RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 CD80P33681 288 aa11.23□□□□□ -0.61
POLR2J3-219ENST00000608621 KRR1Q13601 381 aaKnown RBP11.23□□□□□ -0.61
POLR2J3-219ENST00000608621 GPR139Q6DWJ6 353 aa11.23□□□□□ -0.61
POLR2J3-219ENST00000608621 SLC27A4Q6P1M0 643 aa11.23□□□□□ -0.61
POLR2J3-219ENST00000608621 SHISA2Q6UWI4 295 aa11.23□□□□□ -0.61
POLR2J3-219ENST00000608621 CYP4Z1Q86W10 505 aa11.23□□□□□ -0.61
POLR2J3-219ENST00000608621 MUC20Q8N307 709 aaPredicted RBP11.23□□□□□ -0.61
POLR2J3-219ENST00000608621 OR8G5Q8NG78 346 aa11.23□□□□□ -0.61
POLR2J3-219ENST00000608621 OR5L1Q8NGL2 311 aa11.23□□□□□ -0.61
POLR2J3-219ENST00000608621 OR13G1Q8NGZ3 307 aa11.23□□□□□ -0.61
POLR2J3-219ENST00000608621 SLC7A13Q8TCU3 470 aa11.23□□□□□ -0.61
POLR2J3-219ENST00000608621 C1orf147Q96MC9 270 aaPredicted RBP11.23□□□□□ -0.61
POLR2J3-219ENST00000608621 NDEL1Q9GZM8 345 aa11.23□□□□□ -0.61
POLR2J3-219ENST00000608621 MS4A7Q9GZW8 240 aaPredicted RBP11.23□□□□□ -0.61
POLR2J3-219ENST00000608621 NUAK2Q9H093 628 aa11.23□□□□□ -0.61
POLR2J3-219ENST00000608621 ANKRD19PQ9H560 264 aa11.23□□□□□ -0.61
POLR2J3-219ENST00000608621 TMEM165Q9HC07 324 aa11.23□□□□□ -0.61
POLR2J3-219ENST00000608621 NRIP3Q9NQ35 241 aa11.23□□□□□ -0.61
POLR2J3-219ENST00000608621 VSX1Q9NZR4 365 aaPredicted RBP11.23□□□□□ -0.61
POLR2J3-219ENST00000608621 IL20RAQ9UHF4 553 aa11.23□□□□□ -0.61
POLR2J3-219ENST00000608621 IER3IP1Q9Y5U9 82 aa11.23□□□□□ -0.61
POLR2J3-219ENST00000608621 ENPP4Q9Y6X5 453 aa11.23□□□□□ -0.61
POLR2J3-219ENST00000608621 PKD1L1Q8TDX9 2849 aa11.22□□□□□ -0.61
POLR2J3-219ENST00000608621 IGHV3-64DA0A0J9YX35 117 aa11.22□□□□□ -0.61
POLR2J3-219ENST00000608621 IFNL4K9M1U5 179 aa11.22□□□□□ -0.61
POLR2J3-219ENST00000608621 SLC22A2O15244 555 aa11.22□□□□□ -0.61
POLR2J3-219ENST00000608621 GPANK1O95872 356 aa11.22□□□□□ -0.61
POLR2J3-219ENST00000608621 CYB5R3P00387 301 aaPredicted RBP11.22□□□□□ -0.61
POLR2J3-219ENST00000608621 COX4I1P13073 169 aa11.22□□□□□ -0.61
POLR2J3-219ENST00000608621 CDKN2AP42771 156 aaKnown RBP11.22□□□□□ -0.61
POLR2J3-219ENST00000608621 CENPAP49450 140 aa11.22□□□□□ -0.61
POLR2J3-219ENST00000608621 RGS6P49758 472 aa11.22□□□□□ -0.61
POLR2J3-219ENST00000608621 GSK3BP49841 420 aa11.22□□□□□ -0.61
POLR2J3-219ENST00000608621 MMP16P51512 607 aa11.22□□□□□ -0.61
POLR2J3-219ENST00000608621 SLC7A2P52569 658 aa11.22□□□□□ -0.61
POLR2J3-219ENST00000608621 KCNMB1Q16558 191 aa11.22□□□□□ -0.61
POLR2J3-219ENST00000608621 DOCK11Q5JSL3 2073 aa11.22□□□□□ -0.61
POLR2J3-219ENST00000608621 FBXW12Q6X9E4 464 aa11.22□□□□□ -0.61
POLR2J3-219ENST00000608621 PTCHD4Q6ZW05 846 aa11.22□□□□□ -0.61
POLR2J3-219ENST00000608621 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.22□□□□□ -0.61
POLR2J3-219ENST00000608621 JAZF1Q86VZ6 243 aa11.22□□□□□ -0.61
POLR2J3-219ENST00000608621 OR10AD1Q8NGE0 317 aa11.22□□□□□ -0.61
POLR2J3-219ENST00000608621 OR52E2Q8NGJ4 325 aa11.22□□□□□ -0.61
POLR2J3-219ENST00000608621 FAM162AQ96A26 154 aa11.22□□□□□ -0.61
POLR2J3-219ENST00000608621 MEGF10Q96KG7 1140 aa11.22□□□□□ -0.61
POLR2J3-219ENST00000608621 ZNF582Q96NG8 517 aaPredicted RBP11.22□□□□□ -0.61
POLR2J3-219ENST00000608621 HOPXQ9BPY8 73 aaPredicted RBP11.22□□□□□ -0.61
POLR2J3-219ENST00000608621 OR5V1Q9UGF6 321 aa11.22□□□□□ -0.61
POLR2J3-219ENST00000608621 LRCH1Q9Y2L9 728 aa11.22□□□□□ -0.61
POLR2J3-219ENST00000608621 SOX21Q9Y651 276 aaPredicted RBP11.22□□□□□ -0.61
POLR2J3-219ENST00000608621 IGHV3OR16-10A0A075B7F0 116 aa11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 J3QW42 95 aa11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 H1F0P07305 194 aaKnown RBP11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 IGHV4-38-2P0DP08 117 aa11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 RPS2P15880 293 aaKnown RBP11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 NCK1P16333 377 aa11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 OMPP47874 163 aa11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 SRP9P49458 86 aaKnown RBP11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 FXYD6P3P58550 94 aa11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 HIST1H3AP68431 136 aa11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 PAX2Q02962 417 aa11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 MEP1BQ16820 701 aa11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 RSPO1Q2MKA7 263 aaPredicted RBP11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 FGD3Q5JSP0 725 aa11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 PRR31Q5SQ13 230 aa11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 HIST2H3PS2Q5TEC6 136 aa11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 HIST2H3AQ71DI3 136 aa11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 KLBQ86Z14 1044 aa11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 GJC3Q8NFK1 279 aa11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 RAB40AQ8WXH6 277 aa11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 APOBEC3DQ96AK3 386 aaPredicted RBP11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 RSRC1Q96IZ7 334 aaKnown RBP11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 TSSK2Q96PF2 358 aa11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 TMEM246Q9BRR3 403 aa11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 SSBP3Q9BWW4 388 aaPredicted RBP11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 ZNF696Q9H7X3 374 aa11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 ZMAT3Q9HA38 289 aaKnown RBP11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 SRA1Q9HD15 236 aaKnown RBP11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 MIOXQ9UGB7 285 aa11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 ATPIF1Q9UII2 106 aa11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 AURKCQ9UQB9 309 aa11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 POLR1DQ9Y2S0 133 aa11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 FAM32AQ9Y421 112 aaKnown RBP11.21□□□□□ -0.61
POLR2J3-219ENST00000608621 A0A1W2PRQ8 180 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 UNC119BA6NIH7 251 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 F5H5P2 479 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 DCTN6O00399 190 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 MLNRO43193 412 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 KCNAB3O43448 404 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 TXNDC12O95881 172 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 RNASE1P07998 156 aaKnown RBP11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 CPT2P23786 658 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 PMELP40967 661 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 RPS6KA3P51812 740 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 GNB2P62879 340 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 DGCR6Q14129 220 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 SLC9A3R2Q15599 337 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 FAM201AQ5SY85 155 aa11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 C8orf82Q6P1X6 216 aaPredicted RBP11.2□□□□□ -0.62
POLR2J3-219ENST00000608621 CORO6Q6QEF8 472 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms