RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 WDPCPO95876 746 aa12.45□□□□□ -0.42
VPS33B-208ENST00000574755 GSTT2BP0CG30 244 aa12.45□□□□□ -0.42
VPS33B-208ENST00000574755 SRD5A2P31213 254 aa12.45□□□□□ -0.42
VPS33B-208ENST00000574755 GUCA1AP43080 201 aaPredicted RBP12.45□□□□□ -0.42
VPS33B-208ENST00000574755 CSNK1A1P48729 337 aa12.45□□□□□ -0.42
VPS33B-208ENST00000574755 CYB561P49447 251 aa12.45□□□□□ -0.42
VPS33B-208ENST00000574755 PSMA6P60900 246 aaKnown RBP12.45□□□□□ -0.42
VPS33B-208ENST00000574755 SFRP4Q6FHJ7 346 aaPredicted RBP12.45□□□□□ -0.42
VPS33B-208ENST00000574755 NCCRP1Q6ZVX7 275 aaPredicted RBP12.45□□□□□ -0.42
VPS33B-208ENST00000574755 YRDCQ86U90 279 aaKnown RBP12.45□□□□□ -0.42
VPS33B-208ENST00000574755 NOXA1Q86UR1 476 aa12.45□□□□□ -0.42
VPS33B-208ENST00000574755 TCTE3Q8IZS6 198 aa12.45□□□□□ -0.42
VPS33B-208ENST00000574755 BEST3Q8N1M1 668 aa12.45□□□□□ -0.42
VPS33B-208ENST00000574755 FGGYQ96C11 551 aa12.45□□□□□ -0.42
VPS33B-208ENST00000574755 SCMH1Q96GD3 660 aa12.45□□□□□ -0.42
VPS33B-208ENST00000574755 ZNF275Q9NSD4 429 aaPredicted RBP12.45□□□□□ -0.42
VPS33B-208ENST00000574755 DOCK10Q96BY6 2186 aa12.45□□□□□ -0.42
VPS33B-208ENST00000574755 TMEM272A0A1B0GTI8 110 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 A0A1W2PNU3 283 aaPredicted RBP12.44□□□□□ -0.42
VPS33B-208ENST00000574755 ANKRD20A5PA0PJZ0 165 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 TPPPO94811 219 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 F10P00742 488 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 DLSTP36957 453 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 GNALP38405 381 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 PRKXP51817 358 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 BTN2A1Q7KYR7 527 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 RHOUQ7L0Q8 258 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 OR9K2Q8NGE7 335 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 OR6M1Q8NGM8 313 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 SLC25A28Q96A46 364 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 ATG5Q9H1Y0 275 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 TP63Q9H3D4 680 aaPredicted RBP12.44□□□□□ -0.42
VPS33B-208ENST00000574755 MRPS18BQ9Y676 258 aaKnown RBP12.44□□□□□ -0.42
VPS33B-208ENST00000574755 C7orf66A4D0T2 115 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 NAP1L6A6NFF2 107 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 KDM4BO94953 1096 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 YES1P07947 543 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 H2AFB2P0C5Z0 115 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 ENPP1P22413 925 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 POU4F3Q15319 338 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 KCNMB1Q16558 191 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 SGCAQ16586 387 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 TMEM255AQ5JRV8 349 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 CDCP2Q5VXM1 449 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 NKAIN3Q8N8D7 197 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 SLC39A7Q92504 469 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 THOC3Q96J01 351 aaKnown RBP12.44□□□□□ -0.42
VPS33B-208ENST00000574755 OR2M2Q96R28 347 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 C20orf85Q9H1P6 137 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 MED28Q9H204 178 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 NIPAL2Q9H841 368 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 MOB1AQ9H8S9 216 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 NKIRAS2Q9NYR9 191 aa12.44□□□□□ -0.42
VPS33B-208ENST00000574755 CCDC187A0A096LP49 1063 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 MT-CO3P00414 261 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 SLC2A1P11166 492 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 BIVMQ86UB2 503 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 COMMD2Q86X83 199 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 OR56B4Q8NH76 319 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 OR51E1Q8TCB6 317 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 DACT3Q96B18 629 aaPredicted RBP12.43□□□□□ -0.42
VPS33B-208ENST00000574755 EDEM2Q9BV94 578 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 SRXN1Q9BYN0 137 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 ACTR6Q9GZN1 396 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 GHITMQ9H3K2 345 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 SLC17A5Q9NRA2 495 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 PAQR5Q9NXK6 330 aaPredicted RBP12.43□□□□□ -0.42
VPS33B-208ENST00000574755 STMN3Q9NZ72 180 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 AHCTF1Q8WYP5 2266 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 TRAV18A0A075B6X5 111 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 A0A1B0GVI7 797 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 TRAPPC6AO75865 159 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 RBBP9O75884 186 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 RFPL3SP0C7P2 107 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 RAG2P55895 527 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 B3GALT5-AS1P59052 145 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 MAB21L1Q13394 359 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 PHYHD1Q5SRE7 291 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 FAAP20Q6NZ36 180 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 DHRS13Q6UX07 377 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 GIMAP1Q8WWP7 306 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 PSMF1Q92530 271 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 RNF170Q96K19 258 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 GAL3ST1Q99999 423 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 ZNF416Q9BWM5 594 aa12.43□□□□□ -0.42
VPS33B-208ENST00000574755 PNRC2Q9NPJ4 139 aaKnown RBP12.43□□□□□ -0.42
VPS33B-208ENST00000574755 CIB4A0PJX0 185 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 LRRC3CA6NJW4 275 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 PSMB1P20618 241 aaKnown RBP12.42□□□□□ -0.42
VPS33B-208ENST00000574755 MSR1P21757 451 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 STOMP27105 288 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 SELENOPP49908 381 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 ZNF121P58317 390 aaPredicted RBP12.42□□□□□ -0.42
VPS33B-208ENST00000574755 GALK2Q01415 458 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 IFITM2Q01629 132 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 EIF3IQ13347 325 aaKnown RBP12.42□□□□□ -0.42
VPS33B-208ENST00000574755 SF3B4Q15427 424 aaKnown RBP eCLIP12.42□□□□□ -0.421e-6■■■■□ 21.3
VPS33B-208ENST00000574755 GSG1Q2KHT4 349 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 PCGF3Q3KNV8 242 aa12.42□□□□□ -0.42
VPS33B-208ENST00000574755 DNM1P46Q6ZS02 220 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms