RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 CNN2Q99439 309 aaKnown RBP16.67■□□□□ 0.26
UPF1-209ENST00000600310 BCL2L14Q9BZR8 327 aa16.67■□□□□ 0.26
UPF1-209ENST00000600310 ELOVL3Q9HB03 270 aa16.67■□□□□ 0.26
UPF1-209ENST00000600310 ADGRL4Q9HBW9 690 aa16.67■□□□□ 0.26
UPF1-209ENST00000600310 TBCCD1Q9NVR7 557 aa16.67■□□□□ 0.26
UPF1-209ENST00000600310 PLEKHA6Q9Y2H5 1048 aa16.67■□□□□ 0.26
UPF1-209ENST00000600310 GPRIN2O60269 458 aa16.66■□□□□ 0.26
UPF1-209ENST00000600310 ENTPD6O75354 484 aa16.66■□□□□ 0.26
UPF1-209ENST00000600310 ABHD16AO95870 558 aa16.66■□□□□ 0.26
UPF1-209ENST00000600310 MRPL3P09001 348 aaKnown RBP16.66■□□□□ 0.26
UPF1-209ENST00000600310 OR4A8P0C604 315 aa16.66■□□□□ 0.26
UPF1-209ENST00000600310 SERPINF1P36955 418 aa16.66■□□□□ 0.26
UPF1-209ENST00000600310 CAPGP40121 348 aa16.66■□□□□ 0.26
UPF1-209ENST00000600310 NUDT6P53370 316 aa16.66■□□□□ 0.26
UPF1-209ENST00000600310 IL18R1Q13478 541 aa16.66■□□□□ 0.26
UPF1-209ENST00000600310 ZNF691Q5VV52 312 aa16.66■□□□□ 0.26
UPF1-209ENST00000600310 AGAP6Q5VW22 663 aa16.66■□□□□ 0.26
UPF1-209ENST00000600310 RHOUQ7L0Q8 258 aa16.66■□□□□ 0.26
UPF1-209ENST00000600310 C1orf174Q8IYL3 243 aa16.66■□□□□ 0.26
UPF1-209ENST00000600310 MUC15Q8N387 334 aa16.66■□□□□ 0.26
UPF1-209ENST00000600310 RNF133Q8WVZ7 376 aa16.66■□□□□ 0.26
UPF1-209ENST00000600310 VCX3BQ9H321 246 aa16.66■□□□□ 0.26
UPF1-209ENST00000600310 OR51B6Q9H340 312 aa16.66■□□□□ 0.26
UPF1-209ENST00000600310 CENPMQ9NSP4 180 aa16.66■□□□□ 0.26
UPF1-209ENST00000600310 CLN6Q9NWW5 311 aa16.66■□□□□ 0.26
UPF1-209ENST00000600310 AASSQ9UDR5 926 aa16.66■□□□□ 0.26
UPF1-209ENST00000600310 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.66■□□□□ 0.26
UPF1-209ENST00000600310 GRIP1Q9Y3R0 1128 aa16.66■□□□□ 0.26
UPF1-209ENST00000600310 CMAHPQ9Y471 501 aa16.66■□□□□ 0.26
UPF1-209ENST00000600310 RTTNQ86VV8 2226 aa16.66■□□□□ 0.26
UPF1-209ENST00000600310 FBN2P35556 2912 aa16.66■□□□□ 0.26
UPF1-209ENST00000600310 ZNF878C9JN71 531 aa16.65■□□□□ 0.26
UPF1-209ENST00000600310 CLIC3O95833 236 aa16.65■□□□□ 0.26
UPF1-209ENST00000600310 CD8AP01732 235 aa16.65■□□□□ 0.26
UPF1-209ENST00000600310 LYNP07948 512 aa16.65■□□□□ 0.26
UPF1-209ENST00000600310 SBK2P0C263 348 aa16.65■□□□□ 0.26
UPF1-209ENST00000600310 DNASE1P24855 282 aa16.65■□□□□ 0.26
UPF1-209ENST00000600310 OTX1P32242 354 aaPredicted RBP16.65■□□□□ 0.26
UPF1-209ENST00000600310 POU4F2Q12837 409 aa16.65■□□□□ 0.26
UPF1-209ENST00000600310 EFNB3Q15768 340 aa16.65■□□□□ 0.26
UPF1-209ENST00000600310 MSMPQ1L6U9 139 aa16.65■□□□□ 0.26
UPF1-209ENST00000600310 MST1LQ2TV78 715 aa16.65■□□□□ 0.26
UPF1-209ENST00000600310 RGS7BPQ6MZT1 257 aaPredicted RBP16.65■□□□□ 0.26
UPF1-209ENST00000600310 RFPL4BQ6ZWI9 263 aa16.65■□□□□ 0.26
UPF1-209ENST00000600310 CDH24Q86UP0 819 aa16.65■□□□□ 0.26
UPF1-209ENST00000600310 OR1J1Q8NGS3 322 aa16.65■□□□□ 0.26
UPF1-209ENST00000600310 THEM6Q8WUY1 208 aa16.65■□□□□ 0.26
UPF1-209ENST00000600310 PIGTQ969N2 578 aa16.65■□□□□ 0.26
UPF1-209ENST00000600310 SPTSSAQ969W0 71 aa16.65■□□□□ 0.26
UPF1-209ENST00000600310 Q96MT0 163 aa16.65■□□□□ 0.26
UPF1-209ENST00000600310 AMELYQ99218 206 aa16.65■□□□□ 0.26
UPF1-209ENST00000600310 MNTQ99583 582 aa16.65■□□□□ 0.26
UPF1-209ENST00000600310 CCL19Q99731 98 aa16.65■□□□□ 0.26
UPF1-209ENST00000600310 TRAF4Q9BUZ4 470 aaPredicted RBP16.65■□□□□ 0.26
UPF1-209ENST00000600310 CBLN4Q9NTU7 201 aa16.65■□□□□ 0.26
UPF1-209ENST00000600310 LAMP5Q9UJQ1 280 aa16.65■□□□□ 0.26
UPF1-209ENST00000600310 LAMP3Q9UQV4 416 aa16.65■□□□□ 0.26
UPF1-209ENST00000600310 KLHDC2Q9Y2U9 406 aa16.65■□□□□ 0.26
UPF1-209ENST00000600310 SNTNA6NMZ2 147 aa16.64■□□□□ 0.25
UPF1-209ENST00000600310 F5H5K5 113 aa16.64■□□□□ 0.25
UPF1-209ENST00000600310 J3QW42 95 aa16.64■□□□□ 0.25
UPF1-209ENST00000600310 NGFP01138 241 aa16.64■□□□□ 0.25
UPF1-209ENST00000600310 LCKP06239 509 aa16.64■□□□□ 0.25
UPF1-209ENST00000600310 ACSM4P0C7M7 580 aa16.64■□□□□ 0.25
UPF1-209ENST00000600310 SLC15A1P46059 708 aa16.64■□□□□ 0.25
UPF1-209ENST00000600310 RGS6P49758 472 aa16.64■□□□□ 0.25
UPF1-209ENST00000600310 HCCSP53701 268 aa16.64■□□□□ 0.25
UPF1-209ENST00000600310 AQP4P55087 323 aa16.64■□□□□ 0.25
UPF1-209ENST00000600310 GRB2P62993 217 aaKnown RBP16.64■□□□□ 0.25
UPF1-209ENST00000600310 IL5RAQ01344 420 aa16.64■□□□□ 0.25
UPF1-209ENST00000600310 TAF13Q15543 124 aa16.64■□□□□ 0.25
UPF1-209ENST00000600310 COLCA1Q6ZS62 124 aa16.64■□□□□ 0.25
UPF1-209ENST00000600310 SETD9Q8NE22 299 aa16.64■□□□□ 0.25
UPF1-209ENST00000600310 OR51G2Q8NGK0 314 aa16.64■□□□□ 0.25
UPF1-209ENST00000600310 ABHD4Q8TB40 342 aa16.64■□□□□ 0.25
UPF1-209ENST00000600310 APH1BQ8WW43 257 aa16.64■□□□□ 0.25
UPF1-209ENST00000600310 TFAP2CQ92754 450 aa16.64■□□□□ 0.25
UPF1-209ENST00000600310 MRPL24Q96A35 216 aaKnown RBP16.64■□□□□ 0.25
UPF1-209ENST00000600310 KCNJ15Q99712 375 aa16.64■□□□□ 0.25
UPF1-209ENST00000600310 COPS4Q9BT78 406 aa16.64■□□□□ 0.25
UPF1-209ENST00000600310 TMEM14AQ9Y6G1 99 aa16.64■□□□□ 0.25
UPF1-209ENST00000600310 HSPE1-MOB4S4R3N1 261 aa16.64■□□□□ 0.25
UPF1-209ENST00000600310 B9A039 149 aa16.63■□□□□ 0.25
UPF1-209ENST00000600310 M0R135 149 aa16.63■□□□□ 0.25
UPF1-209ENST00000600310 TUBG1P23258 451 aa16.63■□□□□ 0.25
UPF1-209ENST00000600310 OPRL1P41146 370 aa16.63■□□□□ 0.25
UPF1-209ENST00000600310 MTNR1AP48039 350 aa16.63■□□□□ 0.25
UPF1-209ENST00000600310 TPTEP56180 551 aa16.63■□□□□ 0.25
UPF1-209ENST00000600310 ERVS71-1P61550 626 aa16.63■□□□□ 0.25
UPF1-209ENST00000600310 PPP1CBP62140 327 aa16.63■□□□□ 0.25
UPF1-209ENST00000600310 MAD2L1BPQ15013 274 aaPredicted RBP16.63■□□□□ 0.25
UPF1-209ENST00000600310 SWI5Q1ZZU3 235 aa16.63■□□□□ 0.25
UPF1-209ENST00000600310 C11orf71Q6IPW1 123 aa16.63■□□□□ 0.25
UPF1-209ENST00000600310 SPATC1Q76KD6 591 aa16.63■□□□□ 0.25
UPF1-209ENST00000600310 SLC35F2Q8IXU6 374 aa16.63■□□□□ 0.25
UPF1-209ENST00000600310 MBD6Q96DN6 1003 aa16.63■□□□□ 0.25
UPF1-209ENST00000600310 ZNF799Q96GE5 643 aa16.63■□□□□ 0.25
UPF1-209ENST00000600310 TUBG2Q9NRH3 451 aa16.63■□□□□ 0.25
UPF1-209ENST00000600310 COPS3Q9UNS2 423 aa16.63■□□□□ 0.25
UPF1-209ENST00000600310 PLCE1Q9P212 2302 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms