RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 PDLIM3Q53GG5 364 aaPredicted RBP12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 PAN3Q58A45 887 aaKnown RBP12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 CCDC190Q86UF4 302 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 CCDC71Q8IV32 467 aaPredicted RBP12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 LGI3Q8N145 548 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 OR51A2Q8NGJ7 313 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 GPBAR1Q8TDU6 330 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 FRZBQ92765 325 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 UPRTQ96BW1 309 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 KIRREL1Q96J84 757 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 MENTQ9BUN1 341 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 PTDSS2Q9BVG9 487 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 TAS2R5Q9NYW4 299 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 ARGFXA6NJG6 315 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 RPA2P15927 270 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 PRICKLE4Q2TBC4 344 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 PXT1Q8NFP0 134 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 MALSU1Q96EH3 234 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 MMP25Q9NPA2 562 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 CCL27Q9Y4X3 112 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 LALBAP00709 142 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 M6PRP20645 277 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 CLDN20P56880 219 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 HNF4GQ14541 408 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 UBALD2Q8IYN6 164 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 OR5AS1Q8N127 324 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 TMEM217Q8N7C4 229 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 WDSUB1Q8N9V3 476 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 C3orf49Q96BT1 292 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 DEFB127Q9H1M4 99 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 HAO2Q9NYQ3 351 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 IGHA2P01877 340 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 CD3DP04234 171 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 ABCD3P28288 659 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 MRPS34P82930 218 aaKnown RBP12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 IL10RAQ13651 578 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 OR51F2Q8NH61 342 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 SPACA9Q96E40 222 aaPredicted RBP12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 CRISPLD2Q9H0B8 497 aa12.9□□□□□ -0.34
PCDHB16-201ENST00000609684 TRIM64BA6NI03 449 aa12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 TOR1AO14656 332 aa12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 EFSO43281 561 aa12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 CLDN1O95832 211 aa12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 CELA2BP08218 269 aaPredicted RBP12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 DCTDP32321 178 aa12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 PPP1CAP62136 330 aa12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 HLA-BQ31612 363 aa12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 SDHAF2Q9NX18 166 aa12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 B3GAT1Q9P2W7 334 aa12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 GDF2Q9UK05 429 aaPredicted RBP12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 TRAV1-2A0A0B4J238 106 aa12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 GLI4P10075 376 aa12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 SUMO3P55854 103 aaPredicted RBP12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 C21orf58P58505 322 aa12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 EIF4EBP2Q13542 120 aaPredicted RBP12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 ESCO2Q56NI9 601 aa12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 DNAJB12Q9NXW2 375 aaKnown RBP12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 ANKUB1A6NFN9 424 aa12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 HYAL3O43820 417 aaPredicted RBP12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 RFC3P40938 356 aa12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 RFX2P48378 723 aa12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 NKX6-1P78426 367 aaPredicted RBP12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 DPPA2Q7Z7J5 298 aa12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 RBM38Q9H0Z9 239 aaKnown RBP12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 A0A096LPE4 126 aa12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 A0A1W2PPZ6 126 aa12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 SDCBPO00560 298 aaPredicted RBP12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 NXPH3O95157 252 aa12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 EDDM3BP56851 147 aa12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 ZNF117Q03924 483 aa12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 PLPP5Q8NEB5 264 aa12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 TCTEX1D2Q8WW35 142 aa12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 GABRG3Q99928 467 aa12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 VN1R1Q9GZP7 353 aa12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 ANKRD31Q8N7Z5 1873 aa12.89□□□□□ -0.35
PCDHB16-201ENST00000609684 HSD17B6O14756 317 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 PRSS23O95084 383 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 LIMS3P0CW19 117 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 LIMS4P0CW20 117 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 SHBQ15464 509 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 TMEM200AQ86VY9 491 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 C1QTNF6Q9BXI9 259 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 ERVMER34-1Q9H9K5 563 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 NGBQ9NPG2 151 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 HDGFL3Q9Y3E1 203 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 SHISA8B8ZZ34 492 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 TNFSF11O14788 317 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 HS3ST1O14792 307 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 DEGS1O15121 323 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 SPNP16150 400 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 GNB3P16520 340 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 TAS2R30P59541 319 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 HBG1P69891 147 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 HBG2P69892 147 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 ZIC1Q15915 447 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 OR52W1Q6IF63 320 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 PLXDC2Q6UX71 529 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 KANSL1Q7Z3B3 1105 aa12.88□□□□□ -0.35
PCDHB16-201ENST00000609684 OR10R2Q8NGX6 335 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms