RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 GINS1Q14691 196 aa20.46■□□□□ 0.87
LIMD2-207ENST00000579329 TMEM154Q6P9G4 183 aa20.46■□□□□ 0.87
LIMD2-207ENST00000579329 CFAP77Q6ZQR2 320 aa20.46■□□□□ 0.87
LIMD2-207ENST00000579329 ZNF786Q8N393 782 aa20.46■□□□□ 0.87
LIMD2-207ENST00000579329 ZNRF4Q8WWF5 429 aa20.46■□□□□ 0.87
LIMD2-207ENST00000579329 PITX2Q99697 317 aa20.46■□□□□ 0.87
LIMD2-207ENST00000579329 TLN2Q9Y4G6 2542 aa20.45■□□□□ 0.86
LIMD2-207ENST00000579329 TVP23AA6NH52 213 aa20.45■□□□□ 0.86
LIMD2-207ENST00000579329 HMGN1P05114 100 aa20.45■□□□□ 0.86
LIMD2-207ENST00000579329 GYPBP06028 91 aa20.45■□□□□ 0.86
LIMD2-207ENST00000579329 DBHP09172 617 aa20.45■□□□□ 0.86
LIMD2-207ENST00000579329 FMO3P31513 532 aa20.45■□□□□ 0.86
LIMD2-207ENST00000579329 BLVRAP53004 296 aa20.45■□□□□ 0.86
LIMD2-207ENST00000579329 ECH1Q13011 328 aa20.45■□□□□ 0.86
LIMD2-207ENST00000579329 FAHD1Q6P587 224 aa20.45■□□□□ 0.86
LIMD2-207ENST00000579329 HIPK1Q86Z02 1210 aa20.45■□□□□ 0.86
LIMD2-207ENST00000579329 ZNF540Q8NDQ6 660 aa20.45■□□□□ 0.86
LIMD2-207ENST00000579329 PAPOLBQ9NRJ5 636 aaKnown RBP20.45■□□□□ 0.86
LIMD2-207ENST00000579329 COMMD3-BMI1R4GMX3 469 aa20.45■□□□□ 0.86
LIMD2-207ENST00000579329 CR1P17927 2039 aa20.44■□□□□ 0.86
LIMD2-207ENST00000579329 CLUP10909 449 aa20.44■□□□□ 0.86
LIMD2-207ENST00000579329 PAICSP22234 425 aaKnown RBP20.44■□□□□ 0.86
LIMD2-207ENST00000579329 NR4A2P43354 598 aa20.44■□□□□ 0.86
LIMD2-207ENST00000579329 CDK5Q00535 292 aa20.44■□□□□ 0.86
LIMD2-207ENST00000579329 PCGF3Q3KNV8 242 aa20.44■□□□□ 0.86
LIMD2-207ENST00000579329 ACSM5Q6NUN0 579 aa20.44■□□□□ 0.86
LIMD2-207ENST00000579329 LYPD4Q6UWN0 246 aa20.44■□□□□ 0.86
LIMD2-207ENST00000579329 OR6K6Q8NGW6 343 aa20.44■□□□□ 0.86
LIMD2-207ENST00000579329 ATF6BQ99941 703 aa20.44■□□□□ 0.86
LIMD2-207ENST00000579329 TEX12Q9BXU0 123 aa20.44■□□□□ 0.86
LIMD2-207ENST00000579329 SLC25A19Q9HC21 320 aa20.44■□□□□ 0.86
LIMD2-207ENST00000579329 CGGBP1Q9UFW8 167 aaPredicted RBP20.44■□□□□ 0.86
LIMD2-207ENST00000579329 CSPG4Q6UVK1 2322 aa20.43■□□□□ 0.86
LIMD2-207ENST00000579329 PLSCR5A0PG75 271 aa20.43■□□□□ 0.86
LIMD2-207ENST00000579329 HPXP02790 462 aa20.43■□□□□ 0.86
LIMD2-207ENST00000579329 USF1P22415 310 aaPredicted RBP20.43■□□□□ 0.86
LIMD2-207ENST00000579329 GIFP27352 417 aa20.43■□□□□ 0.86
LIMD2-207ENST00000579329 ENTPD1P49961 510 aa20.43■□□□□ 0.86
LIMD2-207ENST00000579329 PARP8Q8N3A8 854 aa20.43■□□□□ 0.86
LIMD2-207ENST00000579329 RDH5Q92781 318 aa20.43■□□□□ 0.86
LIMD2-207ENST00000579329 APOBEC3DQ96AK3 386 aaPredicted RBP20.43■□□□□ 0.86
LIMD2-207ENST00000579329 OTULINQ96BN8 352 aa20.43■□□□□ 0.86
LIMD2-207ENST00000579329 POFUT1Q9H488 388 aa20.43■□□□□ 0.86
LIMD2-207ENST00000579329 WDR76Q9H967 626 aa20.43■□□□□ 0.86
LIMD2-207ENST00000579329 PNRC2Q9NPJ4 139 aaKnown RBP20.43■□□□□ 0.86
LIMD2-207ENST00000579329 CYSLTR2Q9NS75 346 aa20.43■□□□□ 0.86
LIMD2-207ENST00000579329 NKIRAS2Q9NYR9 191 aa20.43■□□□□ 0.86
LIMD2-207ENST00000579329 STARD10Q9Y365 291 aa20.43■□□□□ 0.86
LIMD2-207ENST00000579329 FAM183AA6NL82 134 aa20.42■□□□□ 0.86
LIMD2-207ENST00000579329 G3V2T6 193 aa20.42■□□□□ 0.86
LIMD2-207ENST00000579329 SURF4O15260 269 aa20.42■□□□□ 0.86
LIMD2-207ENST00000579329 ZNF23P17027 643 aa20.42■□□□□ 0.86
LIMD2-207ENST00000579329 LIPAP38571 399 aa20.42■□□□□ 0.86
LIMD2-207ENST00000579329 RPS27P42677 84 aaKnown RBP20.42■□□□□ 0.86
LIMD2-207ENST00000579329 MAGEB1P43366 347 aa20.42■□□□□ 0.86
LIMD2-207ENST00000579329 DAPP51397 102 aa20.42■□□□□ 0.86
LIMD2-207ENST00000579329 ZNF81P51508 661 aa20.42■□□□□ 0.86
LIMD2-207ENST00000579329 KRTAP1-1Q07627 177 aa20.42■□□□□ 0.86
LIMD2-207ENST00000579329 GGTLC2Q14390 218 aa20.42■□□□□ 0.86
LIMD2-207ENST00000579329 KRTAP27-1Q3LI81 207 aa20.42■□□□□ 0.86
LIMD2-207ENST00000579329 TMEM255AQ5JRV8 349 aa20.42■□□□□ 0.86
LIMD2-207ENST00000579329 AMIGO2Q86SJ2 522 aa20.42■□□□□ 0.86
LIMD2-207ENST00000579329 ZDHHC13Q8IUH4 622 aa20.42■□□□□ 0.86
LIMD2-207ENST00000579329 ZNF511Q8NB15 262 aa20.42■□□□□ 0.86
LIMD2-207ENST00000579329 OR5L1Q8NGL2 311 aa20.42■□□□□ 0.86
LIMD2-207ENST00000579329 LRTOMTQ8WZ04 291 aa20.42■□□□□ 0.86
LIMD2-207ENST00000579329 GTF3AQ92664 365 aaKnown RBP20.42■□□□□ 0.86
LIMD2-207ENST00000579329 MAP6Q96JE9 813 aa20.42■□□□□ 0.86
LIMD2-207ENST00000579329 HCAR1Q9BXC0 346 aa20.42■□□□□ 0.86
LIMD2-207ENST00000579329 BPESC1Q9GZL8 116 aa20.42■□□□□ 0.86
LIMD2-207ENST00000579329 MED20Q9H944 212 aa20.42■□□□□ 0.86
LIMD2-207ENST00000579329 CHD3Q12873 2000 aaKnown RBP20.41■□□□□ 0.86
LIMD2-207ENST00000579329 PRR23D1E9PI22 279 aaPredicted RBP20.41■□□□□ 0.86
LIMD2-207ENST00000579329 TIMM8AO60220 97 aaPredicted RBP20.41■□□□□ 0.86
LIMD2-207ENST00000579329 NCR1O76036 304 aa20.41■□□□□ 0.86
LIMD2-207ENST00000579329 SPARCP09486 303 aa20.41■□□□□ 0.86
LIMD2-207ENST00000579329 PRR23D2P0DMB1 279 aaPredicted RBP20.41■□□□□ 0.86
LIMD2-207ENST00000579329 MMP15P51511 669 aa20.41■□□□□ 0.86
LIMD2-207ENST00000579329 CRISP1P54107 249 aa20.41■□□□□ 0.86
LIMD2-207ENST00000579329 MRPS11P82912 194 aaKnown RBP20.41■□□□□ 0.86
LIMD2-207ENST00000579329 PSG7Q13046 419 aa20.41■□□□□ 0.86
LIMD2-207ENST00000579329 ZMAT1Q5H9K5 638 aa20.41■□□□□ 0.86
LIMD2-207ENST00000579329 TEX30Q5JUR7 227 aa20.41■□□□□ 0.86
LIMD2-207ENST00000579329 LINC01590Q5TEZ4 76 aa20.41■□□□□ 0.86
LIMD2-207ENST00000579329 PLEKHA8Q96JA3 519 aa20.41■□□□□ 0.86
LIMD2-207ENST00000579329 GABARAPL1Q9H0R8 117 aa20.41■□□□□ 0.86
LIMD2-207ENST00000579329 LYNX1G3V0Z9 82 aa20.4■□□□□ 0.86
LIMD2-207ENST00000579329 GLCEO94923 617 aa20.4■□□□□ 0.86
LIMD2-207ENST00000579329 LYNX1P0DP58 116 aa20.4■□□□□ 0.86
LIMD2-207ENST00000579329 ACHEP22303 614 aa20.4■□□□□ 0.86
LIMD2-207ENST00000579329 ACTR3P61158 418 aa20.4■□□□□ 0.86
LIMD2-207ENST00000579329 PCK2Q16822 640 aa20.4■□□□□ 0.86
LIMD2-207ENST00000579329 TMEM249Q2WGJ8 235 aa20.4■□□□□ 0.86
LIMD2-207ENST00000579329 PLBD1Q6P4A8 553 aa20.4■□□□□ 0.86
LIMD2-207ENST00000579329 DCXRQ7Z4W1 244 aa20.4■□□□□ 0.86
LIMD2-207ENST00000579329 PTP4A1Q93096 173 aa20.4■□□□□ 0.86
LIMD2-207ENST00000579329 CMBLQ96DG6 245 aa20.4■□□□□ 0.86
LIMD2-207ENST00000579329 MDFIQ99750 246 aa20.4■□□□□ 0.86
LIMD2-207ENST00000579329 CHODLQ9H9P2 273 aa20.4■□□□□ 0.86
LIMD2-207ENST00000579329 KRT84Q9NSB2 600 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms