RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-233	ENST00000591622	CCL8	P80075	99 aa		13.99	□□□□□ -0.17
CIRBP-233	ENST00000591622	PSG7	Q13046	419 aa		13.99	□□□□□ -0.17
CIRBP-233	ENST00000591622	CFAP77	Q6ZQR2	320 aa		13.99	□□□□□ -0.17
CIRBP-233	ENST00000591622	OR51L1	Q8NGJ5	315 aa		13.99	□□□□□ -0.17
CIRBP-233	ENST00000591622	GTF3A	Q92664	365 aa	Known RBP	13.99	□□□□□ -0.17
CIRBP-233	ENST00000591622	POFUT1	Q9H488	388 aa		13.99	□□□□□ -0.17
CIRBP-233	ENST00000591622	CHODL	Q9H9P2	273 aa		13.99	□□□□□ -0.17
CIRBP-233	ENST00000591622	NTN4	Q9HB63	628 aa		13.99	□□□□□ -0.17
CIRBP-233	ENST00000591622	CYSLTR2	Q9NS75	346 aa		13.99	□□□□□ -0.17
CIRBP-233	ENST00000591622	CGGBP1	Q9UFW8	167 aa	Predicted RBP	13.99	□□□□□ -0.17
CIRBP-233	ENST00000591622	TVP23A	A6NH52	213 aa		13.98	□□□□□ -0.17
CIRBP-233	ENST00000591622	DEAF1	O75398	565 aa	Predicted RBP	13.98	□□□□□ -0.17
CIRBP-233	ENST00000591622	TIPRL	O75663	272 aa		13.98	□□□□□ -0.17
CIRBP-233	ENST00000591622	GYPB	P06028	91 aa		13.98	□□□□□ -0.17
CIRBP-233	ENST00000591622	TACSTD2	P09758	323 aa		13.98	□□□□□ -0.17
CIRBP-233	ENST00000591622	IGHV4-31	P0DP07	118 aa		13.98	□□□□□ -0.17
CIRBP-233	ENST00000591622	OSM	P13725	252 aa		13.98	□□□□□ -0.17
CIRBP-233	ENST00000591622	ZNF23	P17027	643 aa		13.98	□□□□□ -0.17
CIRBP-233	ENST00000591622	ZNF3	P17036	446 aa		13.98	□□□□□ -0.17
CIRBP-233	ENST00000591622	SPI1	P17947	270 aa		13.98	□□□□□ -0.17
CIRBP-233	ENST00000591622	POU1F1	P28069	291 aa		13.98	□□□□□ -0.17
CIRBP-233	ENST00000591622	ECH1	Q13011	328 aa		13.98	□□□□□ -0.17
CIRBP-233	ENST00000591622	RSPO1	Q2MKA7	263 aa	Predicted RBP	13.98	□□□□□ -0.17
CIRBP-233	ENST00000591622	C1orf146	Q5VVC0	180 aa		13.98	□□□□□ -0.17
CIRBP-233	ENST00000591622	CYB5R2	Q6BCY4	276 aa		13.98	□□□□□ -0.17
CIRBP-233	ENST00000591622	SLC27A4	Q6P1M0	643 aa		13.98	□□□□□ -0.17
CIRBP-233	ENST00000591622	SHQ1	Q6PI26	577 aa	Known RBP	13.98	□□□□□ -0.17
CIRBP-233	ENST00000591622	IQCF1	Q8N6M8	205 aa		13.98	□□□□□ -0.17
CIRBP-233	ENST00000591622	YIPF5	Q969M3	257 aa		13.98	□□□□□ -0.17
CIRBP-233	ENST00000591622	UTP4	Q969X6	686 aa	Known RBP	13.98	□□□□□ -0.17
CIRBP-233	ENST00000591622	NRBF2	Q96F24	287 aa		13.98	□□□□□ -0.17
CIRBP-233	ENST00000591622	PITX2	Q99697	317 aa		13.98	□□□□□ -0.17
CIRBP-233	ENST00000591622	ATF6B	Q99941	703 aa		13.98	□□□□□ -0.17
CIRBP-233	ENST00000591622	YAE1D1	Q9NRH1	226 aa		13.98	□□□□□ -0.17
CIRBP-233	ENST00000591622	DECR2	Q9NUI1	292 aa		13.98	□□□□□ -0.17
CIRBP-233	ENST00000591622	CR1	P17927	2039 aa		13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	ZSCAN5B	A6NJL1	495 aa		13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	TIMM8A	O60220	97 aa	Predicted RBP	13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	LILRA1	O75019	489 aa		13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	RP2	O75695	350 aa		13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	IGHV1-46	P01743	117 aa		13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	ADH4	P08319	380 aa		13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	CLU	P10909	449 aa		13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	FMO3	P31513	532 aa		13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	GZMK	P49863	264 aa		13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	TMEM33	P57088	247 aa		13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	GINS1	Q14691	196 aa		13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	TST	Q16762	297 aa	Known RBP	13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	KRTAP27-1	Q3LI81	207 aa		13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	ZMAT1	Q5H9K5	638 aa		13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	FAM209A	Q5JX71	171 aa		13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	C6orf52	Q5T4I8	152 aa		13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	ACSM5	Q6NUN0	579 aa		13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	LYPD4	Q6UWN0	246 aa		13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	ATG16L2	Q8NAA4	619 aa		13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	OR5L1	Q8NGL2	311 aa		13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	PTP4A1	Q93096	173 aa		13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	APOBEC3D	Q96AK3	386 aa	Predicted RBP	13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	HAVCR1	Q96D42	359 aa		13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	CMBL	Q96DG6	245 aa		13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	MAP6	Q96JE9	813 aa		13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	WDR76	Q9H967	626 aa		13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	PNRC2	Q9NPJ4	139 aa	Known RBP	13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	ZDHHC8	Q9ULC8	765 aa		13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622	COMMD3-BMI1	R4GMX3	469 aa		13.97	□□□□□ -0.17
CIRBP-233	ENST00000591622		A8MV72	311 aa	Predicted RBP	13.96	□□□□□ -0.17
CIRBP-233	ENST00000591622	TPD52L2	O43399	206 aa	Known RBP	13.96	□□□□□ -0.17
CIRBP-233	ENST00000591622	SPRY3	O43610	288 aa		13.96	□□□□□ -0.17
CIRBP-233	ENST00000591622	CDC14B	O60729	498 aa		13.96	□□□□□ -0.17
CIRBP-233	ENST00000591622	KITLG	P21583	273 aa		13.96	□□□□□ -0.17
CIRBP-233	ENST00000591622	RPS27	P42677	84 aa	Known RBP	13.96	□□□□□ -0.17
CIRBP-233	ENST00000591622	CRYBB2	P43320	205 aa		13.96	□□□□□ -0.17
CIRBP-233	ENST00000591622	CHN2	P52757	468 aa		13.96	□□□□□ -0.17
CIRBP-233	ENST00000591622	BLVRA	P53004	296 aa		13.96	□□□□□ -0.17
CIRBP-233	ENST00000591622	CCNI	Q14094	377 aa		13.96	□□□□□ -0.17
CIRBP-233	ENST00000591622	PCK2	Q16822	640 aa		13.96	□□□□□ -0.17
CIRBP-233	ENST00000591622	COLCA1	Q6ZS62	124 aa		13.96	□□□□□ -0.17
CIRBP-233	ENST00000591622	ZNF511	Q8NB15	262 aa		13.96	□□□□□ -0.17
CIRBP-233	ENST00000591622	DUS3L	Q96G46	650 aa	Known RBP	13.96	□□□□□ -0.17
CIRBP-233	ENST00000591622	DIRC2	Q96SL1	478 aa		13.96	□□□□□ -0.17
CIRBP-233	ENST00000591622	HCAR1	Q9BXC0	346 aa		13.96	□□□□□ -0.17
CIRBP-233	ENST00000591622	SAP30L	Q9HAJ7	183 aa		13.96	□□□□□ -0.17
CIRBP-233	ENST00000591622	MSL2	Q9HCI7	577 aa		13.96	□□□□□ -0.17
CIRBP-233	ENST00000591622	ZNF275	Q9NSD4	429 aa	Predicted RBP	13.96	□□□□□ -0.17
CIRBP-233	ENST00000591622	PURG	Q9UJV8	347 aa	Known RBP	13.96	□□□□□ -0.17
CIRBP-233	ENST00000591622	IGHV1-69-2	A0A0G2JMI3	117 aa		13.95	□□□□□ -0.18
CIRBP-233	ENST00000591622	LRP5L	A4QPB2	252 aa		13.95	□□□□□ -0.18
CIRBP-233	ENST00000591622	FAM183A	A6NL82	134 aa		13.95	□□□□□ -0.18
CIRBP-233	ENST00000591622		F5H5K5	113 aa		13.95	□□□□□ -0.18
CIRBP-233	ENST00000591622	CRLF1	O75462	422 aa		13.95	□□□□□ -0.18
CIRBP-233	ENST00000591622	ACSM4	P0C7M7	580 aa		13.95	□□□□□ -0.18
CIRBP-233	ENST00000591622	PSKH1	P11801	424 aa		13.95	□□□□□ -0.18
CIRBP-233	ENST00000591622	RAC2	P15153	192 aa		13.95	□□□□□ -0.18
CIRBP-233	ENST00000591622	GPR6	P46095	362 aa	Predicted RBP	13.95	□□□□□ -0.18
CIRBP-233	ENST00000591622	ENTPD1	P49961	510 aa		13.95	□□□□□ -0.18
CIRBP-233	ENST00000591622	CDK5	Q00535	292 aa		13.95	□□□□□ -0.18
CIRBP-233	ENST00000591622	CDK5R2	Q13319	367 aa		13.95	□□□□□ -0.18
CIRBP-233	ENST00000591622	HLX	Q14774	488 aa	Predicted RBP	13.95	□□□□□ -0.18
CIRBP-233	ENST00000591622	TRIP10	Q15642	601 aa		13.95	□□□□□ -0.18
CIRBP-233	ENST00000591622	ATP6AP1	Q15904	470 aa		13.95	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms