RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 RPL22L1Q6P5R6 122 aaKnown RBP12.38□□□□□ -0.43
SIX4-201ENST00000216513 BAIAP2L2Q6UXY1 529 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 UBAC2Q8NBM4 344 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 GIMAP1Q8WWP7 306 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 INPP5EQ9NRR6 644 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 GPATCH2Q9NW75 528 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 CCSO14618 274 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 ALPLP05186 524 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 SDHAP31040 664 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 RAB13P51153 203 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 KIRREL2Q6UWL6 708 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 NOXO1Q8NFA2 376 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 PTPMT1Q8WUK0 201 aaPredicted RBP12.38□□□□□ -0.43
SIX4-201ENST00000216513 ZNF225Q9UK10 706 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 HSPE1-MOB4S4R3N1 261 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 A0A1B0GUH1 482 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 PRSS12P56730 875 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 SFRP5Q5T4F7 317 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 OR6F1Q8NGZ6 308 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 LGALS14Q8TCE9 139 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 ZNF501Q96CX3 271 aaPredicted RBP12.38□□□□□ -0.43
SIX4-201ENST00000216513 ADAT1Q9BUB4 502 aaKnown RBP12.38□□□□□ -0.43
SIX4-201ENST00000216513 MRPL22Q9NWU5 206 aaKnown RBP12.38□□□□□ -0.43
SIX4-201ENST00000216513 KCNE3Q9Y6H6 103 aa12.38□□□□□ -0.43
SIX4-201ENST00000216513 F5H5P2 479 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 XRCC2O43543 280 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 COX7A1P24310 79 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 RAC1P63000 192 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 SHBQ15464 509 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 HEPHL1Q6MZM0 1159 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 ZNF573Q86YE8 665 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 KTI12Q96EK9 354 aaPredicted RBP12.37□□□□□ -0.43
SIX4-201ENST00000216513 UBL7Q96S82 380 aaPredicted RBP12.37□□□□□ -0.43
SIX4-201ENST00000216513 SHARPINQ9H0F6 387 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 NRASP01111 189 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 RBP2P50120 134 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 UBE2MP61081 183 aaKnown RBP12.37□□□□□ -0.43
SIX4-201ENST00000216513 OR2B11Q5JQS5 317 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 GABRG1Q8N1C3 465 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 PLPP5Q8NEB5 264 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 TMEM106AQ96A25 262 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 GPANK1O95872 356 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 HIST1H1CP16403 213 aaKnown RBP12.37□□□□□ -0.43
SIX4-201ENST00000216513 HTR2AP28223 471 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 HAAOP46952 286 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 PRICKLE4Q2TBC4 344 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 DOK3Q7L591 496 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 TMEM217Q8N7C4 229 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 GHSRQ92847 366 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 SULT4A1Q9BR01 284 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 HLA-HP01893 362 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 SEMG1P04279 462 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 GNB3P16520 340 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 NAGAP17050 411 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 ELFN2Q5R3F8 820 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 AKR1C8PQ5T2L2 129 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 TAAR8Q969N4 342 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 TM4SF19Q96DZ7 209 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 RAB3CQ96E17 227 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 LIN37Q96GY3 246 aaPredicted RBP12.37□□□□□ -0.43
SIX4-201ENST00000216513 COL25A1Q9BXS0 654 aaPredicted RBP12.37□□□□□ -0.43
SIX4-201ENST00000216513 UBQLN3Q9H347 655 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 MYOZ1Q9NP98 299 aaPredicted RBP12.37□□□□□ -0.43
SIX4-201ENST00000216513 A0A0B4J2A0 478 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 RPS2P15880 293 aaKnown RBP12.37□□□□□ -0.43
SIX4-201ENST00000216513 CDK2P24941 298 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 OR2T2Q6IF00 324 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 ALKAL2Q6UX46 152 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 SLC36A1Q7Z2H8 476 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 PDZD9Q8IXQ8 264 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 FRZBQ92765 325 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 C19orf43Q9BQ61 176 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 SHPKQ9UHJ6 478 aa12.37□□□□□ -0.43
SIX4-201ENST00000216513 A0A087WUJ7 227 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 A0A1W2PQM1 296 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 IL13RA1P78552 427 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 GAB4Q2WGN9 574 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 UNQ6494/PRO21346Q6UXR6 183 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 OR56B1Q8NGI3 324 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 OR4C3Q8NH37 302 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 PLPPR2Q96GM1 343 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 AMDHD2Q9Y303 409 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 PRSS37A4D1T9 235 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 GAAP10253 952 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 TXNIPQ9H3M7 391 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 MMP25Q9NPA2 562 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 GLTPQ9NZD2 209 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 APEX1P27695 318 aaKnown RBP12.36□□□□□ -0.43
SIX4-201ENST00000216513 MICBQ29980 383 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 RTL6Q6ICC9 239 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 Q6ZTK2 550 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 MZB1Q8WU39 189 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 GATA6Q92908 595 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 ABHD17AQ96GS6 310 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 IKZF5Q9H5V7 419 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 KLK13Q9UKR3 277 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 TDRD15B5MCY1 1934 aaKnown RBP12.36□□□□□ -0.43
SIX4-201ENST00000216513 ZIC1Q15915 447 aa12.36□□□□□ -0.43
SIX4-201ENST00000216513 FAHD2BQ6P2I3 314 aaPredicted RBP12.36□□□□□ -0.43
SIX4-201ENST00000216513 LSRQ86X29 649 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 295.5 ms