RNA–Protein interactions for RNA: ENST00000630482.2

SOX2-OT-256, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 1,012 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-256	ENST00000630482	PPP1R3C	Q9UQK1	317 aa		10.16	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	COA3	Q9Y2R0	106 aa	Predicted RBP	10.16	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	AP3M1	Q9Y2T2	418 aa		10.16	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	AUP1	Q9Y679	476 aa		10.16	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	MGAM2	Q2M2H8	2515 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	MDFIC2	A0A1B0GVS7	189 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	OR6C6	A6NF89	314 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	TMEM178B	H3BS89	294 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	SOCS2	O14508	198 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	XKRY	O14609	159 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	RER1	O15258	196 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	MLNR	O43193	412 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	SLC16A7	O60669	478 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	SERPINA1	P01009	418 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	TNFRSF1A	P19438	455 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	TNFSF4	P23510	183 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	IFNA8	P32881	189 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	SLC7A2	P52569	658 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	FXYD6P3	P58550	94 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	HOXA4	Q00056	320 aa	Predicted RBP	10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	FAM201A	Q5SY85	155 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	OR2T2	Q6IF00	324 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	ARL9	Q6T311	187 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	TMPRSS11F	Q6ZWK6	438 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	CBLL1	Q75N03	491 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	ZER1	Q7Z7L7	766 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	TREML1	Q86YW5	311 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	BHLHE23	Q8NDY6	225 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	SLC7A13	Q8TCU3	470 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	HAVCR1	Q96D42	359 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	TSSK2	Q96PF2	358 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	HOPX	Q9BPY8	73 aa	Predicted RBP	10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	WDR76	Q9H967	626 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	NTN4	Q9HB63	628 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	GCM1	Q9NP62	436 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	NDE1	Q9NXR1	346 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	IL19	Q9UHD0	177 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	SIGLEC7	Q9Y286	467 aa		10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	10.15	□□□□□ -0.78
SOX2-OT-256	ENST00000630482	TRAV40	A0A0B4J280	105 aa		10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	HTR3E	A5X5Y0	456 aa		10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	DCTN6	O00399	190 aa		10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	PRTN3	P24158	256 aa		10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	SDHA	P31040	664 aa		10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	CD80	P33681	288 aa		10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	MDH2	P40926	338 aa	Known RBP	10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	GSK3B	P49841	420 aa		10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	BAMBI	Q13145	260 aa		10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	KRT72	Q14CN4	511 aa		10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	ANKDD1A	Q495B1	522 aa		10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	ESCO2	Q56NI9	601 aa		10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	CORO6	Q6QEF8	472 aa		10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	RBMS3	Q6XE24	437 aa	Known RBP	10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	FKBP9P1	Q75LS8	142 aa		10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	TRPM8	Q7Z2W7	1104 aa		10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	RNF113B	Q8IZP6	322 aa	Known RBP	10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	PARP8	Q8N3A8	854 aa		10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	ATG16L2	Q8NAA4	619 aa		10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	FAM156A	Q8NDB6	213 aa		10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	OR1F12	Q8NHA8	337 aa		10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	RSRC1	Q96IZ7	334 aa	Known RBP	10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	MEGF10	Q96KG7	1140 aa		10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	MRI1	Q9BV20	369 aa		10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	ZNF747	Q9BV97	191 aa		10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	NUAK2	Q9H093	628 aa		10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	NMNAT1	Q9HAN9	279 aa	Predicted RBP	10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	OR5V1	Q9UGF6	321 aa		10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	LHFPL6	Q9Y693	200 aa		10.14	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	TRBV4-1	A0A0J9YWV2	114 aa		10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482		F5H5P2	479 aa		10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	GSTA4	O15217	222 aa		10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	GMNN	O75496	209 aa		10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	KHDRBS3	O75525	346 aa	Known RBP	10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	DIRAS1	O95057	198 aa		10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	NDUFB2	O95178	105 aa		10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	RPS2	P15880	293 aa	Known RBP	10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	CALB2	P22676	271 aa		10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	CDKN2A	P42771	156 aa	Known RBP	10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	NUDT2	P50583	147 aa		10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	PAX2	Q02962	417 aa		10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	FOXL1	Q12952	345 aa		10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	SEC23B	Q15437	767 aa		10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	FGD3	Q5JSP0	725 aa		10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	C8orf82	Q6P1X6	216 aa	Predicted RBP	10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	C16orf89	Q6UX73	402 aa		10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	ARPIN	Q7Z6K5	226 aa		10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	MOGAT3	Q86VF5	341 aa		10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	FITM2	Q8N6M3	262 aa		10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	FAM86B1	Q8N7N1	296 aa		10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	C19orf18	Q8NEA5	215 aa		10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	PTP4A1	Q93096	173 aa		10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	FAM162A	Q96A26	154 aa		10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	GPA33	Q99795	319 aa		10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	WAC	Q9BTA9	647 aa		10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	SSBP3	Q9BWW4	388 aa	Predicted RBP	10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	UNKL	Q9H9P5	680 aa	Known RBP	10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	NRIP3	Q9NQ35	241 aa		10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	VSX1	Q9NZR4	365 aa	Predicted RBP	10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	POLR1D	Q9Y2S0	133 aa		10.13	□□□□□ -0.79
SOX2-OT-256	ENST00000630482	IER3IP1	Q9Y5U9	82 aa		10.13	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms