RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 APOFQ13790 326 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 SMN1Q16637 294 aaKnown RBP8.6□□□□□ -1.03
PHGDH-222ENST00000641587 ELFN2Q5R3F8 820 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 LCN1P1Q5VSP4 162 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 MEDAGQ5VYS4 303 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 DNM1P34Q6PK57 102 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 ABHD12BQ7Z5M8 362 aaPredicted RBP8.6□□□□□ -1.03
PHGDH-222ENST00000641587 MDP1Q86V88 176 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 NPEPL1Q8NDH3 523 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 PROKR2Q8NFJ6 384 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 BBS1Q8NFJ9 593 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 BPIFB6Q8NFQ5 453 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 OR4F15Q8NGB8 312 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 OR6K6Q8NGW6 343 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 OR6X1Q8NH79 312 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 CLDND2Q8NHS1 167 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 APH1BQ8WW43 257 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 NEU4Q8WWR8 484 aaPredicted RBP8.6□□□□□ -1.03
PHGDH-222ENST00000641587 HDAC2Q92769 488 aaKnown RBP8.6□□□□□ -1.03
PHGDH-222ENST00000641587 RFKQ969G6 155 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 SLC25A44Q96H78 314 aaPredicted RBP8.6□□□□□ -1.03
PHGDH-222ENST00000641587 ZNF582Q96NG8 517 aaPredicted RBP8.6□□□□□ -1.03
PHGDH-222ENST00000641587 OR2M2Q96R28 347 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 HCAR1Q9BXC0 346 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 SYT4Q9H2B2 425 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 SRA1Q9HD15 236 aaKnown RBP8.6□□□□□ -1.03
PHGDH-222ENST00000641587 B3GAT2Q9NPZ5 323 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 HIF1ANQ9NWT6 349 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 RCE1Q9Y256 329 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 PCDHGB5Q9Y5G0 923 aa8.6□□□□□ -1.03
PHGDH-222ENST00000641587 SLC22A23A1A5C7 686 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 OR6C68A6NDL8 312 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 SLC1A7O00341 560 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 PRODHO43272 600 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 XPNPEP2O43895 674 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 SLC16A7O60669 478 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 WBP4O75554 376 aaKnown RBP8.59□□□□□ -1.03
PHGDH-222ENST00000641587 HLA-DQA2P01906 255 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 HPXP02790 462 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 ERCC1P07992 297 aaPredicted RBP8.59□□□□□ -1.03
PHGDH-222ENST00000641587 CLUP10909 449 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 SPI1P17947 270 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 GABRB1P18505 474 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 EEF1B2P24534 225 aaKnown RBP8.59□□□□□ -1.03
PHGDH-222ENST00000641587 PYCR1P32322 319 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 ARF1P84077 181 aaKnown RBP8.59□□□□□ -1.03
PHGDH-222ENST00000641587 TEKQ02763 1124 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 FMODQ06828 376 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 DBPQ10586 325 aaPredicted RBP8.59□□□□□ -1.03
PHGDH-222ENST00000641587 OCLNQ16625 522 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 C6orf141Q5SZD1 244 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 ZNF362Q5T0B9 420 aaPredicted RBP8.59□□□□□ -1.03
PHGDH-222ENST00000641587 C1QTNF12Q5T7M4 302 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 NXNL2Q5VZ03 156 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 C1orf229Q6ZS94 237 aaPredicted RBP8.59□□□□□ -1.03
PHGDH-222ENST00000641587 GLCCI1Q86VQ1 547 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 WDFY1Q8IWB7 410 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 GPR137CQ8N3F9 429 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 C3orf56Q8N813 242 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 OR51L1Q8NGJ5 315 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 OR2T4Q8NH00 348 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 FBLIM1Q8WUP2 373 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 NSMAFQ92636 917 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 TMEM186Q96B77 213 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 MS4A3Q96HJ5 214 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 TSSK2Q96PF2 358 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 RBP7Q96R05 134 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 ALG12Q9BV10 488 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 MRPL37Q9BZE1 423 aaKnown RBP8.59□□□□□ -1.03
PHGDH-222ENST00000641587 NOX3Q9HBY0 568 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 AMBNQ9NP70 447 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 SCN3BQ9NY72 215 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 VSX1Q9NZR4 365 aaPredicted RBP8.59□□□□□ -1.03
PHGDH-222ENST00000641587 BLOC1S6Q9UL45 172 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 MYRFQ9Y2G1 1151 aa8.59□□□□□ -1.03
PHGDH-222ENST00000641587 A0A1W2PPL8 197 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 B4DSR2 109 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 AHCYL1O43865 530 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 TNFAIP8O95379 198 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 AVPP01185 164 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 MSMBP08118 114 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 RPSAP08865 295 aaKnown RBP8.58□□□□□ -1.04
PHGDH-222ENST00000641587 PGA4P0DJD7 388 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 PGA3P0DJD8 388 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 CBR1P16152 277 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 COL8A2P25067 703 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 CRABP1P29762 137 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 ATP6V1E1P36543 226 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 ALDH3B1P43353 468 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 COMPP49747 757 aaPredicted RBP8.58□□□□□ -1.04
PHGDH-222ENST00000641587 SLC25A1P53007 311 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 EFNB1P98172 346 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 ZNF91Q05481 1191 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 C3orf36Q3SXR2 165 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 RBM48Q5RL73 367 aaKnown RBP8.58□□□□□ -1.04
PHGDH-222ENST00000641587 PHYHD1Q5SRE7 291 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 SLC25A30Q5SVS4 291 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 AADACL4Q5VUY2 407 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 UGT2A3Q6UWM9 527 aa8.58□□□□□ -1.04
PHGDH-222ENST00000641587 NHLRC1Q6VVB1 395 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms