RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Olfr173E9QAT7 321 aa15.33■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Pcdh1F7BJK1 1077 aa15.33■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 BC100530Q497J0 97 aa15.33■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Btn1a1Q62556 524 aa15.33■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 QdprQ8BVI4 241 aa15.33■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Tmem198bQ8CFU0 350 aa15.33■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Treml1Q8K558 317 aa15.33■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr830Q8VFJ5 315 aa15.33■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Acer3Q9D099 267 aa15.33■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Gm9817Q9D2M0 144 aa15.33■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 AunipE9Q6Z5 340 aa15.33■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Runx3Q64131 409 aa15.33■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Fbxo22Q78JE5 402 aa15.33■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Plekhh3Q8VCE9 796 aa15.33■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Timm8a1Q9WVA2 97 aa15.33■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Plxnb2B2RXS4 1842 aa15.33■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 4930433I11RikA0A0U1RPT6 723 aa15.33■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr623E9Q382 317 aa15.33■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Vmn1r129E9QA94 307 aa15.33■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Gm8720K9J7F4 307 aa15.33■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Ext1P97464 746 aa15.33■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Pdlim7Q3TJD7 457 aa15.33■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Fa2hQ5MPP0 372 aa15.33■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Adora3Q61618 319 aa15.33■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Zic2Q62520 530 aa15.33■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Egln1Q91YE3 400 aa15.33■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Tmem269Q9D4Y8 254 aa15.33■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Klrk1O54709 232 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Cbr2P08074 244 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Cr1lQ64735 483 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr996Q7TRA0 314 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Tacstd2Q8BGV3 317 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 StradbQ8K4T3 418 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr272Q8VGA0 319 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Fam3cQ91VU0 227 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 PipoxQ9D826 390 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Nkx2-4Q9EQM3 354 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Tln2Q71LX4 2375 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Gm21812J3QN84 227 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Ube2g1P62254 170 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Gpr26Q8BZA7 337 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 NotumQ8R116 503 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Duoxa1Q8VE49 341 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Ceacam3E9Q6J4 706 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Arrdc5Q497K5 325 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Gjc2Q8BQU6 440 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 CalyQ9DCA7 226 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Plxna1P70206 1894 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Kcnk15B2RVL1 343 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Gm15130F6PYN5 206 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Hoxd12P23812 268 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 RorcP51450 516 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Cox8aQ64445 69 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Ankrd46Q8BTZ5 228 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Coro2aQ8C0P5 524 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Shisa4Q8CA71 197 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Prpmp5E9PXN1 296 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Cxcl5P50228 132 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 CdaP56389 146 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Tox4Q8BU11 619 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Tsen54Q8C2A2 525 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr1170Q8VFG1 316 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Insm2Q9JMC2 493 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Gm5141A0A0J9YUW3 581 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr231E9Q0M4 307 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr555E9Q547 315 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Gpr50O88495 591 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Adipor2Q8BQS5 386 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Gm21411J3KMS0 136 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Dvl1P51141 695 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 CpeQ00493 476 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Vmn1r195Q5SVD6 316 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Cd6Q61003 665 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Mrgpra6Q91ZC6 301 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Cyb5r1Q9DB73 305 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 NgbQ9ER97 151 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Minpp1Q9Z2L6 481 aa15.32■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Zfp760E9QAF5 666 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Adat3Q6PAT0 349 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Mboat1Q8BH98 492 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Gpr157Q8C206 330 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 FkrpQ8CG64 494 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 CrygnQ8VHL5 183 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Ddb2Q99J79 432 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Dock3Q8CIQ7 2027 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Zfp820E9Q5G8 549 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Gm6576F6YTZ4 274 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Twist1P26687 206 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 SnrpbP27048 231 aaKnown RBP15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Acp5Q05117 327 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 DraxinQ6PAL1 343 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 6030452D12RikQ8CD33 222 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Pex12Q8VC48 359 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr827Q8VEV5 322 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Plscr3Q9JIZ9 296 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 TaglnP37804 201 aaKnown RBP15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Atp5j2P56135 88 aaKnown RBP15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Agbl5Q09M02 886 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Vmn1r59Q8R2B9 310 aa15.31■□□□□ 0.04
Ccdc88a-201ENSMUST00000040182 Olfr460Q8VF31 314 aa15.31■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms