RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 SRP9P49458 86 aaKnown RBP11.75□□□□□ -0.53
DNMT1-213ENST00000587604 HLXQ14774 488 aaPredicted RBP11.75□□□□□ -0.53
DNMT1-213ENST00000587604 ZNF181Q2M3W8 571 aa11.75□□□□□ -0.53
DNMT1-213ENST00000587604 ZBED5Q49AG3 693 aa11.75□□□□□ -0.53
DNMT1-213ENST00000587604 CCDC92Q53HC0 331 aaPredicted RBP11.75□□□□□ -0.53
DNMT1-213ENST00000587604 MESTQ5EB52 335 aa11.75□□□□□ -0.53
DNMT1-213ENST00000587604 OR2T2Q6IF00 324 aa11.75□□□□□ -0.53
DNMT1-213ENST00000587604 TMPRSS11FQ6ZWK6 438 aa11.75□□□□□ -0.53
DNMT1-213ENST00000587604 SPATC1Q76KD6 591 aa11.75□□□□□ -0.53
DNMT1-213ENST00000587604 FAM122BQ7Z309 247 aa11.75□□□□□ -0.53
DNMT1-213ENST00000587604 OR2T12Q8NG77 320 aa11.75□□□□□ -0.53
DNMT1-213ENST00000587604 OR10AD1Q8NGE0 317 aa11.75□□□□□ -0.53
DNMT1-213ENST00000587604 OR10S1Q8NGN2 331 aa11.75□□□□□ -0.53
DNMT1-213ENST00000587604 NEIL1Q96FI4 390 aaPredicted RBP11.75□□□□□ -0.53
DNMT1-213ENST00000587604 ZNF582Q96NG8 517 aaPredicted RBP11.75□□□□□ -0.53
DNMT1-213ENST00000587604 TMEM246Q9BRR3 403 aa11.75□□□□□ -0.53
DNMT1-213ENST00000587604 ASH2LQ9UBL3 628 aa11.75□□□□□ -0.53
DNMT1-213ENST00000587604 ATPIF1Q9UII2 106 aa11.75□□□□□ -0.53
DNMT1-213ENST00000587604 SNX13Q9Y5W8 968 aa11.75□□□□□ -0.53
DNMT1-213ENST00000587604 A0A087WUU8 490 aa11.74□□□□□ -0.53
DNMT1-213ENST00000587604 TRAV40A0A0B4J280 105 aa11.74□□□□□ -0.53
DNMT1-213ENST00000587604 J3KTA2 159 aa11.74□□□□□ -0.53
DNMT1-213ENST00000587604 CDC42EP2O14613 210 aa11.74□□□□□ -0.53
DNMT1-213ENST00000587604 HOXA3O43365 443 aaPredicted RBP11.74□□□□□ -0.53
DNMT1-213ENST00000587604 SLC16A7O60669 478 aa11.74□□□□□ -0.53
DNMT1-213ENST00000587604 KHDRBS3O75525 346 aaKnown RBP11.74□□□□□ -0.53
DNMT1-213ENST00000587604 IFNW1P05000 195 aa11.74□□□□□ -0.53
DNMT1-213ENST00000587604 DBHP09172 617 aa11.74□□□□□ -0.53
DNMT1-213ENST00000587604 ZNF26P17031 533 aaPredicted RBP11.74□□□□□ -0.53
DNMT1-213ENST00000587604 OMGP23515 440 aa11.74□□□□□ -0.53
DNMT1-213ENST00000587604 BPIFB3P59826 476 aa11.74□□□□□ -0.53
DNMT1-213ENST00000587604 ZNF404Q494X3 552 aa11.74□□□□□ -0.53
DNMT1-213ENST00000587604 MIDNQ504T8 468 aa11.74□□□□□ -0.53
DNMT1-213ENST00000587604 ZNF362Q5T0B9 420 aaPredicted RBP11.74□□□□□ -0.53
DNMT1-213ENST00000587604 TBPL2Q6SJ96 375 aa11.74□□□□□ -0.53
DNMT1-213ENST00000587604 ZNF730Q6ZMV8 503 aa11.74□□□□□ -0.53
DNMT1-213ENST00000587604 MBOAT2Q6ZWT7 520 aa11.74□□□□□ -0.53
DNMT1-213ENST00000587604 NLRC3Q7RTR2 1065 aa11.74□□□□□ -0.53
DNMT1-213ENST00000587604 VTCN1Q7Z7D3 282 aa11.74□□□□□ -0.53
DNMT1-213ENST00000587604 GLB1L2Q8IW92 636 aa11.74□□□□□ -0.53
DNMT1-213ENST00000587604 C1orf87Q8N0U7 546 aa11.74□□□□□ -0.53
DNMT1-213ENST00000587604 OR8B3Q8NGG8 313 aa11.74□□□□□ -0.53
DNMT1-213ENST00000587604 ZDHHC16Q969W1 377 aa11.74□□□□□ -0.53
DNMT1-213ENST00000587604 APOBEC3DQ96AK3 386 aaPredicted RBP11.74□□□□□ -0.53
DNMT1-213ENST00000587604 ZNF570Q96NI8 536 aa11.74□□□□□ -0.53
DNMT1-213ENST00000587604 OR8B2Q96RD0 313 aa11.74□□□□□ -0.53
DNMT1-213ENST00000587604 SLC30A2Q9BRI3 323 aa11.74□□□□□ -0.53
DNMT1-213ENST00000587604 NDEL1Q9GZM8 345 aa11.74□□□□□ -0.53
DNMT1-213ENST00000587604 NMNAT1Q9HAN9 279 aaPredicted RBP11.74□□□□□ -0.53
DNMT1-213ENST00000587604 GID8Q9NWU2 228 aa11.74□□□□□ -0.53
DNMT1-213ENST00000587604 PTTG3PQ9NZH4 202 aa11.74□□□□□ -0.53
DNMT1-213ENST00000587604 COA3Q9Y2R0 106 aaPredicted RBP11.74□□□□□ -0.53
DNMT1-213ENST00000587604 MDFIC2A0A1B0GVS7 189 aa11.73□□□□□ -0.53
DNMT1-213ENST00000587604 ELOVL7A1L3X0 281 aa11.73□□□□□ -0.53
DNMT1-213ENST00000587604 HMGB1P1B2RPK0 211 aaPredicted RBP11.73□□□□□ -0.53
DNMT1-213ENST00000587604 SRRM5B3KS81 715 aa11.73□□□□□ -0.53
DNMT1-213ENST00000587604 H0YL77 283 aa11.73□□□□□ -0.53
DNMT1-213ENST00000587604 RER1O15258 196 aa11.73□□□□□ -0.53
DNMT1-213ENST00000587604 GPR4P46093 362 aa11.73□□□□□ -0.53
DNMT1-213ENST00000587604 PITPNBP48739 271 aa11.73□□□□□ -0.53
DNMT1-213ENST00000587604 KLF10Q13118 480 aa11.73□□□□□ -0.53
DNMT1-213ENST00000587604 MAPRE2Q15555 327 aa11.73□□□□□ -0.53
DNMT1-213ENST00000587604 KCNMB1Q16558 191 aa11.73□□□□□ -0.53
DNMT1-213ENST00000587604 DEFB112Q30KQ8 113 aa11.73□□□□□ -0.53
DNMT1-213ENST00000587604 OTPQ5XKR4 325 aa11.73□□□□□ -0.53
DNMT1-213ENST00000587604 GPR139Q6DWJ6 353 aa11.73□□□□□ -0.53
DNMT1-213ENST00000587604 RRM2BQ7LG56 351 aa11.73□□□□□ -0.53
DNMT1-213ENST00000587604 MOGAT3Q86VF5 341 aa11.73□□□□□ -0.53
DNMT1-213ENST00000587604 NUDT16L1Q9BRJ7 211 aaKnown RBP11.73□□□□□ -0.53
DNMT1-213ENST00000587604 TMEM120AQ9BXJ8 343 aa11.73□□□□□ -0.53
DNMT1-213ENST00000587604 SYT4Q9H2B2 425 aa11.73□□□□□ -0.53
DNMT1-213ENST00000587604 RERGLQ9H628 205 aa11.73□□□□□ -0.53
DNMT1-213ENST00000587604 BEX1Q9HBH7 125 aa11.73□□□□□ -0.53
DNMT1-213ENST00000587604 NOX4Q9NPH5 578 aa11.73□□□□□ -0.53
DNMT1-213ENST00000587604 TMEM100Q9NV29 134 aa11.73□□□□□ -0.53
DNMT1-213ENST00000587604 LOC100653049A0A140TA62 436 aa11.72□□□□□ -0.53
DNMT1-213ENST00000587604 A0A1B0GWJ7 208 aa11.72□□□□□ -0.53
DNMT1-213ENST00000587604 FAM181BA6NEQ2 426 aa11.72□□□□□ -0.53
DNMT1-213ENST00000587604 IQCF6A8MYZ5 107 aa11.72□□□□□ -0.53
DNMT1-213ENST00000587604 F5H5P2 479 aa11.72□□□□□ -0.53
DNMT1-213ENST00000587604 MLNRO43193 412 aa11.72□□□□□ -0.53
DNMT1-213ENST00000587604 PTP4A3O75365 173 aa11.72□□□□□ -0.53
DNMT1-213ENST00000587604 KRT34O76011 436 aa11.72□□□□□ -0.53
DNMT1-213ENST00000587604 KNG1P01042 644 aa11.72□□□□□ -0.53
DNMT1-213ENST00000587604 CRYBA1P05813 215 aa11.72□□□□□ -0.53
DNMT1-213ENST00000587604 SDHAP31040 664 aa11.72□□□□□ -0.53
DNMT1-213ENST00000587604 PMELP40967 661 aa11.72□□□□□ -0.53
DNMT1-213ENST00000587604 KRR1Q13601 381 aaKnown RBP11.72□□□□□ -0.53
DNMT1-213ENST00000587604 GPR157Q5UAW9 335 aa11.72□□□□□ -0.53
DNMT1-213ENST00000587604 BRD3OSQ6XYD6 125 aa11.72□□□□□ -0.53
DNMT1-213ENST00000587604 Q6YL49 198 aa11.72□□□□□ -0.53
DNMT1-213ENST00000587604 C17orf107Q6ZR85 190 aa11.72□□□□□ -0.53
DNMT1-213ENST00000587604 FITM2Q8N6M3 262 aa11.72□□□□□ -0.53
DNMT1-213ENST00000587604 GJC3Q8NFK1 279 aa11.72□□□□□ -0.53
DNMT1-213ENST00000587604 OR4F5Q8NH21 305 aa11.72□□□□□ -0.53
DNMT1-213ENST00000587604 NRIP3Q9NQ35 241 aa11.72□□□□□ -0.53
DNMT1-213ENST00000587604 VSX1Q9NZR4 365 aaPredicted RBP11.72□□□□□ -0.53
DNMT1-213ENST00000587604 CLN8Q9UBY8 286 aa11.72□□□□□ -0.53
DNMT1-213ENST00000587604 AP3M1Q9Y2T2 418 aa11.72□□□□□ -0.53
DNMT1-213ENST00000587604 CMYA5Q8N3K9 4069 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms