RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 HIST2H3PS2Q5TEC6 136 aa13.34□□□□□ -0.27
TMEM38A-201ENST00000187762 RPL7L1Q6DKI1 246 aaKnown RBP13.34□□□□□ -0.27
TMEM38A-201ENST00000187762 ZNF836Q6ZNA1 936 aa13.34□□□□□ -0.27
TMEM38A-201ENST00000187762 MTSS1LQ765P7 747 aa13.34□□□□□ -0.27
TMEM38A-201ENST00000187762 BEND2Q8NDZ0 799 aa13.34□□□□□ -0.27
TMEM38A-201ENST00000187762 AMDHD2Q9Y303 409 aa13.34□□□□□ -0.27
TMEM38A-201ENST00000187762 DOCK8Q8NF50 2099 aa13.34□□□□□ -0.27
TMEM38A-201ENST00000187762 PRR19A6NJB7 356 aa13.34□□□□□ -0.27
TMEM38A-201ENST00000187762 ZNF724A8MTY0 619 aa13.34□□□□□ -0.27
TMEM38A-201ENST00000187762 PRR32B1ATL7 298 aa13.34□□□□□ -0.27
TMEM38A-201ENST00000187762 CDC40O60508 579 aaKnown RBP eCLIP13.34□□□□□ -0.27
TMEM38A-201ENST00000187762 CYB5AP00167 134 aa13.34□□□□□ -0.27
TMEM38A-201ENST00000187762 SRSF5Q13243 272 aaKnown RBP13.34□□□□□ -0.27
TMEM38A-201ENST00000187762 CEBPEQ15744 281 aa13.34□□□□□ -0.27
TMEM38A-201ENST00000187762 RNASE10Q5GAN6 216 aaKnown RBP13.34□□□□□ -0.27
TMEM38A-201ENST00000187762 MFSD12Q6NUT3 480 aa13.34□□□□□ -0.27
TMEM38A-201ENST00000187762 CDK20Q8IZL9 346 aa13.34□□□□□ -0.27
TMEM38A-201ENST00000187762 OR4K13Q8NH42 304 aa13.34□□□□□ -0.27
TMEM38A-201ENST00000187762 OR10J5Q8NHC4 309 aa13.34□□□□□ -0.27
TMEM38A-201ENST00000187762 LYPD6BQ8NI32 183 aa13.34□□□□□ -0.27
TMEM38A-201ENST00000187762 Q96M85 177 aa13.34□□□□□ -0.27
TMEM38A-201ENST00000187762 SPOCK3Q9BQ16 436 aa13.34□□□□□ -0.27
TMEM38A-201ENST00000187762 SLC5A7Q9GZV3 580 aa13.34□□□□□ -0.27
TMEM38A-201ENST00000187762 CRLF2Q9HC73 371 aa13.34□□□□□ -0.27
TMEM38A-201ENST00000187762 TBC1D29Q9UFV1 150 aa13.34□□□□□ -0.27
TMEM38A-201ENST00000187762 TMED7Q9Y3B3 224 aa13.34□□□□□ -0.27
TMEM38A-201ENST00000187762 PHOX2AO14813 284 aa13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 RPP14O95059 124 aaKnown RBP13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 IL2RGP31785 369 aa13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 EIF5AP63241 154 aaKnown RBP13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 ODF4Q2M2E3 257 aa13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 EXOSC6Q5RKV6 272 aaKnown RBP13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 ZNF529Q6P280 563 aa13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 ARHGAP11AQ6P4F7 1023 aa13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 BHLHE23Q8NDY6 225 aa13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 CD300LFQ8TDQ1 290 aa13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 SLC25A43Q8WUT9 341 aaPredicted RBP13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 ZNRF4Q8WWF5 429 aa13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 ROBO4Q8WZ75 1007 aa13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 NOL4LQ96MY1 436 aaPredicted RBP13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 AQP10Q96PS8 301 aa13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 WNT5BQ9H1J7 359 aa13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 OR5AC2Q9NZP5 309 aa13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 TMED3Q9Y3Q3 217 aa13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 NPIPA5A0A0B4J1W7 369 aa13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 TRBV5-5A0A0J9YX44 114 aa13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 NPIPA7E9PJI5 369 aa13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 NPIPA8P0DM63 369 aa13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 GRPRP30550 384 aa13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 EBPQ15125 230 aaKnown RBP13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 GUK1Q16774 197 aa13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 C14orf28Q4W4Y0 310 aa13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 RD3Q7Z3Z2 195 aa13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 TMEFF1Q8IYR6 380 aa13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 KXD1Q9BQD3 176 aa13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 APOOQ9BUR5 198 aa13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 SCRT1Q9BWW7 348 aa13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 PRODH2Q9UF12 536 aa13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 WDR45Q9Y484 360 aa13.33□□□□□ -0.28
TMEM38A-201ENST00000187762 A0A1W2PPC1 479 aa13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 ZNF860A6NHJ4 632 aa13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 C5orf67F2Z3F1 127 aa13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 CYTIPO60759 359 aa13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 PTBP3O95758 552 aaKnown RBP13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 ADH1BP00325 375 aa13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 ZNF25P17030 456 aaPredicted RBP13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 SNCAP37840 140 aa13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 CX3CR1P49238 355 aa13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 HNRNPKP61978 463 aaKnown RBP eCLIP13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 RPS21P63220 83 aaKnown RBP13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 C2orf76Q3KRA6 126 aa13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 DEFB134Q4QY38 66 aa13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 OR5AK2Q8NH90 309 aa13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 CCL4L1Q8NHW4 92 aa13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 CCDC74AQ96AQ1 378 aa13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 MUCL1Q96DR8 90 aa13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 OPN3Q9H1Y3 402 aaPredicted RBP13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 FBXO34Q9NWN3 711 aa13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 DNAJB11Q9UBS4 358 aa13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 LYPD3O95274 346 aa13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 TSPAN15O95858 294 aa13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 GPANK1O95872 356 aa13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 F13BP05160 661 aa13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 POU2F2P09086 479 aa13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 HIST1H1CP16403 213 aaKnown RBP13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 PBX2P40425 430 aa13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 NKX6-1P78426 367 aaPredicted RBP13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 CYCSP99999 105 aaKnown RBP13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 TRMT12Q53H54 448 aaKnown RBP13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 COL13A1Q5TAT6 717 aaPredicted RBP13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 PRSS54Q6PEW0 395 aa13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 C5orf24Q7Z6I8 188 aa13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 CD163Q86VB7 1156 aa13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 RANBP3LQ86VV4 465 aaPredicted RBP13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 LRRC25Q8N386 305 aaPredicted RBP13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 MRGPRFQ96AM1 343 aa13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 TNFRSF13CQ96RJ3 184 aa13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 DDA1Q9BW61 102 aa13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 C19orf12Q9NSK7 152 aa13.32□□□□□ -0.28
TMEM38A-201ENST00000187762 TMEM235A6NFC5 223 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms