RNA–Protein interactions for RNA: ENST00000621562.1

U1.39-201, humanhuman

BASIC

Gene U1, Length 146 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.39-201ENST00000621562 CHIAQ9BZP6 476 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 FOXQ1Q9C009 403 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 POFUT1Q9H488 388 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 ZNF768Q9H5H4 540 aaKnown RBP2.88□□□□□ -1.95
U1.39-201ENST00000621562 BARX1Q9HBU1 254 aaPredicted RBP2.88□□□□□ -1.95
U1.39-201ENST00000621562 GPN1Q9HCN4 374 aaPredicted RBP2.88□□□□□ -1.95
U1.39-201ENST00000621562 CHST11Q9NPF2 352 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 PNRC2Q9NPJ4 139 aaKnown RBP2.88□□□□□ -1.95
U1.39-201ENST00000621562 SDHAF2Q9NX18 166 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 FAM206AQ9NX38 181 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 TAS2R8Q9NYW2 309 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 PISDQ9UG56 409 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 ZNF230Q9UIE0 474 aaPredicted RBP2.88□□□□□ -1.95
U1.39-201ENST00000621562 GDF2Q9UK05 429 aaPredicted RBP2.88□□□□□ -1.95
U1.39-201ENST00000621562 FBXO4Q9UKT5 387 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 HHLA2Q9UM44 414 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 DHDHQ9UQ10 334 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 SLC5A6Q9Y289 635 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 PLEKHA6Q9Y2H5 1048 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 COA3Q9Y2R0 106 aaPredicted RBP2.88□□□□□ -1.95
U1.39-201ENST00000621562 TMA7Q9Y2S6 64 aaKnown RBP2.88□□□□□ -1.95
U1.39-201ENST00000621562 MAB21L2Q9Y586 359 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 LHFPL6Q9Y693 200 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 TTC28Q96AY4 2481 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 CADP27708 2225 aa2.88□□□□□ -1.95
U1.39-201ENST00000621562 COL6A3P12111 3177 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 FREM2Q5SZK8 3169 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 CEP250Q9BV73 2442 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 FRYQ5TBA9 3013 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 IGHV3-20A0A0C4DH32 117 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 UBE2QL1A1L167 161 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 C5orf63A6NC05 138 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 TMEM235A6NFC5 223 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 A6NIZ1 184 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 RFPL4AA6NLU0 287 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 VSTM2BA6NLU5 285 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 DBX1A6NMT0 343 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 OR2AT4A6NND4 320 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 ZNF814B7Z6K7 855 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 SHISA8B8ZZ34 492 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 F5H5P2 479 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 RFPL4AL1F8VTS6 287 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 P2RY10O00398 339 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 XKRYO14609 159 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 GOSR2O14653 212 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 MSTNO14793 375 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 BET1O15155 118 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 ARPC5O15511 151 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 ZNF208O43345 1280 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 MBTPS2O43462 519 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 NUDT21O43809 227 aaKnown RBP2.87□□□□□ -1.95
U1.39-201ENST00000621562 GMFGO60234 142 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 RP2O75695 350 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 RBBP9O75884 186 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 TIAF1O95411 115 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 BPNT1O95861 308 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 HPP00738 406 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 RLN2P04090 185 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 AMY2AP04746 511 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 OR4E1P0C645 316 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 UBBP0CG47 229 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 UBCP0CG48 685 aaKnown RBP2.87□□□□□ -1.95
U1.39-201ENST00000621562 PGA4P0DJD7 388 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 PGA3P0DJD8 388 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 VSIG8P0DPA2 414 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 SRFP11831 508 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 SLC25A4P12235 298 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 MYF5P13349 255 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 HPGDP15428 266 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 ZNF17P17021 662 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 ZNF28P17035 718 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 KLK2P20151 261 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 HSD11B1P28845 292 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 CRABP1P29762 137 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 FAUP35544 74 aaKnown RBP2.87□□□□□ -1.95
U1.39-201ENST00000621562 CD96P40200 585 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 CASRP41180 1078 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 MMP16P51512 607 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 ZNF133P52736 654 aaPredicted RBP2.87□□□□□ -1.95
U1.39-201ENST00000621562 CLDN6P56747 220 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 FBXW4P57775 412 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 ACTBP60709 375 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 RAP1BP61224 184 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 HNRNPKP61978 463 aaKnown RBP eCLIP2.87□□□□□ -1.95
U1.39-201ENST00000621562 RAP1AP62834 184 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 RPS27AP62979 156 aaKnown RBP2.87□□□□□ -1.95
U1.39-201ENST00000621562 UBA52P62987 128 aaKnown RBP2.87□□□□□ -1.95
U1.39-201ENST00000621562 ACTG1P63261 375 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 ADAM8P78325 824 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 HSD11B2P80365 405 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 FOXK1P85037 733 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 HSF1Q00613 529 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 SORDQ00796 357 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 SPOCK1Q08629 439 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 RIPPLY1Q0D2K3 151 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 DHRS2Q13268 280 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 SMAD4Q13485 552 aaKnown RBP2.87□□□□□ -1.95
U1.39-201ENST00000621562 SQSTM1Q13501 440 aa2.87□□□□□ -1.95
U1.39-201ENST00000621562 GK2Q14410 553 aaPredicted RBP2.87□□□□□ -1.95
U1.39-201ENST00000621562 ZNF345Q14585 488 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms