RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 CTSZQ9UBR2 303 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 ATPIF1Q9UII2 106 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 BAG5Q9UL15 447 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 SNX13Q9Y5W8 968 aa11.47□□□□□ -0.57
CLPTM1-208ENST00000588274 CLPSL1A2RUU4 121 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 HTR3EA5X5Y0 456 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 F5H5P2 479 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 IFNL4K9M1U5 179 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 SURF4O15260 269 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 SFTPBP07988 381 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 GATA4P43694 442 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 PITPNBP48739 271 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 RAD23AP54725 363 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 PROK1P58294 105 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 MAB21L1Q13394 359 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 RSPO1Q2MKA7 263 aaPredicted RBP11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 KRTAP27-1Q3LI81 207 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 CLEC12AQ5QGZ9 265 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 WDR25Q64LD2 544 aaPredicted RBP11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 OR2T2Q6IF00 324 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 MOGAT3Q86VF5 341 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 NRMQ8IXM6 262 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 OFCC1Q8IZS5 231 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 TMEM86BQ8N661 226 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 PCYOX1LQ8NBM8 494 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 OR8J3Q8NGG0 315 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 OR4F5Q8NH21 305 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 PTP4A1Q93096 173 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 Q96M85 177 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 TBX15Q96SF7 602 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 PKP2Q99959 881 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 RBM4BQ9BQ04 359 aaKnown RBP11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 BEX1Q9HBH7 125 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 NOX4Q9NPH5 578 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 PTTG3PQ9NZH4 202 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 ASH2LQ9UBL3 628 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 MIOXQ9UGB7 285 aa11.46□□□□□ -0.57
CLPTM1-208ENST00000588274 RYR3Q15413 4870 aa11.45□□□□□ -0.58
CLPTM1-208ENST00000588274 IQCF6A8MYZ5 107 aa11.45□□□□□ -0.58
CLPTM1-208ENST00000588274 PHYHO14832 338 aa11.45□□□□□ -0.58
CLPTM1-208ENST00000588274 TNFRSF13BO14836 293 aaPredicted RBP11.45□□□□□ -0.58
CLPTM1-208ENST00000588274 RER1O15258 196 aa11.45□□□□□ -0.58
CLPTM1-208ENST00000588274 TSPAN15O95858 294 aa11.45□□□□□ -0.58
CLPTM1-208ENST00000588274 CFHR2P36980 270 aa11.45□□□□□ -0.58
CLPTM1-208ENST00000588274 PRSS12P56730 875 aa11.45□□□□□ -0.58
CLPTM1-208ENST00000588274 FXYD6P3P58550 94 aa11.45□□□□□ -0.58
CLPTM1-208ENST00000588274 HIST1H3AP68431 136 aa11.45□□□□□ -0.58
CLPTM1-208ENST00000588274 PRKCDQ05655 676 aa11.45□□□□□ -0.58
CLPTM1-208ENST00000588274 CYBRD1Q53TN4 286 aa11.45□□□□□ -0.58
CLPTM1-208ENST00000588274 BEND6Q5SZJ8 279 aaPredicted RBP11.45□□□□□ -0.58
CLPTM1-208ENST00000588274 HIST2H3PS2Q5TEC6 136 aa11.45□□□□□ -0.58
CLPTM1-208ENST00000588274 BRICD5Q6PL45 260 aa11.45□□□□□ -0.58
CLPTM1-208ENST00000588274 COLCA1Q6ZS62 124 aa11.45□□□□□ -0.58
CLPTM1-208ENST00000588274 HIST2H3AQ71DI3 136 aa11.45□□□□□ -0.58
CLPTM1-208ENST00000588274 LINC01006Q8NI28 216 aa11.45□□□□□ -0.58
CLPTM1-208ENST00000588274 Q8TCH9 128 aa11.45□□□□□ -0.58
CLPTM1-208ENST00000588274 TNFRSF19Q9NS68 423 aa11.45□□□□□ -0.58
CLPTM1-208ENST00000588274 POMT1Q9Y6A1 747 aa11.45□□□□□ -0.58
CLPTM1-208ENST00000588274 DOCK11Q5JSL3 2073 aa11.45□□□□□ -0.58
CLPTM1-208ENST00000588274 PRSS37A4D1T9 235 aa11.44□□□□□ -0.58
CLPTM1-208ENST00000588274 J3KTA2 159 aa11.44□□□□□ -0.58
CLPTM1-208ENST00000588274 CLPXO76031 633 aa11.44□□□□□ -0.58
CLPTM1-208ENST00000588274 VIMP08670 466 aaKnown RBP11.44□□□□□ -0.58
CLPTM1-208ENST00000588274 ANOS1P23352 680 aa11.44□□□□□ -0.58
CLPTM1-208ENST00000588274 BPIFB3P59826 476 aa11.44□□□□□ -0.58
CLPTM1-208ENST00000588274 ST3GAL3Q11203 375 aa11.44□□□□□ -0.58
CLPTM1-208ENST00000588274 ANKDD1AQ495B1 522 aa11.44□□□□□ -0.58
CLPTM1-208ENST00000588274 TTMPQ5BVD1 217 aa11.44□□□□□ -0.58
CLPTM1-208ENST00000588274 C1orf94Q6P1W5 598 aa11.44□□□□□ -0.58
CLPTM1-208ENST00000588274 C17orf107Q6ZR85 190 aa11.44□□□□□ -0.58
CLPTM1-208ENST00000588274 DCDC5Q6ZRR9 648 aa11.44□□□□□ -0.58
CLPTM1-208ENST00000588274 TSEN54Q7Z6J9 526 aaKnown RBP11.44□□□□□ -0.58
CLPTM1-208ENST00000588274 OAFQ86UD1 273 aa11.44□□□□□ -0.58
CLPTM1-208ENST00000588274 ATG16L2Q8NAA4 619 aa11.44□□□□□ -0.58
CLPTM1-208ENST00000588274 C19orf18Q8NEA5 215 aa11.44□□□□□ -0.58
CLPTM1-208ENST00000588274 OR8B3Q8NGG8 313 aa11.44□□□□□ -0.58
CLPTM1-208ENST00000588274 OR1F12Q8NHA8 337 aa11.44□□□□□ -0.58
CLPTM1-208ENST00000588274 RASD2Q96D21 266 aa11.44□□□□□ -0.58
CLPTM1-208ENST00000588274 PLEKHA8Q96JA3 519 aa11.44□□□□□ -0.58
CLPTM1-208ENST00000588274 COG8Q96MW5 612 aa11.44□□□□□ -0.58
CLPTM1-208ENST00000588274 OR8B2Q96RD0 313 aa11.44□□□□□ -0.58
CLPTM1-208ENST00000588274 SMURF1Q9HCE7 757 aa11.44□□□□□ -0.58
CLPTM1-208ENST00000588274 RHCGQ9UBD6 479 aa11.44□□□□□ -0.58
CLPTM1-208ENST00000588274 CLN8Q9UBY8 286 aa11.44□□□□□ -0.58
CLPTM1-208ENST00000588274 LHFPL6Q9Y693 200 aa11.44□□□□□ -0.58
CLPTM1-208ENST00000588274 A0A087WUU8 490 aa11.43□□□□□ -0.58
CLPTM1-208ENST00000588274 CENPVL3A0A0U1RRI6 287 aa11.43□□□□□ -0.58
CLPTM1-208ENST00000588274 M0QZ24 198 aa11.43□□□□□ -0.58
CLPTM1-208ENST00000588274 AHCYL1O43865 530 aa11.43□□□□□ -0.58
CLPTM1-208ENST00000588274 HLA-DPB1P04440 258 aa11.43□□□□□ -0.58
CLPTM1-208ENST00000588274 CD14P08571 375 aa11.43□□□□□ -0.58
CLPTM1-208ENST00000588274 KDELR2P33947 212 aa11.43□□□□□ -0.58
CLPTM1-208ENST00000588274 GPR4P46093 362 aa11.43□□□□□ -0.58
CLPTM1-208ENST00000588274 SRP9P49458 86 aaKnown RBP11.43□□□□□ -0.58
CLPTM1-208ENST00000588274 RGS6P49758 472 aa11.43□□□□□ -0.58
CLPTM1-208ENST00000588274 RPL15P61313 204 aaKnown RBP11.43□□□□□ -0.58
CLPTM1-208ENST00000588274 LSM6P62312 80 aaKnown RBP11.43□□□□□ -0.58
CLPTM1-208ENST00000588274 KCNMB1Q16558 191 aa11.43□□□□□ -0.58
CLPTM1-208ENST00000588274 AGBL2Q5U5Z8 902 aa11.43□□□□□ -0.58
CLPTM1-208ENST00000588274 TBPL2Q6SJ96 375 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms