RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 FZD1Q9UP38 647 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 GOLT1BQ9Y3E0 138 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 OR2W1Q9Y3N9 320 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 HS3ST3B1Q9Y662 390 aa4.25□□□□□ -1.73
TOPBP1-210ENST00000572787 NEDD4P46934 1319 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 IGHV4-28A0A0C4DH34 117 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 A0A1W2PQ67 120 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 OR11H12B2RN74 326 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 C11orf98E9PRG8 122 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 SLC31A2O15432 143 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 ZG16O60844 167 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 UGT2B11O75310 529 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 TSPAN15O95858 294 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 IGHV2-5P01817 119 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 CT45A6P0DMU7 189 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 CT45A5P0DMU8 189 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 CT45A7P0DMV0 189 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 PRKACGP22612 351 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 F2RP25116 425 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 HTR1EP28566 365 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 ADORA1P30542 326 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 SHMT2P34897 504 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 ARL2P36404 184 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 RPL5P46777 297 aaKnown RBP4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 GSSP48637 474 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 SULT1A1P50225 295 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 SULT1A2P50226 295 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 PEX3P56589 373 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 RAB25P57735 213 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 RBX1P62877 108 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 PSPHP78330 225 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 TGFBR3Q03167 851 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 ZNF85Q03923 595 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 LTBQ06643 244 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 ZBED5Q49AG3 693 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 CT45A1Q5HYN5 189 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 CST9Q5W186 159 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 C9orf139Q6ZV77 190 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 PRSS48Q7RTY5 328 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 FAM19A5Q7Z5A7 132 aaPredicted RBP4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 THOC6Q86W42 341 aaKnown RBP4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 CCDC71Q8IV32 467 aaPredicted RBP4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 CPNE9Q8IYJ1 553 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 BLIDQ8IZY5 108 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 STX19Q8N4C7 294 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 TMEM199Q8N511 208 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 ZNF561Q8N587 486 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 UBL4BQ8N7F7 174 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 OR8G5Q8NG78 346 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 OR11H1Q8NG94 326 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 OR1K1Q8NGR3 316 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 OR2G2Q8NGZ5 317 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 OR11H2Q8NH07 326 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 OR8U1Q8NH10 309 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 CT45A3Q8NHU0 189 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 CRYGNQ8WXF5 182 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 ZHX1-C8orf76Q96EF9 292 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 DNAJA3Q96EY1 480 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 IMP4Q96G21 291 aaKnown RBP4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 ADGRG7Q96K78 797 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 ZNF597Q96LX8 424 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 TMEM56Q96MV1 263 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 ZNF599Q96NL3 588 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 OLFM3Q96PB7 478 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 ZIM3Q96PE6 472 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 NODALQ96S42 347 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 TBX15Q96SF7 602 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 VAT1Q99536 393 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 KCTD14Q9BQ13 255 aaPredicted RBP4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 TMED9Q9BVK6 235 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 YTHDF1Q9BYJ9 559 aaKnown RBP4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 PPDPFQ9H3Y8 114 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 ELL3Q9HB65 397 aaPredicted RBP4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 Q9UF83 564 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 KCNS2Q9ULS6 477 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 SNX10Q9Y5X0 201 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 SELENOKQ9Y6D0 94 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 NID2Q14112 1375 aa4.24□□□□□ -1.73
TOPBP1-210ENST00000572787 MYH14Q7Z406 1995 aaKnown RBP4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 PCDH11XQ9BZA7 1347 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 ARID2Q68CP9 1835 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 A0A1B0GTL3 188 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 ZNF98A6NK75 572 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 FAM166BA8MTA8 275 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 ANKRD63C9JTQ0 380 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 NEDD8-MDP1E9PL57 170 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 SLC22A5O76082 557 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 SEC24AO95486 1093 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 CD8AP01732 235 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 CD74P04233 296 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 OR5AL1P0C617 328 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 RNF224P0DH78 156 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 ICAM2P13598 275 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 RAB5AP20339 215 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 C4BPBP20851 252 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 LMO1P25800 156 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 ZFP36P26651 326 aaKnown RBP4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 ELK4P28324 431 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 CEACAM6P40199 344 aa4.23□□□□□ -1.73
TOPBP1-210ENST00000572787 PMELP40967 661 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms