RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 HgdO09173 445 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 P01800 113 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Muc13P19467 573 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Drd3P30728 446 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Sstr2P30875 369 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Limk1P53668 647 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 ShbQ6PD21 503 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Tdpoz5Q6YCH1 340 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Lix1lQ8BQ89 337 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Calhm2Q8VEC4 323 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Steap4Q923B6 470 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Smim3Q99PE5 60 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Nkain1Q9D035 207 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Tmem27Q9ESG4 222 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Gal3st1Q9JHE4 423 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Kcnd3Q9Z0V1 655 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Vmn1r82A0A087WRV1 305 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Ajap1A2ALI5 412 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Tgfbr3lD3YZZ2 297 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Gpr31F8VQN3 319 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Gm21767J3QPV5 180 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Vmn2r66K7N6R9 851 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Kcns1O35173 497 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 B3galt1O54904 326 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Ppt1O88531 306 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Amy1P00687 511 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Cox5bP19536 128 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Htr2aP35363 471 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Tamm41Q3TUH1 337 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Elavl2Q60899 360 aaKnown RBP9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Cdk3Q80YP0 303 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Nhlrc2Q8BZW8 725 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Fam221aQ8C790 301 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Slc25a1Q8JZU2 311 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Fn3krpQ8K274 309 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Asb13Q8VBX0 278 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Duoxa1Q8VE49 341 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr378Q8VGT2 314 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Nt5dc2Q91X76 390 aaKnown RBP9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Dnajb11Q99KV1 358 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Snu13Q9D0T1 128 aaKnown RBP9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 9230112D13RikQ9D260 137 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Trp53tg5Q9D976 238 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Phospho2Q9D9M5 241 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Cldn12Q9ET43 244 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Dkkl1Q9QZL9 230 aa9.42□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Prr22F6TNE3 422 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Stk35Q80ZW0 539 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Zbtb42Q811H0 420 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Slc16a12Q8BGC3 486 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr796Q8VGJ1 310 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Vmn1r85Q8VIB8 308 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Slc39a8Q91W10 462 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Ddah2Q99LD8 285 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Rps21Q9CQR2 83 aaKnown RBP9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Slc52a3Q9D6X5 460 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Dmac2Q9D7K5 258 aaKnown RBP9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 MioxQ9QXN5 285 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 NcdnQ9Z0E0 729 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 CN725425A0A087WRU1 652 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 TrdcA0A0G2JEU3 153 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Gm45716A0A1B0GRQ0 93 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Dpy19l1A6X919 746 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 RradO88667 308 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 CtslP06797 334 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Il2rgP34902 369 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Cuzd1P70412 606 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 CtrcQ3SYP2 268 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 1700012B07RikQ3V0S8 276 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 SrmsQ62270 496 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Upk3bQ80YF6 275 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Gpr137bQ8BNQ3 385 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Smco3Q8BQM7 225 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Dctn4Q8CBY8 467 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Trpm6Q8CIR4 2028 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Il17rcQ8K4C2 698 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr307Q8VFN8 313 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Acot12Q9DBK0 556 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Gm5475D3YV11 175 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Adap1E9PY16 374 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Ighg2cF6TQW2 404 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr895L7N210 316 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Wnt9bO35468 359 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 P01864 335 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 SrcP05480 541 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Clk1P22518 483 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Kcng3P59053 433 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Kdm4dQ3U2K5 510 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 FuzQ3UYI6 415 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Fkbp10Q61576 581 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Sema4cQ64151 834 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Marveld1Q7TQJ1 173 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Rtp2Q80ZI2 223 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 ShfQ8CG80 238 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Lin28aQ8K3Y3 209 aaKnown RBP9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Calhm5Q8R100 309 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Vmn1r17Q8R2D8 303 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Olfr633Q8VF02 312 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 Tmem205Q91XE8 189 aa9.41□□□□□ -0.9
Ccdc40-201ENSMUST00000035935 PccbQ99MN9 541 aa9.41□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 26.9 ms