RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 DOCK7Q96N67 2140 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 OTOGQ6ZRI0 2925 aa8.36□□□□□ -1.07
PDLIM5-223ENST00000627587 MRPL33O75394 65 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-223ENST00000627587 ZNF254O75437 659 aa8.35□□□□□ -1.07
PDLIM5-223ENST00000627587 MSR1P21757 451 aa8.35□□□□□ -1.07
PDLIM5-223ENST00000627587 KIR3DL2P43630 455 aa8.35□□□□□ -1.07
PDLIM5-223ENST00000627587 MXD1Q05195 221 aa8.35□□□□□ -1.07
PDLIM5-223ENST00000627587 RNPS1Q15287 305 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-223ENST00000627587 OR7E24Q6IFN5 339 aa8.35□□□□□ -1.07
PDLIM5-223ENST00000627587 ZNF544Q6NX49 715 aa8.35□□□□□ -1.07
PDLIM5-223ENST00000627587 DEGS2Q6QHC5 323 aa8.35□□□□□ -1.07
PDLIM5-223ENST00000627587 PAMR1Q6UXH9 720 aa8.35□□□□□ -1.07
PDLIM5-223ENST00000627587 CFAP77Q6ZQR2 320 aa8.35□□□□□ -1.07
PDLIM5-223ENST00000627587 LINC00299Q6ZSB3 139 aa8.35□□□□□ -1.07
PDLIM5-223ENST00000627587 SPATC1Q76KD6 591 aa8.35□□□□□ -1.07
PDLIM5-223ENST00000627587 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-223ENST00000627587 OR2G2Q8NGZ5 317 aa8.35□□□□□ -1.07
PDLIM5-223ENST00000627587 MCFD2Q8NI22 146 aa8.35□□□□□ -1.07
PDLIM5-223ENST00000627587 ABHD4Q8TB40 342 aa8.35□□□□□ -1.07
PDLIM5-223ENST00000627587 MED18Q9BUE0 208 aa8.35□□□□□ -1.07
PDLIM5-223ENST00000627587 RBM24Q9BX46 236 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-223ENST00000627587 MMP27Q9H306 513 aa8.35□□□□□ -1.07
PDLIM5-223ENST00000627587 NELFAQ9H3P2 528 aa8.35□□□□□ -1.07
PDLIM5-223ENST00000627587 RNF122Q9H9V4 155 aa8.35□□□□□ -1.07
PDLIM5-223ENST00000627587 PNRC2Q9NPJ4 139 aaKnown RBP8.35□□□□□ -1.07
PDLIM5-223ENST00000627587 SNTG1Q9NSN8 517 aa8.35□□□□□ -1.07
PDLIM5-223ENST00000627587 PARPBPQ9NWS1 579 aa8.35□□□□□ -1.07
PDLIM5-223ENST00000627587 FBXL3Q9UKT7 428 aa8.35□□□□□ -1.07
PDLIM5-223ENST00000627587 LRP12Q9Y561 859 aa8.35□□□□□ -1.07
PDLIM5-223ENST00000627587 A0A1B0GVC2 190 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 SMIM30A4D0T7 59 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 OR4C45A6NMZ5 311 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 ZNF724A8MTY0 619 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 CASKO14936 926 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 ANOS1P23352 680 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 OPRL1P41146 370 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 MAGEB1P43366 347 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 RORCP51449 518 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 LSM6P62312 80 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 ADORA2A-AS1P86434 159 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 MFGE8Q08431 387 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 ENDOGQ14249 297 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 SGCAQ16586 387 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 ACSM3Q53FZ2 586 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 YIF1BQ5BJH7 314 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 RIPPLY2Q5TAB7 128 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 FDX2Q6P4F2 183 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 SPNS3Q6ZMD2 512 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 ADGRE4PQ86SQ3 457 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 ZNF295-AS1Q8N0V1 137 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 IL17RDQ8NFM7 739 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 OR5AK2Q8NH90 309 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 ZFAND2BQ8WV99 257 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 RNF133Q8WVZ7 376 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 PPP1R14AQ96A00 147 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 SLC25A46Q96AG3 418 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 ALKBH3Q96Q83 286 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 PRDM14Q9GZV8 571 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 COMMD4Q9H0A8 199 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 TPK1Q9H3S4 243 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 BCO1Q9HAY6 547 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 CENPMQ9NSP4 180 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 GDF2Q9UK05 429 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 ITGB1BP2Q9UKP3 347 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 ZNF281Q9Y2X9 895 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 MEMO1Q9Y316 297 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 A3GALT2U3KPV4 340 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 TMEM212A6NML5 194 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 AQP7O14520 342 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 PIN1P1O15428 100 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 GATBO75879 557 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 KRT33AO76009 404 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 TGM6O95932 706 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 H2BFMP0C1H6 154 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 FCGR2AP12318 317 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 MYL9P24844 172 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 CALRP27797 417 aaKnown RBP8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 BMXP51813 675 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 CAV3P56539 151 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 MOGQ16653 247 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 KRTAP21-3Q3LHN1 58 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 ZMAT1Q5H9K5 638 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 WDR38Q5JTN6 314 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 UNQ9370/PRO34162Q6UXP9 181 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 RHOUQ7L0Q8 258 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 CEACAM19Q7Z692 300 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 TUSC5Q8IXB3 177 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 OR6Q1Q8NGQ2 317 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 OR10AC1Q8NH08 325 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 SARAFQ96BY9 339 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 SLAMF6Q96DU3 332 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 C4orf45Q96LM5 186 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 C6orf62Q9GZU0 229 aaPredicted RBP8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 SLCO5A1Q9H2Y9 848 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 CRLF2Q9HC73 371 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 AKIP1Q9NQ31 210 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 ASH2LQ9UBL3 628 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 SH3BGRL2Q9UJC5 107 aa8.34□□□□□ -1.07
PDLIM5-223ENST00000627587 ZNF175Q9Y473 711 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms