RNA–Protein interactions for RNA: ENST00000601170.5

SMG9-211, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG9, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-211ENST00000601170 PTX4Q96A99 478 aa12.91□□□□□ -0.34
SMG9-211ENST00000601170 LINC00052Q96N35 136 aa12.91□□□□□ -0.34
SMG9-211ENST00000601170 SLC7A5P2Q9GIP4 190 aa12.91□□□□□ -0.34
SMG9-211ENST00000601170 TTYH1Q9H313 450 aaPredicted RBP12.91□□□□□ -0.34
SMG9-211ENST00000601170 CNTD2Q9H8S5 307 aa12.91□□□□□ -0.34
SMG9-211ENST00000601170 CHST11Q9NPF2 352 aa12.91□□□□□ -0.34
SMG9-211ENST00000601170 MED9Q9NWA0 146 aa12.91□□□□□ -0.34
SMG9-211ENST00000601170 GDF2Q9UK05 429 aaPredicted RBP12.91□□□□□ -0.34
SMG9-211ENST00000601170 FBXO4Q9UKT5 387 aa12.91□□□□□ -0.34
SMG9-211ENST00000601170 TRAV14DV4A0A0A6YYC5 116 aa12.9□□□□□ -0.34
SMG9-211ENST00000601170 RFPL4AA6NLU0 287 aa12.9□□□□□ -0.34
SMG9-211ENST00000601170 SHISA8B8ZZ34 492 aa12.9□□□□□ -0.34
SMG9-211ENST00000601170 RFPL4AL1F8VTS6 287 aa12.9□□□□□ -0.34
SMG9-211ENST00000601170 H3BML4 177 aa12.9□□□□□ -0.34
SMG9-211ENST00000601170 CSN2P05814 226 aa12.9□□□□□ -0.34
SMG9-211ENST00000601170 RPA2P15927 270 aa12.9□□□□□ -0.34
SMG9-211ENST00000601170 CALCRP30988 508 aa12.9□□□□□ -0.34
SMG9-211ENST00000601170 C17orf107Q6ZR85 190 aa12.9□□□□□ -0.34
SMG9-211ENST00000601170 PRSS42Q7Z5A4 293 aa12.9□□□□□ -0.34
SMG9-211ENST00000601170 ZNF584Q8IVC4 421 aa12.9□□□□□ -0.34
SMG9-211ENST00000601170 OR13C8Q8NGS7 320 aa12.9□□□□□ -0.34
SMG9-211ENST00000601170 RNF133Q8WVZ7 376 aa12.9□□□□□ -0.34
SMG9-211ENST00000601170 FGGYQ96C11 551 aa12.9□□□□□ -0.34
SMG9-211ENST00000601170 FOXRED1Q96CU9 486 aaPredicted RBP12.9□□□□□ -0.34
SMG9-211ENST00000601170 SLC6A7Q99884 636 aa12.9□□□□□ -0.34
SMG9-211ENST00000601170 NUDT22Q9BRQ3 303 aa12.9□□□□□ -0.34
SMG9-211ENST00000601170 EMC6Q9BV81 110 aa12.9□□□□□ -0.34
SMG9-211ENST00000601170 ZNF576Q9H609 170 aa12.9□□□□□ -0.34
SMG9-211ENST00000601170 ZNF230Q9UIE0 474 aaPredicted RBP12.9□□□□□ -0.34
SMG9-211ENST00000601170 WIPF3A6NGB9 483 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 SMAD9O15198 467 aaKnown RBP12.89□□□□□ -0.35
SMG9-211ENST00000601170 MMP16P51512 607 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 DHRS2Q13268 280 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 UBXN2BQ14CS0 331 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 ZNF660Q6AZW8 331 aaPredicted RBP12.89□□□□□ -0.35
SMG9-211ENST00000601170 DDIT4LQ96D03 193 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 EDEM2Q9BV94 578 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 PFDN2Q9UHV9 154 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 ZNF107Q9UII5 783 aaPredicted RBP12.89□□□□□ -0.35
SMG9-211ENST00000601170 SESN1Q9Y6P5 492 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 NPIPB13A6NJU9 1138 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 NPIPB4C9JG80 1138 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 SPDEFO95238 335 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 TTRP02766 147 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 NAGAP17050 411 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 RAB6AP20340 208 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 MPGP29372 298 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 BDKRB2P30411 391 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 GNALP38405 381 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 BIDP55957 195 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 NKPD1Q17RQ9 610 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 ZNF813Q6ZN06 617 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 CD163Q86VB7 1156 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 SLC25A45Q8N413 288 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 OR10H5Q8NGA6 315 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 OR6K3Q8NGY3 331 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 C11orf40Q8WZ69 217 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 AQP3Q92482 292 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 EDAQ92838 391 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 SLAMF6Q96DU3 332 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 PCED1AQ9H1Q7 454 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 MYOZ1Q9NP98 299 aaPredicted RBP12.89□□□□□ -0.35
SMG9-211ENST00000601170 FAM206AQ9NX38 181 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 FBXL2Q9UKC9 423 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 HRH3Q9Y5N1 445 aa12.89□□□□□ -0.35
SMG9-211ENST00000601170 PHF3Q92576 2039 aaKnown RBP12.89□□□□□ -0.35
SMG9-211ENST00000601170 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.88□□□□□ -0.35
SMG9-211ENST00000601170 METTL21EPA6NDL7 271 aa12.88□□□□□ -0.35
SMG9-211ENST00000601170 VSTM2BA6NLU5 285 aa12.88□□□□□ -0.35
SMG9-211ENST00000601170 RAB27BO00194 218 aa12.88□□□□□ -0.35
SMG9-211ENST00000601170 SUMO3P55854 103 aaPredicted RBP12.88□□□□□ -0.35
SMG9-211ENST00000601170 ZNF260Q3ZCT1 412 aa12.88□□□□□ -0.35
SMG9-211ENST00000601170 CLVS2Q5SYC1 327 aa12.88□□□□□ -0.35
SMG9-211ENST00000601170 ANKRD37Q7Z713 158 aa12.88□□□□□ -0.35
SMG9-211ENST00000601170 FJX1Q86VR8 437 aa12.88□□□□□ -0.35
SMG9-211ENST00000601170 KMT5CQ86Y97 462 aa12.88□□□□□ -0.35
SMG9-211ENST00000601170 BEST3Q8N1M1 668 aa12.88□□□□□ -0.35
SMG9-211ENST00000601170 NFAM1Q8NET5 270 aaPredicted RBP12.88□□□□□ -0.35
SMG9-211ENST00000601170 OR52N4Q8NGI2 321 aa12.88□□□□□ -0.35
SMG9-211ENST00000601170 OR5M8Q8NGP6 311 aa12.88□□□□□ -0.35
SMG9-211ENST00000601170 CMBLQ96DG6 245 aa12.88□□□□□ -0.35
SMG9-211ENST00000601170 DMRTA2Q96SC8 542 aa12.88□□□□□ -0.35
SMG9-211ENST00000601170 TGIF2Q9GZN2 237 aa12.88□□□□□ -0.35
SMG9-211ENST00000601170 ZNF768Q9H5H4 540 aaKnown RBP12.88□□□□□ -0.35
SMG9-211ENST00000601170 RAB22AQ9UL26 194 aa12.88□□□□□ -0.35
SMG9-211ENST00000601170 DISC1C4P0D8 188 aa12.88□□□□□ -0.35
SMG9-211ENST00000601170 TEX46H3BTG2 121 aa12.88□□□□□ -0.35
SMG9-211ENST00000601170 ZNF208O43345 1280 aa12.88□□□□□ -0.35
SMG9-211ENST00000601170 HLA-AP01891 365 aaKnown RBP12.88□□□□□ -0.35
SMG9-211ENST00000601170 LIPCP11150 499 aa12.88□□□□□ -0.35
SMG9-211ENST00000601170 CD34P28906 385 aa12.88□□□□□ -0.35
SMG9-211ENST00000601170 UNC119Q13432 240 aa12.88□□□□□ -0.35
SMG9-211ENST00000601170 CDNFQ49AH0 187 aa12.88□□□□□ -0.35
SMG9-211ENST00000601170 RAB12Q6IQ22 244 aa12.88□□□□□ -0.35
SMG9-211ENST00000601170 RHBDD2Q6NTF9 364 aa12.88□□□□□ -0.35
SMG9-211ENST00000601170 KLHL24Q6TFL4 600 aa12.88□□□□□ -0.35
SMG9-211ENST00000601170 TRAPPC6BQ86SZ2 158 aa12.88□□□□□ -0.35
SMG9-211ENST00000601170 SLC51BQ86UW2 128 aa12.88□□□□□ -0.35
SMG9-211ENST00000601170 PAQR4Q8N4S7 273 aaPredicted RBP12.88□□□□□ -0.35
SMG9-211ENST00000601170 FAM46BQ96A09 425 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms