RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 METTL15A6NJ78 407 aa12.77□□□□□ -0.37
CD48-203ENST00000613788 CRYGSP22914 178 aa12.77□□□□□ -0.37
CD48-203ENST00000613788 PTAFRP25105 342 aa12.77□□□□□ -0.37
CD48-203ENST00000613788 HSD11B1P28845 292 aa12.77□□□□□ -0.37
CD48-203ENST00000613788 OPRL1P41146 370 aa12.77□□□□□ -0.37
CD48-203ENST00000613788 ETV1P50549 477 aa12.77□□□□□ -0.37
CD48-203ENST00000613788 RIDAP52758 137 aaKnown RBP12.77□□□□□ -0.37
CD48-203ENST00000613788 MVKQ03426 396 aa12.77□□□□□ -0.37
CD48-203ENST00000613788 KCTD21Q4G0X4 260 aa12.77□□□□□ -0.37
CD48-203ENST00000613788 CDONQ4KMG0 1287 aa12.77□□□□□ -0.37
CD48-203ENST00000613788 ARL9Q6T311 187 aa12.77□□□□□ -0.37
CD48-203ENST00000613788 SEZ6L2Q6UXD5 910 aa12.77□□□□□ -0.37
CD48-203ENST00000613788 TMPRSS11AQ6ZMR5 421 aa12.77□□□□□ -0.37
CD48-203ENST00000613788 MEX3BQ6ZN04 569 aaKnown RBP12.77□□□□□ -0.37
CD48-203ENST00000613788 SSX6Q7RTT6 188 aa12.77□□□□□ -0.37
CD48-203ENST00000613788 PRSS48Q7RTY5 328 aa12.77□□□□□ -0.37
CD48-203ENST00000613788 RFLNBQ8N5W9 214 aa12.77□□□□□ -0.37
CD48-203ENST00000613788 POM121L2Q96KW2 1035 aa12.77□□□□□ -0.37
CD48-203ENST00000613788 DCLRE1CQ96SD1 692 aaKnown RBP12.77□□□□□ -0.37
CD48-203ENST00000613788 SPOCK3Q9BQ16 436 aa12.77□□□□□ -0.37
CD48-203ENST00000613788 KCNS3Q9BQ31 491 aa12.77□□□□□ -0.37
CD48-203ENST00000613788 CDCA4Q9BXL8 241 aa12.77□□□□□ -0.37
CD48-203ENST00000613788 TTTY10Q9BZA0 68 aa12.77□□□□□ -0.37
CD48-203ENST00000613788 ESRP2Q9H6T0 727 aaKnown RBP12.77□□□□□ -0.37
CD48-203ENST00000613788 ELOVL3Q9HB03 270 aa12.77□□□□□ -0.37
CD48-203ENST00000613788 ERGIC3Q9Y282 383 aa12.77□□□□□ -0.37
CD48-203ENST00000613788 CAB39Q9Y376 341 aaPredicted RBP12.77□□□□□ -0.37
CD48-203ENST00000613788 HCFC1P51610 2035 aa12.77□□□□□ -0.37
CD48-203ENST00000613788 LOC100509620A0A075B734 347 aa12.76□□□□□ -0.37
CD48-203ENST00000613788 C5orf49A4QMS7 147 aa12.76□□□□□ -0.37
CD48-203ENST00000613788 F5H5K5 113 aa12.76□□□□□ -0.37
CD48-203ENST00000613788 PSMD9O00233 223 aa12.76□□□□□ -0.37
CD48-203ENST00000613788 CRYAAP02489 173 aa12.76□□□□□ -0.37
CD48-203ENST00000613788 CELA3BP08861 270 aa12.76□□□□□ -0.37
CD48-203ENST00000613788 CECR9P0C854 216 aa12.76□□□□□ -0.37
CD48-203ENST00000613788 LIMS3P0CW19 117 aa12.76□□□□□ -0.37
CD48-203ENST00000613788 LIMS4P0CW20 117 aa12.76□□□□□ -0.37
CD48-203ENST00000613788 CCNOP22674 350 aa12.76□□□□□ -0.37
CD48-203ENST00000613788 DCTDP32321 178 aa12.76□□□□□ -0.37
CD48-203ENST00000613788 TPTEP56180 551 aa12.76□□□□□ -0.37
CD48-203ENST00000613788 GALK2Q01415 458 aa12.76□□□□□ -0.37
CD48-203ENST00000613788 BEX5Q5H9J7 111 aa12.76□□□□□ -0.37
CD48-203ENST00000613788 ZNF684Q5T5D7 378 aa12.76□□□□□ -0.37
CD48-203ENST00000613788 FAM220AQ7Z4H9 259 aa12.76□□□□□ -0.37
CD48-203ENST00000613788 SYS1Q8N2H4 156 aa12.76□□□□□ -0.37
CD48-203ENST00000613788 KLHL36Q8N4N3 616 aa12.76□□□□□ -0.37
CD48-203ENST00000613788 YIPF7Q8N8F6 280 aa12.76□□□□□ -0.37
CD48-203ENST00000613788 ZNF649Q9BS31 505 aa12.76□□□□□ -0.37
CD48-203ENST00000613788 CDH20Q9HBT6 801 aa12.76□□□□□ -0.37
CD48-203ENST00000613788 CRIM1Q9NZV1 1036 aa12.76□□□□□ -0.37
CD48-203ENST00000613788 LRP12Q9Y561 859 aa12.76□□□□□ -0.37
CD48-203ENST00000613788 SNX5Q9Y5X3 404 aa12.76□□□□□ -0.37
CD48-203ENST00000613788 J3QLW9 94 aa12.75□□□□□ -0.37
CD48-203ENST00000613788 MYL12BO14950 172 aa12.75□□□□□ -0.37
CD48-203ENST00000613788 CLDN1O95832 211 aa12.75□□□□□ -0.37
CD48-203ENST00000613788 ADRA2AP08913 450 aa12.75□□□□□ -0.37
CD48-203ENST00000613788 ZNF19P17023 458 aa12.75□□□□□ -0.37
CD48-203ENST00000613788 CD40P25942 277 aa12.75□□□□□ -0.37
CD48-203ENST00000613788 OTX1P32242 354 aaPredicted RBP12.75□□□□□ -0.37
CD48-203ENST00000613788 PRKXP51817 358 aa12.75□□□□□ -0.37
CD48-203ENST00000613788 NAAAQ02083 359 aa12.75□□□□□ -0.37
CD48-203ENST00000613788 RSPO1Q2MKA7 263 aaPredicted RBP12.75□□□□□ -0.37
CD48-203ENST00000613788 KRTAP27-1Q3LI81 207 aa12.75□□□□□ -0.37
CD48-203ENST00000613788 ACBD4Q8NC06 268 aa12.75□□□□□ -0.37
CD48-203ENST00000613788 HAVCR2Q8TDQ0 301 aa12.75□□□□□ -0.37
CD48-203ENST00000613788 SLC7A6Q92536 515 aa12.75□□□□□ -0.37
CD48-203ENST00000613788 SGCDQ92629 289 aa12.75□□□□□ -0.37
CD48-203ENST00000613788 SIGLEC11Q96RL6 698 aa12.75□□□□□ -0.37
CD48-203ENST00000613788 SP140LQ9H930 580 aa12.75□□□□□ -0.37
CD48-203ENST00000613788 EIF3KQ9UBQ5 218 aaKnown RBP12.75□□□□□ -0.37
CD48-203ENST00000613788 CLEC2DQ9UHP7 191 aa12.75□□□□□ -0.37
CD48-203ENST00000613788 MRM2Q9UI43 246 aaKnown RBP12.75□□□□□ -0.37
CD48-203ENST00000613788 GNG8Q9UK08 70 aa12.75□□□□□ -0.37
CD48-203ENST00000613788 CACNA1CQ13936 2221 aa12.75□□□□□ -0.37
CD48-203ENST00000613788 FLNCQ14315 2725 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 ADGRG4Q8IZF6 3080 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 TMEM129A0AVI4 362 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 A1L4Q6 167 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 DPRXA6NFQ7 191 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 TRIM64A6NGJ6 449 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 PRR32B1ATL7 298 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 M0R135 149 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 MAGEB4O15481 346 aaPredicted RBP12.74□□□□□ -0.37
CD48-203ENST00000613788 MT-ND2P03891 347 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 MT-ND5P03915 603 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 DBHP09172 617 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 CCL2P13500 99 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 NR1H2P55055 460 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 OR12D2P58182 307 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 MRPL28Q13084 256 aaKnown RBP12.74□□□□□ -0.37
CD48-203ENST00000613788 TP53I3Q53FA7 332 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 NCMAPQ5T1S8 102 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 LIPNQ5VXI9 398 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 SP5Q6BEB4 398 aaPredicted RBP12.74□□□□□ -0.37
CD48-203ENST00000613788 DRAM2Q6UX65 266 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 UNQ6126/PRO20091Q6UXV3 157 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 MYPOPQ86VE0 399 aaPredicted RBP12.74□□□□□ -0.37
CD48-203ENST00000613788 SVOPQ8N4V2 548 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 ZNF283Q8N7M2 679 aa12.74□□□□□ -0.37
CD48-203ENST00000613788 NANOGP1Q8N7R0 232 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms