RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Btbd35f21A0A140T8Q5 498 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Olfr685A0A1L1SVG7 331 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Rhox7bA6PW38 321 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 BC048679D3YXE9 172 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Rhox2hK7N6P1 191 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Gjb3P28231 270 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Olfr1167Q7TR26 316 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Ifna13Q80SU4 189 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 LipkQ8BM14 398 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Fbxw17Q8CFE8 466 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Olfr1170Q8VFG1 316 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Elovl7Q9D2Y9 281 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Slc22a5Q9Z0E8 557 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Itgb8Q0VBD0 767 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 PianpQ6P1B3 278 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Gm5771Q792Y9 245 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Lypd4Q8BVP6 246 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Rfc3Q8R323 356 aaKnown RBP12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Mid1ip1Q9CQ20 182 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Ube2j1Q9JJZ4 318 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 IL36RNQ9QYY1 156 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Cldn6Q9Z262 219 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 DdostO54734 441 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 CdaP56389 146 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Gm5460Q3UQ97 254 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Tssk5Q8C1R0 372 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Olfr1226Q8VGM5 310 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Zcchc14Q8VIG0 956 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Gm5475D3YV11 175 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 E9Q0B3 247 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Rab22aP35285 194 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Dlx2P40764 332 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Mrps6P58064 125 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Dynlrb1P62627 96 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Fam221aQ8C790 301 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Mboat2Q8R3I2 519 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Hsd17b13Q8VCR2 304 aa12.92□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Ubr2Q6WKZ8 1755 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Ints1Q6P4S8 2195 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Olfr1293-psA0A1L1SVB5 326 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Esp6A8R0U0 136 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Cnih4Q9CX13 139 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Adrb1P34971 466 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Olfr598Q7TRR2 319 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Yif1aQ91XB7 293 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Zfp383A0A087WRR7 490 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Zfp40B1B1D3 796 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Gm3486L7N2D0 199 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Psmb1O09061 240 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Btg1P62325 171 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Ube2iP63280 158 aaKnown RBP12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Six1Q62231 284 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Naa50Q6PGB6 169 aaKnown RBP12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 2610318N02RikQ80VT5 305 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Vmn1r18Q8R2C8 299 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Rasal1Q9Z268 799 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 RgrQ9Z2B3 291 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Olfr316A0A0N4SVP2 306 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Vmn1r5B2RQT2 315 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Rpl3lE9PWZ3 407 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Gm20671F6TVX7 576 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 CtsaP16675 474 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 VipP32648 170 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Rbp4Q00724 201 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Mbd3l2Q3UXB0 228 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Olfr558Q8VGZ7 317 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Abca15E9PWH4 1668 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Trav6-7-dv9A0A075B639 125 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Gm14412A2ARR7 526 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Dock8Q8C147 2100 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 NaaaQ9D7V9 362 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Dnajc4Q9D844 244 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Gm35060A0A140LIV7 231 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Gm14403A2BFU4 402 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Scgb1b29D2XZ31 93 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Scgb1b20E9PWZ2 93 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 BC049352E9Q2Z6 85 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Pex11gQ6P6M5 241 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Cfap161Q6P8Y0 303 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Olfr1321Q7TQW4 319 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 C5ar2Q8BW93 344 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Olfr1384Q8VFA8 318 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Olfr346Q8VGJ7 309 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Shmt2Q9CZN7 504 aaKnown RBP12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 PipoxQ9D826 390 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Nkx2-4Q9EQM3 354 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Gnpnat1Q9JK38 184 aa12.91□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Ms4a7E9Q9V5 267 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Gm21812J3QN84 227 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Hoxc5P32043 222 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 EbpP70245 230 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 E2f1Q61501 430 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Tacstd2Q8BGV3 317 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Slc36a4Q8CH36 500 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Olfr1347Q8VF33 319 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Raf1Q99N57 648 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Vmn1r180B9EK86 305 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Zfp820E9Q5G8 549 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Hsd3b2P26149 373 aa12.9□□□□□ -0.34
Col5a1-201ENSMUST00000028280 Htr1bP28334 386 aa12.9□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 40.2 ms