372 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 WDR89Q96FK6 387 aaPredicted RBP12.14□□□□□ -0.47
NEK4-201ENST00000233027 MED18Q9BUE0 208 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 GNB4Q9HAV0 340 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 TMEFF2Q9UIK5 374 aaPredicted RBP12.14□□□□□ -0.47
NEK4-201ENST00000233027 ALS2Q96Q42 1657 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 TRBV5-4A0A0C4DH59 114 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 SEMG1P04279 462 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 EPXP11678 715 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 GSK3AP49840 483 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 SELENBP1Q13228 472 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 HES1Q14469 280 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 PHYHD1Q5SRE7 291 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 PRAMEF5Q5TYX0 476 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 PRAMEF6Q5VXH4 476 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 RDH5Q92781 318 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 SIGLEC11Q96RL6 698 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 MAGT1Q9H0U3 335 aa12.14□□□□□ -0.47
NEK4-201ENST00000233027 M0R135 149 aa12.13□□□□□ -0.47
NEK4-201ENST00000233027 HYAL3O43820 417 aaPredicted RBP12.13□□□□□ -0.47
NEK4-201ENST00000233027 S100A7AQ86SG5 101 aa12.13□□□□□ -0.47
NEK4-201ENST00000233027 CMTM2Q8TAZ6 248 aa12.13□□□□□ -0.47
NEK4-201ENST00000233027 CNRIP1Q96F85 164 aaPredicted RBP12.13□□□□□ -0.47
NEK4-201ENST00000233027 ZNF799Q96GE5 643 aa12.13□□□□□ -0.47
NEK4-201ENST00000233027 RTL8AQ9BWD3 113 aa12.13□□□□□ -0.47
NEK4-201ENST00000233027 DEFB127Q9H1M4 99 aa12.13□□□□□ -0.47
NEK4-201ENST00000233027 TOGARAM1Q9Y4F4 1720 aa12.13□□□□□ -0.47
NEK4-201ENST00000233027 ZNF891A8MT65 544 aaPredicted RBP12.13□□□□□ -0.47
NEK4-201ENST00000233027 ADRA2CP18825 462 aa12.13□□□□□ -0.47
NEK4-201ENST00000233027 LHFPL2Q6ZUX7 228 aa12.13□□□□□ -0.47
NEK4-201ENST00000233027 APH1BQ8WW43 257 aa12.13□□□□□ -0.47
NEK4-201ENST00000233027 LRFN5Q96NI6 719 aa12.13□□□□□ -0.47
NEK4-201ENST00000233027 BCL2L10Q9HD36 194 aa12.13□□□□□ -0.47
NEK4-201ENST00000233027 SHROOM3Q8TF72 1996 aa12.13□□□□□ -0.47
NEK4-201ENST00000233027 BTAF1O14981 1849 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms