RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 FAM166AQ6J272 317 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 ZNF774Q6NX45 483 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 TMEM154Q6P9G4 183 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 PGM2L1Q6PCE3 622 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 SMARCD3Q6STE5 483 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 ARL9Q6T311 187 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 UGT2A3Q6UWM9 527 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 DPY19L2P2Q6ZN68 376 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 ZER1Q7Z7L7 766 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 C1orf174Q8IYL3 243 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 FITM2Q8N6M3 262 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 SNX33Q8WV41 574 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 RASD2Q96D21 266 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 MSI2Q96DH6 328 aaKnown RBP6.35□□□□□ -1.39
NUP88-205ENST00000572809 RSRC1Q96IZ7 334 aaKnown RBP6.35□□□□□ -1.39
NUP88-205ENST00000572809 C4orf45Q96LM5 186 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 GPA33Q99795 319 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 FUZQ9BT04 418 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 ZNF416Q9BWM5 594 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 BEX2Q9BXY8 128 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 RERGLQ9H628 205 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 CHODLQ9H9P2 273 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 ELOVL3Q9HB03 270 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 IL1RAPQ9NPH3 570 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 HINT3Q9NQE9 182 aaKnown RBP6.35□□□□□ -1.39
NUP88-205ENST00000572809 POLE4Q9NR33 117 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 FAM53CQ9NYF3 392 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 ASH2LQ9UBL3 628 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 IL20RAQ9UHF4 553 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 CDC42EP3Q9UKI2 254 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 TMCC3Q9ULS5 477 aa6.35□□□□□ -1.39
NUP88-205ENST00000572809 CHD3Q12873 2000 aaKnown RBP6.34□□□□□ -1.39
NUP88-205ENST00000572809 TEX13CA0A0J9YWL9 993 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 DYNC1I1O14576 645 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 IMPA2O14732 288 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 TXNDC12O95881 172 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 FAM107AO95990 144 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 NGFP01138 241 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 MT-ND5P03915 603 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 COX5BP10606 129 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 CTLA4P16410 223 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 ACHEP22303 614 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 RRM2P31350 389 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 WNT5AP41221 380 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 CDKN2AP42771 156 aaKnown RBP6.34□□□□□ -1.39
NUP88-205ENST00000572809 MAGEB1P43366 347 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 GPR6P46095 362 aaPredicted RBP6.34□□□□□ -1.39
NUP88-205ENST00000572809 ARHGDIAP52565 204 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 HMGA2P52926 109 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 FXYD6P3P58550 94 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 LSM6P62312 80 aaKnown RBP6.34□□□□□ -1.39
NUP88-205ENST00000572809 MRPS11P82912 194 aaKnown RBP6.34□□□□□ -1.39
NUP88-205ENST00000572809 SCRN3Q0VDG4 424 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 KRR1Q13601 381 aaKnown RBP6.34□□□□□ -1.39
NUP88-205ENST00000572809 TRIP10Q15642 601 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 PCGF3Q3KNV8 242 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 C1orf94Q6P1W5 598 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 ZDHHC21Q8IVQ6 265 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 GLB1L2Q8IW92 636 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 ZNF101Q8IZC7 436 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 ARHGAP24Q8N264 748 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 CCDC197Q8NCU1 140 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 ABHD4Q8TB40 342 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 SLC25A40Q8TBP6 338 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 KLF14Q8TD94 323 aaPredicted RBP6.34□□□□□ -1.39
NUP88-205ENST00000572809 GNPDA2Q8TDQ7 276 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 YIPF5Q969M3 257 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 MARS2Q96GW9 593 aaKnown RBP6.34□□□□□ -1.39
NUP88-205ENST00000572809 ERMAPQ96PL5 475 aaPredicted RBP6.34□□□□□ -1.39
NUP88-205ENST00000572809 SNX18Q96RF0 628 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 GPX7Q96SL4 187 aaPredicted RBP6.34□□□□□ -1.39
NUP88-205ENST00000572809 OR2J1Q9GZK6 312 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 NUAK2Q9H093 628 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 SHARPINQ9H0F6 387 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 SYT4Q9H2B2 425 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 DECR2Q9NUI1 292 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 C14orf119Q9NWQ9 140 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 NKIRAS2Q9NYR9 191 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 VSX1Q9NZR4 365 aaPredicted RBP6.34□□□□□ -1.39
NUP88-205ENST00000572809 ACTR3BQ9P1U1 418 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 LPAR3Q9UBY5 353 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 NDRG4Q9ULP0 352 aaKnown RBP6.34□□□□□ -1.39
NUP88-205ENST00000572809 KCNS2Q9ULS6 477 aa6.34□□□□□ -1.39
NUP88-205ENST00000572809 JMJD1CQ15652 2540 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 RTTNQ86VV8 2226 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 PLSCR5A0PG75 271 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 ARPC3O15145 178 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 TPD52L2O43399 206 aaKnown RBP6.33□□□□□ -1.4
NUP88-205ENST00000572809 PPIHO43447 177 aaKnown RBP6.33□□□□□ -1.4
NUP88-205ENST00000572809 SGCEO43556 437 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 CDC14BO60729 498 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 KRT36O76013 467 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 MPZL1O95297 269 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 PPP1R3DO95685 299 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 TSPAN15O95858 294 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 FAM157CP0CG43 387 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 CALB2P22676 271 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 TUBG1P23258 451 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 FPR3P25089 353 aa6.33□□□□□ -1.4
NUP88-205ENST00000572809 CRABP1P29762 137 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms