RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 NPIPA3F8WFD2 350 aa17.97■□□□□ 0.47
SMG8-203ENST00000578922 SMAD9O15198 467 aaKnown RBP17.97■□□□□ 0.47
SMG8-203ENST00000578922 PGA4P0DJD7 388 aa17.97■□□□□ 0.47
SMG8-203ENST00000578922 PGA3P0DJD8 388 aa17.97■□□□□ 0.47
SMG8-203ENST00000578922 DNM1P34Q6PK57 102 aa17.97■□□□□ 0.47
SMG8-203ENST00000578922 ESPNLQ6ZVH7 1005 aa17.97■□□□□ 0.47
SMG8-203ENST00000578922 FGD2Q7Z6J4 655 aa17.97■□□□□ 0.47
SMG8-203ENST00000578922 NOXO1Q8NFA2 376 aa17.97■□□□□ 0.47
SMG8-203ENST00000578922 ZFP3Q96NJ6 502 aa17.97■□□□□ 0.47
SMG8-203ENST00000578922 MRM2Q9UI43 246 aaKnown RBP17.97■□□□□ 0.47
SMG8-203ENST00000578922 ITGB2P05107 769 aa17.96■□□□□ 0.47
SMG8-203ENST00000578922 HPNP05981 417 aa17.96■□□□□ 0.47
SMG8-203ENST00000578922 H2AFB2P0C5Z0 115 aa17.96■□□□□ 0.47
SMG8-203ENST00000578922 ALOX5APP20292 161 aa17.96■□□□□ 0.47
SMG8-203ENST00000578922 EDNRAP25101 427 aa17.96■□□□□ 0.47
SMG8-203ENST00000578922 RAC3P60763 192 aa17.96■□□□□ 0.47
SMG8-203ENST00000578922 PPIAP62937 165 aaKnown RBP17.96■□□□□ 0.47
SMG8-203ENST00000578922 IKZF1Q13422 519 aa17.96■□□□□ 0.47
SMG8-203ENST00000578922 SNTB2Q13425 540 aaKnown RBP17.96■□□□□ 0.47
SMG8-203ENST00000578922 KLF9Q13886 244 aaPredicted RBP17.96■□□□□ 0.47
SMG8-203ENST00000578922 OR56B4Q8NH76 319 aa17.96■□□□□ 0.47
SMG8-203ENST00000578922 OR2V1Q8NHB1 315 aa17.96■□□□□ 0.47
SMG8-203ENST00000578922 OTOSQ8NHW6 89 aa17.96■□□□□ 0.47
SMG8-203ENST00000578922 RPS4Y2Q8TD47 263 aa17.96■□□□□ 0.47
SMG8-203ENST00000578922 ZNF845Q96IR2 970 aaPredicted RBP17.96■□□□□ 0.47
SMG8-203ENST00000578922 MRI1Q9BV20 369 aa17.96■□□□□ 0.47
SMG8-203ENST00000578922 ZNF222Q9UK12 451 aa17.96■□□□□ 0.47
SMG8-203ENST00000578922 PCDHGA9Q9Y5G4 932 aaKnown RBP17.96■□□□□ 0.47
SMG8-203ENST00000578922 ZNF407Q9C0G0 2248 aa17.96■□□□□ 0.47
SMG8-203ENST00000578922 NOS1APO75052 506 aaPredicted RBP17.96■□□□□ 0.46
SMG8-203ENST00000578922 KHDRBS3O75525 346 aaKnown RBP17.96■□□□□ 0.46
SMG8-203ENST00000578922 OR3A3P47888 321 aa17.96■□□□□ 0.46
SMG8-203ENST00000578922 GSG1Q2KHT4 349 aa17.96■□□□□ 0.46
SMG8-203ENST00000578922 ZNF684Q5T5D7 378 aa17.96■□□□□ 0.46
SMG8-203ENST00000578922 ZBTB37Q5TC79 503 aa17.96■□□□□ 0.46
SMG8-203ENST00000578922 PLXDC2Q6UX71 529 aa17.96■□□□□ 0.46
SMG8-203ENST00000578922 OR9K2Q8NGE7 335 aa17.96■□□□□ 0.46
SMG8-203ENST00000578922 OR6X1Q8NH79 312 aa17.96■□□□□ 0.46
SMG8-203ENST00000578922 ZNF671Q8TAW3 534 aa17.96■□□□□ 0.46
SMG8-203ENST00000578922 ADGRG7Q96K78 797 aa17.96■□□□□ 0.46
SMG8-203ENST00000578922 PLEKHA1Q9HB21 404 aa17.96■□□□□ 0.46
SMG8-203ENST00000578922 SLCO1C1Q9NYB5 712 aa17.96■□□□□ 0.46
SMG8-203ENST00000578922 MRPS7Q9Y2R9 242 aaKnown RBP17.96■□□□□ 0.46
SMG8-203ENST00000578922 TNFSF10P50591 281 aa17.95■□□□□ 0.46
SMG8-203ENST00000578922 LINC00346Q8IVM7 164 aa17.95■□□□□ 0.46
SMG8-203ENST00000578922 SLC23A1Q9UHI7 598 aa17.95■□□□□ 0.46
SMG8-203ENST00000578922 MGAT4AQ9UM21 535 aa17.95■□□□□ 0.46
SMG8-203ENST00000578922 LOC102725191A0A1B0GVB3 256 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 A0A1W2PPL8 197 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 DLL1O00548 723 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 GLSO94925 669 aaPredicted RBP17.94■□□□□ 0.46
SMG8-203ENST00000578922 BLVRAP53004 296 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 P2RX3P56373 397 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 PMP22Q01453 160 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 SLC17A1Q14916 467 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 FAM220AQ7Z4H9 259 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 FAM109AQ8N4B1 249 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 SLC26A10Q8NG04 563 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 OR14A2Q96R54 314 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 SMAD5Q99717 465 aaKnown RBP17.94■□□□□ 0.46
SMG8-203ENST00000578922 PDCD1LG2Q9BQ51 273 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 SCNM1Q9BWG6 230 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 ELF5Q9UKW6 265 aaPredicted RBP17.94■□□□□ 0.46
SMG8-203ENST00000578922 KCNMB2Q9Y691 235 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 PRRC2CQ9Y520 2896 aaKnown RBP17.94■□□□□ 0.46
SMG8-203ENST00000578922 A0A087WV48 116 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 DNAJC13O75165 2243 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 ECDO95905 644 aaPredicted RBP17.94■□□□□ 0.46
SMG8-203ENST00000578922 WNT11O96014 354 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 SULT1A3P0DMM9 295 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 SULT1A4P0DMN0 295 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 ZNF823P16415 610 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 SRMP19623 302 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 CDAP32320 146 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 PTGS2P35354 604 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 PER3P56645 1201 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 EIF2B1Q14232 305 aaKnown RBP17.94■□□□□ 0.46
SMG8-203ENST00000578922 THEM4Q5T1C6 240 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 LIPNQ5VXI9 398 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 LRRN1Q6UXK5 716 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 RADILQ96JH8 1075 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 CEP295Q9C0D2 2601 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 DEFB127Q9H1M4 99 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 SEC61A2Q9H9S3 476 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 KIAA1549Q9HCM3 1950 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 CLEC4AQ9UMR7 237 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 AK6Q9Y3D8 172 aaKnown RBP17.94■□□□□ 0.46
SMG8-203ENST00000578922 TMEM14AQ9Y6G1 99 aa17.94■□□□□ 0.46
SMG8-203ENST00000578922 MEIKINA0A087WXM9 373 aa17.93■□□□□ 0.46
SMG8-203ENST00000578922 A0A1B0GTH9 108 aa17.93■□□□□ 0.46
SMG8-203ENST00000578922 A0A1W2PPK0 400 aa17.93■□□□□ 0.46
SMG8-203ENST00000578922 NAP1L6A6NFF2 107 aa17.93■□□□□ 0.46
SMG8-203ENST00000578922 TLX3O43711 291 aaPredicted RBP17.93■□□□□ 0.46
SMG8-203ENST00000578922 VAMP5O95183 116 aa17.93■□□□□ 0.46
SMG8-203ENST00000578922 TPOP07202 933 aa17.93■□□□□ 0.46
SMG8-203ENST00000578922 QDPRP09417 244 aa17.93■□□□□ 0.46
SMG8-203ENST00000578922 AP3S2P59780 193 aa17.93■□□□□ 0.46
SMG8-203ENST00000578922 NANOS3P60323 173 aaKnown RBP17.93■□□□□ 0.46
SMG8-203ENST00000578922 RNFT1Q5M7Z0 435 aa17.93■□□□□ 0.46
SMG8-203ENST00000578922 CORO6Q6QEF8 472 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms