RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 CRABP2P29373 138 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 FCGR2CP31995 323 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 CEACAM3P40198 252 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 CD79BP40259 229 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 MAGEA3P43357 314 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 ATP4BP51164 291 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 RIDAP52758 137 aaKnown RBP3.91□□□□□ -1.78
SMAD4-216ENST00000593223 KRTAP10-5P60370 271 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 SPCS3P61009 180 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 ABCE1P61221 599 aaKnown RBP3.91□□□□□ -1.78
SMAD4-216ENST00000593223 SRPXP78539 464 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 CDKL1Q00532 357 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 SRYQ05066 204 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 PDIA2Q13087 525 aaKnown RBP3.91□□□□□ -1.78
SMAD4-216ENST00000593223 DPYSL3Q14195 570 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 TNXAQ16473 311 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 GUK1Q16774 197 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 KLHL38Q2WGJ6 581 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 SLC22A6Q4U2R8 563 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 SAMD4BQ5PRF9 694 aaKnown RBP3.91□□□□□ -1.78
SMAD4-216ENST00000593223 UTF1Q5T230 341 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 DMKNQ6E0U4 476 aaPredicted RBP3.91□□□□□ -1.78
SMAD4-216ENST00000593223 ARMCX5Q6P1M9 558 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 DEFB128Q7Z7B8 93 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 CDC20BQ86Y33 519 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 FGFRL1Q8N441 504 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.91□□□□□ -1.78
SMAD4-216ENST00000593223 CCDC71LQ8N9Z2 235 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 ZNF738Q8NE65 137 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 B3GNT7Q8NFL0 401 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 OR2D3Q8NGH3 330 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 OR6N2Q8NGY6 317 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 TCP10LQ8TDR4 215 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 PHF10Q8WUB8 498 aaKnown RBP3.91□□□□□ -1.78
SMAD4-216ENST00000593223 SLC35C1Q96A29 364 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 RNF145Q96MT1 663 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 ZFP3Q96NJ6 502 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 COL12A1Q99715 3063 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 PRRT1Q99946 306 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 RPP25Q9BUL9 199 aaKnown RBP3.91□□□□□ -1.78
SMAD4-216ENST00000593223 GPR174Q9BXC1 333 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 TRIM4Q9C037 500 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 RACGAP1Q9H0H5 632 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 NXT1Q9UKK6 140 aaKnown RBP3.91□□□□□ -1.78
SMAD4-216ENST00000593223 ZNF337Q9Y3M9 751 aa3.91□□□□□ -1.78
SMAD4-216ENST00000593223 NOTCH2Q04721 2471 aa3.9□□□□□ -1.78
SMAD4-216ENST00000593223 POLQO75417 2590 aa3.9□□□□□ -1.78
SMAD4-216ENST00000593223 GNG14A0A1W2PPG7 69 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 A0A1W2PRF3 423 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 A0A1W2PRM7 423 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 TMEM238C9JI98 176 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 CCSO14618 274 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 PRMT5O14744 637 aaPredicted RBP3.9□□□□□ -1.79
SMAD4-216ENST00000593223 ZBTB5O15062 677 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 TAPBPO15533 448 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 B4GALT5O43286 388 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 APOEP02649 317 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 GAPDHP04406 335 aaKnown RBP3.9□□□□□ -1.79
SMAD4-216ENST00000593223 GNAO1P09471 354 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 NR2C1P13056 603 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 PGCP20142 388 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 IMPDH1P20839 514 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 CXCR2P25025 360 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 DCKP27707 260 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 ID1P41134 155 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 HTR5AP47898 357 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 P2RY1P47900 373 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 CX3CR1P49238 355 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 PEX3P56589 373 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 ERVS71-1P61550 626 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 CCL7P80098 99 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 MRPS6P82932 125 aaKnown RBP3.9□□□□□ -1.79
SMAD4-216ENST00000593223 KLRC3Q07444 240 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 C1orf61Q13536 156 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 OR1C1Q15619 314 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 ZBTB6Q15916 424 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 C3AR1Q16581 482 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 ZNF239Q16600 458 aaKnown RBP3.9□□□□□ -1.79
SMAD4-216ENST00000593223 NDUFA5Q16718 116 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 ECSCRQ19T08 205 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 HIGD2BQ4VC39 106 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 RFTN2Q52LD8 501 aaPredicted RBP3.9□□□□□ -1.79
SMAD4-216ENST00000593223 OR5M10Q6IEU7 315 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 ZNF774Q6NX45 483 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 UQCC3Q6UW78 93 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 SSX7Q7RTT5 188 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 NET1Q7Z628 596 aaPredicted RBP3.9□□□□□ -1.79
SMAD4-216ENST00000593223 ERICH1Q86X53 443 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 CACUL1Q86Y37 369 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 FUNDC1Q8IVP5 155 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 BOD1L2Q8IYS8 172 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 SPAG16Q8N0X2 631 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 KIF2BQ8N4N8 673 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 OR2AP1Q8NGE2 309 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 OR10Z1Q8NGY1 313 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 FAM110BQ8TC76 370 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 ADAMTS16Q8TE57 1224 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 CA5BP1Q8WTZ4 195 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 UPRTQ96BW1 309 aa3.9□□□□□ -1.79
SMAD4-216ENST00000593223 CMTM5Q96DZ9 223 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms