RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 GJC3Q8NFK1 279 aa9.18□□□□□ -0.94
LIG3-203ENST00000585370 SLAMF6Q96DU3 332 aa9.18□□□□□ -0.94
LIG3-203ENST00000585370 FOXN4Q96NZ1 517 aa9.18□□□□□ -0.94
LIG3-203ENST00000585370 DERL3Q96Q80 235 aa9.18□□□□□ -0.94
LIG3-203ENST00000585370 AMELYQ99218 206 aa9.18□□□□□ -0.94
LIG3-203ENST00000585370 ATF6BQ99941 703 aa9.18□□□□□ -0.94
LIG3-203ENST00000585370 ULBP2Q9BZM5 246 aa9.18□□□□□ -0.94
LIG3-203ENST00000585370 LINC00470Q9BZP3 86 aa9.18□□□□□ -0.94
LIG3-203ENST00000585370 LDAHQ9H6V9 325 aa9.18□□□□□ -0.94
LIG3-203ENST00000585370 MOB1AQ9H8S9 216 aa9.18□□□□□ -0.94
LIG3-203ENST00000585370 ZDHHC11Q9H8X9 412 aa9.18□□□□□ -0.94
LIG3-203ENST00000585370 GP6Q9HCN6 339 aa9.18□□□□□ -0.94
LIG3-203ENST00000585370 TCF7L1Q9HCS4 588 aa9.18□□□□□ -0.94
LIG3-203ENST00000585370 ABCB9Q9NP78 766 aa9.18□□□□□ -0.94
LIG3-203ENST00000585370 NOX4Q9NPH5 578 aa9.18□□□□□ -0.94
LIG3-203ENST00000585370 CENPMQ9NSP4 180 aa9.18□□□□□ -0.94
LIG3-203ENST00000585370 GDF2Q9UK05 429 aaPredicted RBP9.18□□□□□ -0.94
LIG3-203ENST00000585370 TRBV5-7A0A0A0MS05 114 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 TRGV5A0A0B4J1U4 118 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 TMEM269A0A1B0GVZ9 245 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 SHISA3A0PJX4 238 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 MEGF11A6BM72 1044 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 FABP12A6NFH5 140 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 SRSF10O75494 262 aaKnown RBP9.17□□□□□ -0.94
LIG3-203ENST00000585370 UPK1BO75841 260 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 OCM2P0CE71 109 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 UBCP0CG48 685 aaKnown RBP9.17□□□□□ -0.94
LIG3-203ENST00000585370 PSKH1P11801 424 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 KLK2P20151 261 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 ACHEP22303 614 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 SCAND1P57086 179 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 SGCAQ16586 387 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 RGS21Q2M5E4 152 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 NRN1LQ496H8 165 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 WDR38Q5JTN6 314 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 IDNKQ5T6J7 187 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 FAM27BQ5VT28 67 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 SFXN4Q6P4A7 337 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 IGFL3Q6UXB1 125 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 SYT9Q86SS6 491 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 PRSS35Q8N3Z0 413 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 ZADH2Q8N4Q0 377 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 GDPD1Q8N9F7 314 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 CCDC54Q8NEL0 328 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 PRR7Q8TB68 274 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 ROBO4Q8WZ75 1007 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 SNRNP40Q96DI7 357 aaKnown RBP9.17□□□□□ -0.94
LIG3-203ENST00000585370 DIRAS2Q96HU8 199 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 OR14A2Q96R54 314 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 RBM24Q9BX46 236 aaKnown RBP9.17□□□□□ -0.94
LIG3-203ENST00000585370 PRRG4Q9BZD6 226 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 PPIL3Q9H2H8 161 aaKnown RBP9.17□□□□□ -0.94
LIG3-203ENST00000585370 SLC6A15Q9H2J7 730 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 EXO5Q9H790 373 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 COMMD3Q9UBI1 195 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 ING1Q9UK53 422 aaPredicted RBP9.17□□□□□ -0.94
LIG3-203ENST00000585370 OR52A1Q9UKL2 312 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 HHLA2Q9UM44 414 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 FOXJ3Q9UPW0 622 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 LHFPL6Q9Y693 200 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 ALPK2Q86TB3 2170 aa9.17□□□□□ -0.94
LIG3-203ENST00000585370 A1L4Q6 167 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 WIPF3A6NGB9 483 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 H0YC42 278 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 MRPL33O75394 65 aaKnown RBP9.16□□□□□ -0.94
LIG3-203ENST00000585370 IGHG3P01860 377 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 CST2P09228 141 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 EPXP11678 715 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 HSD11B1P28845 292 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 KIR3DL2P43630 455 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 EVX1P49640 407 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 SELENOPP49908 381 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 DEFA1P59665 94 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 DEFA3P59666 94 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 PCBD1P61457 104 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 HIST1H3AP68431 136 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 ECH1Q13011 328 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 CEP78Q5JTW2 689 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 HIST2H3PS2Q5TEC6 136 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 OR7E24Q6IFN5 339 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 HIST2H3AQ71DI3 136 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 LRRC28Q86X40 367 aaPredicted RBP9.16□□□□□ -0.94
LIG3-203ENST00000585370 LINC00346Q8IVM7 164 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 MCEMP1Q8IX19 187 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 ELMOD2Q8IZ81 293 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 CISD2Q8N5K1 135 aaKnown RBP9.16□□□□□ -0.94
LIG3-203ENST00000585370 IL17RDQ8NFM7 739 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 OR13C5Q8NGS8 318 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 RGP1Q92546 391 aaPredicted RBP9.16□□□□□ -0.94
LIG3-203ENST00000585370 BCO1Q9HAY6 547 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 GLRX2Q9NS18 164 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 ASF1BQ9NVP2 202 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 CKLFQ9UBR5 152 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 DHDHQ9UQ10 334 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 NOSIPQ9Y314 301 aaKnown RBP9.16□□□□□ -0.94
LIG3-203ENST00000585370 ZNF175Q9Y473 711 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 V9GY05 133 aa9.16□□□□□ -0.94
LIG3-203ENST00000585370 DIDO1Q9BTC0 2240 aaKnown RBP9.16□□□□□ -0.94
LIG3-203ENST00000585370 SVILO95425 2214 aa9.15□□□□□ -0.94
LIG3-203ENST00000585370 A0A0G2JK05 382 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms