RNA–Protein interactions for RNA: ENST00000639257.1

SPIN3-220, Transcript of spindlin family member 3, humanhuman

TSL 3

Gene SPIN3, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-220ENST00000639257 NKPD1Q17RQ9 610 aa15.24■□□□□ 0.03
SPIN3-220ENST00000639257 TMEM249Q2WGJ8 235 aa15.24■□□□□ 0.03
SPIN3-220ENST00000639257 SPATA46Q5T0L3 261 aa15.24■□□□□ 0.03
SPIN3-220ENST00000639257 C1orf146Q5VVC0 180 aa15.24■□□□□ 0.03
SPIN3-220ENST00000639257 ACSM5Q6NUN0 579 aa15.24■□□□□ 0.03
SPIN3-220ENST00000639257 SLC27A4Q6P1M0 643 aa15.24■□□□□ 0.03
SPIN3-220ENST00000639257 PARP8Q8N3A8 854 aa15.24■□□□□ 0.03
SPIN3-220ENST00000639257 IQCF1Q8N6M8 205 aa15.24■□□□□ 0.03
SPIN3-220ENST00000639257 ZNF540Q8NDQ6 660 aa15.24■□□□□ 0.03
SPIN3-220ENST00000639257 OR9Q1Q8NGQ5 310 aa15.24■□□□□ 0.03
SPIN3-220ENST00000639257 POM121Q96HA1 1249 aa15.24■□□□□ 0.03
SPIN3-220ENST00000639257 COG8Q96MW5 612 aa15.24■□□□□ 0.03
SPIN3-220ENST00000639257 BPESC1Q9GZL8 116 aa15.24■□□□□ 0.03
SPIN3-220ENST00000639257 POFUT1Q9H488 388 aa15.24■□□□□ 0.03
SPIN3-220ENST00000639257 MARCH7Q9H992 704 aa15.24■□□□□ 0.03
SPIN3-220ENST00000639257 SLC25A19Q9HC21 320 aa15.24■□□□□ 0.03
SPIN3-220ENST00000639257 DDX28Q9NUL7 540 aaKnown RBP15.24■□□□□ 0.03
SPIN3-220ENST00000639257 POLR1DQ9Y2S0 133 aa15.24■□□□□ 0.03
SPIN3-220ENST00000639257 SONP18583 2426 aaKnown RBP15.24■□□□□ 0.03
SPIN3-220ENST00000639257 RIIAD1A6NNX1 92 aa15.23■□□□□ 0.03
SPIN3-220ENST00000639257 ZNF3P17036 446 aa15.23■□□□□ 0.03
SPIN3-220ENST00000639257 GCH1P30793 250 aa15.23■□□□□ 0.03
SPIN3-220ENST00000639257 LIPAP38571 399 aa15.23■□□□□ 0.03
SPIN3-220ENST00000639257 MAGEB1P43366 347 aa15.23■□□□□ 0.03
SPIN3-220ENST00000639257 CENPAP49450 140 aa15.23■□□□□ 0.03
SPIN3-220ENST00000639257 ECH1Q13011 328 aa15.23■□□□□ 0.03
SPIN3-220ENST00000639257 PSG7Q13046 419 aa15.23■□□□□ 0.03
SPIN3-220ENST00000639257 FAM209AQ5JX71 171 aa15.23■□□□□ 0.03
SPIN3-220ENST00000639257 LYPD4Q6UWN0 246 aa15.23■□□□□ 0.03
SPIN3-220ENST00000639257 Q71RC1 249 aaPredicted RBP15.23■□□□□ 0.03
SPIN3-220ENST00000639257 LINC00346Q8IVM7 164 aa15.23■□□□□ 0.03
SPIN3-220ENST00000639257 ICA1LQ8NDH6 482 aa15.23■□□□□ 0.03
SPIN3-220ENST00000639257 PROKR2Q8NFJ6 384 aa15.23■□□□□ 0.03
SPIN3-220ENST00000639257 OR5K1Q8NHB7 308 aa15.23■□□□□ 0.03
SPIN3-220ENST00000639257 GTF3AQ92664 365 aaKnown RBP15.23■□□□□ 0.03
SPIN3-220ENST00000639257 PTP4A1Q93096 173 aa15.23■□□□□ 0.03
SPIN3-220ENST00000639257 HCAR1Q9BXC0 346 aa15.23■□□□□ 0.03
SPIN3-220ENST00000639257 STARD10Q9Y365 291 aa15.23■□□□□ 0.03
SPIN3-220ENST00000639257 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.22■□□□□ 0.03
SPIN3-220ENST00000639257 ABCA2Q9BZC7 2435 aa15.22■□□□□ 0.03
SPIN3-220ENST00000639257 IGHV4-61A0A0C4DH41 118 aa15.22■□□□□ 0.03
SPIN3-220ENST00000639257 ZSCAN5BA6NJL1 495 aa15.22■□□□□ 0.03
SPIN3-220ENST00000639257 H3BN98 237 aa15.22■□□□□ 0.03
SPIN3-220ENST00000639257 SURF4O15260 269 aa15.22■□□□□ 0.03
SPIN3-220ENST00000639257 TLX2O43763 284 aaPredicted RBP15.22■□□□□ 0.03
SPIN3-220ENST00000639257 LILRA1O75019 489 aa15.22■□□□□ 0.03
SPIN3-220ENST00000639257 CLUP10909 449 aa15.22■□□□□ 0.03
SPIN3-220ENST00000639257 ACHEP22303 614 aa15.22■□□□□ 0.03
SPIN3-220ENST00000639257 DAPP51397 102 aa15.22■□□□□ 0.03
SPIN3-220ENST00000639257 BLVRAP53004 296 aa15.22■□□□□ 0.03
SPIN3-220ENST00000639257 GINS1Q14691 196 aa15.22■□□□□ 0.03
SPIN3-220ENST00000639257 ALKBH6Q3KRA9 238 aa15.22■□□□□ 0.03
SPIN3-220ENST00000639257 FBXW12Q6X9E4 464 aa15.22■□□□□ 0.03
SPIN3-220ENST00000639257 OR51L1Q8NGJ5 315 aa15.22■□□□□ 0.03
SPIN3-220ENST00000639257 SNX33Q8WV41 574 aa15.22■□□□□ 0.03
SPIN3-220ENST00000639257 RDH5Q92781 318 aa15.22■□□□□ 0.03
SPIN3-220ENST00000639257 YIPF5Q969M3 257 aa15.22■□□□□ 0.03
SPIN3-220ENST00000639257 HAVCR1Q96D42 359 aa15.22■□□□□ 0.03
SPIN3-220ENST00000639257 ATF6BQ99941 703 aa15.22■□□□□ 0.03
SPIN3-220ENST00000639257 C1QTNF5Q9BXJ0 243 aa15.22■□□□□ 0.03
SPIN3-220ENST00000639257 GABARAPL1Q9H0R8 117 aa15.22■□□□□ 0.03
SPIN3-220ENST00000639257 WDR76Q9H967 626 aa15.22■□□□□ 0.03
SPIN3-220ENST00000639257 CHODLQ9H9P2 273 aa15.22■□□□□ 0.03
SPIN3-220ENST00000639257 ZNF556Q9HAH1 456 aa15.22■□□□□ 0.03
SPIN3-220ENST00000639257 CYSLTR2Q9NS75 346 aa15.22■□□□□ 0.03
SPIN3-220ENST00000639257 GRIP1Q9Y3R0 1128 aa15.22■□□□□ 0.03
SPIN3-220ENST00000639257 AP4S1Q9Y587 144 aa15.22■□□□□ 0.03
SPIN3-220ENST00000639257 TVP23AA6NH52 213 aa15.21■□□□□ 0.03
SPIN3-220ENST00000639257 LYNX1G3V0Z9 82 aa15.21■□□□□ 0.03
SPIN3-220ENST00000639257 IGHV1-46P01743 117 aa15.21■□□□□ 0.03
SPIN3-220ENST00000639257 GYPBP06028 91 aa15.21■□□□□ 0.03
SPIN3-220ENST00000639257 CD55P08174 381 aa15.21■□□□□ 0.03
SPIN3-220ENST00000639257 ACSM4P0C7M7 580 aa15.21■□□□□ 0.03
SPIN3-220ENST00000639257 LYNX1P0DP58 116 aa15.21■□□□□ 0.03
SPIN3-220ENST00000639257 RAC2P15153 192 aa15.21■□□□□ 0.03
SPIN3-220ENST00000639257 ZNF23P17027 643 aa15.21■□□□□ 0.03
SPIN3-220ENST00000639257 COL8A2P25067 703 aa15.21■□□□□ 0.03
SPIN3-220ENST00000639257 FMO3P31513 532 aa15.21■□□□□ 0.03
SPIN3-220ENST00000639257 KRTAP21-3Q3LHN1 58 aa15.21■□□□□ 0.03
SPIN3-220ENST00000639257 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.21■□□□□ 0.03
SPIN3-220ENST00000639257 ATG16L2Q8NAA4 619 aa15.21■□□□□ 0.03
SPIN3-220ENST00000639257 ST7LQ8TDW4 575 aa15.21■□□□□ 0.03
SPIN3-220ENST00000639257 APOBEC3DQ96AK3 386 aaPredicted RBP15.21■□□□□ 0.03
SPIN3-220ENST00000639257 C1orf159Q96HA4 380 aa15.21■□□□□ 0.03
SPIN3-220ENST00000639257 PURGQ9UJV8 347 aaKnown RBP15.21■□□□□ 0.03
SPIN3-220ENST00000639257 A0A1B0GWJ7 208 aa15.2■□□□□ 0.02
SPIN3-220ENST00000639257 FAM183AA6NL82 134 aa15.2■□□□□ 0.02
SPIN3-220ENST00000639257 HLA-DQA2P01906 255 aa15.2■□□□□ 0.02
SPIN3-220ENST00000639257 MT-ND5P03915 603 aa15.2■□□□□ 0.02
SPIN3-220ENST00000639257 HMGN1P05114 100 aa15.2■□□□□ 0.02
SPIN3-220ENST00000639257 IGHV4-31P0DP07 118 aa15.2■□□□□ 0.02
SPIN3-220ENST00000639257 FCGR1AP12314 374 aa15.2■□□□□ 0.02
SPIN3-220ENST00000639257 ZNF823P16415 610 aa15.2■□□□□ 0.02
SPIN3-220ENST00000639257 FASP25445 335 aa15.2■□□□□ 0.02
SPIN3-220ENST00000639257 RPS27P42677 84 aaKnown RBP15.2■□□□□ 0.02
SPIN3-220ENST00000639257 CRYBB2P43320 205 aa15.2■□□□□ 0.02
SPIN3-220ENST00000639257 ENTPD1P49961 510 aa15.2■□□□□ 0.02
SPIN3-220ENST00000639257 ZNF81P51508 661 aa15.2■□□□□ 0.02
SPIN3-220ENST00000639257 TMEM33P57088 247 aa15.2■□□□□ 0.02
SPIN3-220ENST00000639257 ACTR3P61158 418 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms