RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 CXADRP78310 365 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 CYCSP99999 105 aaKnown RBP16.63■□□□□ 0.25
DDX39A-206ENST00000587730 NR0B2Q15466 257 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 ZNF260Q3ZCT1 412 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 ACTBL2Q562R1 376 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 PAN3Q58A45 887 aaKnown RBP16.63■□□□□ 0.25
DDX39A-206ENST00000587730 PRAMEF17Q5VTA0 474 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 TTLL10Q6ZVT0 673 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 C17orf82Q86X59 251 aaPredicted RBP16.63■□□□□ 0.25
DDX39A-206ENST00000587730 MFSD8Q8NHS3 518 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 GAS2L1Q99501 681 aaPredicted RBP16.63■□□□□ 0.25
DDX39A-206ENST00000587730 SLC6A7Q99884 636 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 VRK1Q99986 396 aaPredicted RBP16.63■□□□□ 0.25
DDX39A-206ENST00000587730 KCNK15Q9H427 330 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 TAS2R3Q9NYW6 316 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 CGGBP1Q9UFW8 167 aaPredicted RBP16.63■□□□□ 0.25
DDX39A-206ENST00000587730 CD207Q9UJ71 328 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 MKL2Q9ULH7 1088 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 NPIPA1Q9UND3 350 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 CYP8B1Q9UNU6 501 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 FTCDNL1E5RQL4 147 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 PRKNO60260 465 aaPredicted RBP16.63■□□□□ 0.25
DDX39A-206ENST00000587730 H2BFMP0C1H6 154 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 ABCD3P28288 659 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 PRKXP51817 358 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 SPOCK1Q08629 439 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 CDNFQ49AH0 187 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 ZNF441Q8N8Z8 693 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 ST7LQ8TDW4 575 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 ELP5Q8TE02 316 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 RNF133Q8WVZ7 376 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 ASB10Q8WXI3 467 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 TSLPQ969D9 159 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 RTN4RQ9BZR6 473 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 GAREM1Q9H706 876 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 MOB1AQ9H8S9 216 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 FARSAQ9Y285 508 aaKnown RBP16.63■□□□□ 0.25
DDX39A-206ENST00000587730 ATG2BQ96BY7 2078 aa16.63■□□□□ 0.25
DDX39A-206ENST00000587730 LGALS8O00214 317 aa16.62■□□□□ 0.25
DDX39A-206ENST00000587730 RAD1O60671 282 aa16.62■□□□□ 0.25
DDX39A-206ENST00000587730 DUS4LO95620 317 aaKnown RBP16.62■□□□□ 0.25
DDX39A-206ENST00000587730 CHRM2P08172 466 aa16.62■□□□□ 0.25
DDX39A-206ENST00000587730 FBLP22087 321 aaKnown RBP16.62■□□□□ 0.25
DDX39A-206ENST00000587730 TAF13Q15543 124 aa16.62■□□□□ 0.25
DDX39A-206ENST00000587730 LRFN4Q6PJG9 635 aa16.62■□□□□ 0.25
DDX39A-206ENST00000587730 KLHL24Q6TFL4 600 aa16.62■□□□□ 0.25
DDX39A-206ENST00000587730 DCXRQ7Z4W1 244 aa16.62■□□□□ 0.25
DDX39A-206ENST00000587730 TRAPPC6BQ86SZ2 158 aa16.62■□□□□ 0.25
DDX39A-206ENST00000587730 FJX1Q86VR8 437 aa16.62■□□□□ 0.25
DDX39A-206ENST00000587730 GUCD1Q96NT3 240 aa16.62■□□□□ 0.25
DDX39A-206ENST00000587730 B3GNT4Q9C0J1 378 aa16.62■□□□□ 0.25
DDX39A-206ENST00000587730 BARX1Q9HBU1 254 aaPredicted RBP16.62■□□□□ 0.25
DDX39A-206ENST00000587730 IFT46Q9NQC8 304 aa16.62■□□□□ 0.25
DDX39A-206ENST00000587730 CUL9Q8IWT3 2517 aa16.62■□□□□ 0.25
DDX39A-206ENST00000587730 C9orf170A2RU37 121 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 TMEM235A6NFC5 223 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 ALOX12BO75342 701 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 STK17BO94768 372 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 APOC3P02656 99 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 IFNA6P05013 189 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 GP1BAP07359 652 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 ZNF28P17035 718 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 APOBEC1P41238 236 aaKnown RBP16.61■□□□□ 0.25
DDX39A-206ENST00000587730 ARL4DP49703 201 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 IL13RA1P78552 427 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 HSD11B2P80365 405 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 SNTB1Q13884 538 aaKnown RBP16.61■□□□□ 0.25
DDX39A-206ENST00000587730 ZNF813Q6ZN06 617 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 H1FNTQ75WM6 255 aaPredicted RBP16.61■□□□□ 0.25
DDX39A-206ENST00000587730 OR2W3Q7Z3T1 314 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 OR52H1Q8NGJ2 320 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 OR5D14Q8NGL3 314 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 PPP1R1CQ8WVI7 109 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 ARPC5LQ9BPX5 153 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 ZNF471Q9BX82 626 aaPredicted RBP16.61■□□□□ 0.25
DDX39A-206ENST00000587730 SLC5A6Q9Y289 635 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 ATP6V1G2-DDX39BF2Z307 99 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 RAB27BO00194 218 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 ABCD4O14678 606 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 ZNF208O43345 1280 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 RAB3AP20336 220 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 LUMP51884 338 aaPredicted RBP16.61■□□□□ 0.25
DDX39A-206ENST00000587730 GFERP55789 205 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 ZP2Q05996 745 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 NSDHLQ15738 373 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 CFAP77Q6ZQR2 320 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 OR10H5Q8NGA6 315 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 OR51A2Q8NGJ7 313 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 STOML3Q8TAV4 291 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 PPP1R14AQ96A00 147 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 SCGB3A2Q96PL1 93 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 KCNK17Q96T54 332 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 KLHDC3Q9BQ90 382 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 ZNF304Q9HCX3 659 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 FANCFQ9NPI8 374 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 VSIG4Q9Y279 399 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 RHBDD3Q9Y3P4 386 aa16.61■□□□□ 0.25
DDX39A-206ENST00000587730 COL5A1P20908 1838 aaPredicted RBP16.6■□□□□ 0.25
DDX39A-206ENST00000587730 TMEM265A0A087WTH1 108 aa16.6■□□□□ 0.25
DDX39A-206ENST00000587730 ANKUB1A6NFN9 424 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms