RNA–Protein interactions for RNA: ENST00000576958.1

PRPF8-215, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-215ENST00000576958 LIPEQ05469 1076 aa10.04□□□□□ -0.8
PRPF8-215ENST00000576958 FOXL1Q12952 345 aa10.04□□□□□ -0.8
PRPF8-215ENST00000576958 TRAM2Q15035 370 aa10.04□□□□□ -0.8
PRPF8-215ENST00000576958 ZBED5Q49AG3 693 aa10.04□□□□□ -0.8
PRPF8-215ENST00000576958 ERICH5Q6P6B1 374 aa10.04□□□□□ -0.8
PRPF8-215ENST00000576958 SHISA2Q6UWI4 295 aa10.04□□□□□ -0.8
PRPF8-215ENST00000576958 TREML4Q6UXN2 200 aa10.04□□□□□ -0.8
PRPF8-215ENST00000576958 RBMS3Q6XE24 437 aaKnown RBP10.04□□□□□ -0.8
PRPF8-215ENST00000576958 MBOAT2Q6ZWT7 520 aa10.04□□□□□ -0.8
PRPF8-215ENST00000576958 LINC00346Q8IVM7 164 aa10.04□□□□□ -0.8
PRPF8-215ENST00000576958 FGFRL1Q8N441 504 aa10.04□□□□□ -0.8
PRPF8-215ENST00000576958 OR1F12Q8NHA8 337 aa10.04□□□□□ -0.8
PRPF8-215ENST00000576958 SLC7A13Q8TCU3 470 aa10.04□□□□□ -0.8
PRPF8-215ENST00000576958 ACOT11Q8WXI4 607 aaPredicted RBP10.04□□□□□ -0.8
PRPF8-215ENST00000576958 SSBP3Q9BWW4 388 aaPredicted RBP10.04□□□□□ -0.8
PRPF8-215ENST00000576958 MS4A7Q9GZW8 240 aaPredicted RBP10.04□□□□□ -0.8
PRPF8-215ENST00000576958 ZNF696Q9H7X3 374 aa10.04□□□□□ -0.8
PRPF8-215ENST00000576958 MARCH7Q9H992 704 aa10.04□□□□□ -0.8
PRPF8-215ENST00000576958 PDP1Q9P0J1 537 aaPredicted RBP10.04□□□□□ -0.8
PRPF8-215ENST00000576958 STX18Q9P2W9 335 aaKnown RBP10.04□□□□□ -0.8
PRPF8-215ENST00000576958 GRHPRQ9UBQ7 328 aa10.04□□□□□ -0.8
PRPF8-215ENST00000576958 CTSZQ9UBR2 303 aa10.04□□□□□ -0.8
PRPF8-215ENST00000576958 IL19Q9UHD0 177 aa10.04□□□□□ -0.8
PRPF8-215ENST00000576958 SIGLEC7Q9Y286 467 aa10.04□□□□□ -0.8
PRPF8-215ENST00000576958 IER3IP1Q9Y5U9 82 aa10.04□□□□□ -0.8
PRPF8-215ENST00000576958 WNK1Q9H4A3 2382 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 IGHV2-70DA0A0C4DH43 119 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 TRBV4-1A0A0J9YWV2 114 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 HMGB1P1B2RPK0 211 aaPredicted RBP10.03□□□□□ -0.8
PRPF8-215ENST00000576958 H3BSA7 217 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 CXCR6O00574 342 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 PPP1R3DO95685 299 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 PLATP00750 562 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 IFNW1P05000 195 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 SFTPBP07988 381 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 COX5BP10606 129 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 LIPAP38571 399 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 MDH2P40926 338 aaKnown RBP10.03□□□□□ -0.8
PRPF8-215ENST00000576958 RPS27P42677 84 aaKnown RBP10.03□□□□□ -0.8
PRPF8-215ENST00000576958 CENPAP49450 140 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 GUCY1A3Q02108 690 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 SCRN3Q0VDG4 424 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 MAB21L1Q13394 359 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 MPPED2Q15777 294 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 ESCO2Q56NI9 601 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 METTL21CQ5VZV1 264 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 HIST2H2BDQ6DRA6 164 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 CFAP77Q6ZQR2 320 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 CBLL1Q75N03 491 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 SPATC1Q76KD6 591 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 TEX29Q8N6K0 151 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 KIR3DL3Q8N743 410 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 NPEPL1Q8NDH3 523 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 OR8G5Q8NG78 346 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 SH3GL1Q99961 368 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 MRI1Q9BV20 369 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 RASSF4Q9H2L5 321 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 UFSP2Q9NUQ7 469 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 CGGBP1Q9UFW8 167 aaPredicted RBP10.03□□□□□ -0.8
PRPF8-215ENST00000576958 OR5V1Q9UGF6 321 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 DOCK11Q5JSL3 2073 aa10.03□□□□□ -0.8
PRPF8-215ENST00000576958 A0A1B0GW55 424 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 DUX4L2P0CJ85 424 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 DUX4L3P0CJ86 424 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 DUX4L4P0CJ87 422 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 DUX4L5P0CJ88 424 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 DUX4L6P0CJ89 424 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 DUX4L7P0CJ90 424 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 TNFRSF1AP19438 455 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 OMPP47874 163 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 GSK3BP49841 420 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 SLC7A2P52569 658 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 FGF12P61328 243 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 AQP6Q13520 282 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 MIDNQ504T8 468 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 IFI44LQ53G44 452 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 PDLIM3Q53GG5 364 aaPredicted RBP10.02□□□□□ -0.81
PRPF8-215ENST00000576958 ZMAT1Q5H9K5 638 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 COQ5Q5HYK3 327 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 FAM205BPQ63HN1 556 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 SLC27A4Q6P1M0 643 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 DUX4L9Q6RFH8 374 aaPredicted RBP10.02□□□□□ -0.81
PRPF8-215ENST00000576958 LYPD4Q6UWN0 246 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 FBXW12Q6X9E4 464 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 ZNF841Q6ZN19 808 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 TMPRSS11FQ6ZWK6 438 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 SYT9Q86SS6 491 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 TREML1Q86YW5 311 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 GLB1L2Q8IW92 636 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 OR10S1Q8NGN2 331 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 OR52J3Q8NH60 311 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 ZNRF4Q8WWF5 429 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 PTP4A1Q93096 173 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 TMIGD2Q96BF3 282 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 UPRTQ96BW1 309 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 NMNAT1Q9HAN9 279 aaPredicted RBP10.02□□□□□ -0.81
PRPF8-215ENST00000576958 NRIP3Q9NQ35 241 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 VSX1Q9NZR4 365 aaPredicted RBP10.02□□□□□ -0.81
PRPF8-215ENST00000576958 DUX4Q9UBX2 424 aa10.02□□□□□ -0.81
PRPF8-215ENST00000576958 RPS6KA6Q9UK32 745 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms