RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 LCN9Q8WX39 176 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 RPL3LQ92901 407 aaKnown RBP3.01□□□□□ -1.93
CDC27-213ENST00000571643 ART4Q93070 314 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 C10orf35Q96D05 121 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 MTERF3Q96E29 417 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 DUS3LQ96G46 650 aaKnown RBP3.01□□□□□ -1.93
CDC27-213ENST00000571643 ATXN7L3BQ96GX2 97 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 JSRP1Q96MG2 331 aaPredicted RBP3.01□□□□□ -1.93
CDC27-213ENST00000571643 BIRC8Q96P09 236 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 OPALINQ96PE5 141 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 NDNQ99608 321 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 GFI1Q99684 422 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 PSD2Q9BQI7 771 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 PITPNM3Q9BZ71 974 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 C6orf62Q9GZU0 229 aaPredicted RBP3.01□□□□□ -1.93
CDC27-213ENST00000571643 TOLLIPQ9H0E2 274 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 PCBD2Q9H0N5 130 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 SRMSQ9H3Y6 488 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 VIPAS39Q9H9C1 493 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 POPDC3Q9HBV1 291 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 RAB18Q9NP72 206 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 OR2S2Q9NQN1 319 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 HRASLS2Q9NWW9 162 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 NDE1Q9NXR1 346 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 TAS2R13Q9NYV9 303 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 PTTG3PQ9NZH4 202 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 CLN8Q9UBY8 286 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 WARS2Q9UGM6 360 aaKnown RBP3.01□□□□□ -1.93
CDC27-213ENST00000571643 LNPEPQ9UIQ6 1025 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 POMT2Q9UKY4 750 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 PYCARDQ9ULZ3 195 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 ASF1AQ9Y294 204 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 BTRCQ9Y297 605 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 GSTK1Q9Y2Q3 226 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 MRPS28Q9Y2Q9 187 aaKnown RBP3.01□□□□□ -1.93
CDC27-213ENST00000571643 STARD10Q9Y365 291 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 DHRS7Q9Y394 339 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 LRRC42Q9Y546 428 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 PCM1Q15154 2024 aa3.01□□□□□ -1.93
CDC27-213ENST00000571643 NCOR2Q9Y618 2525 aa3□□□□□ -1.93
CDC27-213ENST00000571643 ACACBO00763 2458 aa3□□□□□ -1.93
CDC27-213ENST00000571643 SPTBN2O15020 2390 aa3□□□□□ -1.93
CDC27-213ENST00000571643 KCNE1BA0A087WTH5 132 aa3□□□□□ -1.93
CDC27-213ENST00000571643 LOC105371267A0A1B0GV96 52 aa3□□□□□ -1.93
CDC27-213ENST00000571643 A0A1B0GW15 77 aa3□□□□□ -1.93
CDC27-213ENST00000571643 C21orf140B9A014 251 aa3□□□□□ -1.93
CDC27-213ENST00000571643 H0YJX3 145 aa3□□□□□ -1.93
CDC27-213ENST00000571643 MKRN2OSH3BPM6 223 aa3□□□□□ -1.93
CDC27-213ENST00000571643 DYNC1I1O14576 645 aa3□□□□□ -1.93
CDC27-213ENST00000571643 CLOCKO15516 846 aa3□□□□□ -1.93
CDC27-213ENST00000571643 SYT7O43581 403 aa3□□□□□ -1.93
CDC27-213ENST00000571643 SRPX2O60687 465 aaPredicted RBP3□□□□□ -1.93
CDC27-213ENST00000571643 PSIP1O75475 530 aaKnown RBP3□□□□□ -1.93
CDC27-213ENST00000571643 WISP2O76076 250 aa3□□□□□ -1.93
CDC27-213ENST00000571643 TNFSF15O95150 251 aa3□□□□□ -1.93
CDC27-213ENST00000571643 ETHE1O95571 254 aa3□□□□□ -1.93
CDC27-213ENST00000571643 C8GP07360 202 aa3□□□□□ -1.93
CDC27-213ENST00000571643 KRT16P08779 473 aa3□□□□□ -1.93
CDC27-213ENST00000571643 SMIM10L1P0DMW3 83 aa3□□□□□ -1.93
CDC27-213ENST00000571643 ERGP11308 486 aa3□□□□□ -1.93
CDC27-213ENST00000571643 NCK1P16333 377 aa3□□□□□ -1.93
CDC27-213ENST00000571643 CTRB1P17538 263 aa3□□□□□ -1.93
CDC27-213ENST00000571643 PRPS1L1P21108 318 aa3□□□□□ -1.93
CDC27-213ENST00000571643 PRDX3P30048 256 aaKnown RBP3□□□□□ -1.93
CDC27-213ENST00000571643 CCR7P32248 378 aa3□□□□□ -1.93
CDC27-213ENST00000571643 PHBP35232 272 aa3□□□□□ -1.93
CDC27-213ENST00000571643 OR3A3P47888 321 aa3□□□□□ -1.93
CDC27-213ENST00000571643 PDX1P52945 283 aa3□□□□□ -1.93
CDC27-213ENST00000571643 PLA2G16P53816 162 aa3□□□□□ -1.93
CDC27-213ENST00000571643 AP1S2P56377 157 aa3□□□□□ -1.93
CDC27-213ENST00000571643 RAB4BP61018 213 aa3□□□□□ -1.93
CDC27-213ENST00000571643 ARF6P62330 175 aa3□□□□□ -1.93
CDC27-213ENST00000571643 VSNL1P62760 191 aa3□□□□□ -1.93
CDC27-213ENST00000571643 CDKL1Q00532 357 aa3□□□□□ -1.93
CDC27-213ENST00000571643 CDC20Q12834 499 aa3□□□□□ -1.93
CDC27-213ENST00000571643 TSPAN31Q12999 210 aa3□□□□□ -1.93
CDC27-213ENST00000571643 UBE2V1Q13404 147 aa3□□□□□ -1.93
CDC27-213ENST00000571643 C16orf72Q14CZ0 275 aa3□□□□□ -1.93
CDC27-213ENST00000571643 SPCS2Q15005 226 aa3□□□□□ -1.93
CDC27-213ENST00000571643 TRIP13Q15645 432 aaPredicted RBP3□□□□□ -1.93
CDC27-213ENST00000571643 PPP1R3AQ16821 1122 aa3□□□□□ -1.93
CDC27-213ENST00000571643 AKIRIN2Q53H80 203 aa3□□□□□ -1.93
CDC27-213ENST00000571643 SYT14P1Q58G82 188 aa3□□□□□ -1.93
CDC27-213ENST00000571643 GPR107Q5VW38 600 aa3□□□□□ -1.93
CDC27-213ENST00000571643 ANKRD22Q5VYY1 191 aa3□□□□□ -1.93
CDC27-213ENST00000571643 STUMQ69YW2 141 aa3□□□□□ -1.93
CDC27-213ENST00000571643 CTRB2Q6GPI1 263 aa3□□□□□ -1.93
CDC27-213ENST00000571643 OR52W1Q6IF63 320 aa3□□□□□ -1.93
CDC27-213ENST00000571643 FAM45BPQ6NSW5 357 aa3□□□□□ -1.93
CDC27-213ENST00000571643 NIPAL1Q6NVV3 410 aa3□□□□□ -1.93
CDC27-213ENST00000571643 RTL4Q6ZR62 310 aa3□□□□□ -1.93
CDC27-213ENST00000571643 KCNMB4Q86W47 210 aa3□□□□□ -1.93
CDC27-213ENST00000571643 CRLF3Q8IUI8 442 aa3□□□□□ -1.93
CDC27-213ENST00000571643 ZNF440Q8IYI8 595 aa3□□□□□ -1.93
CDC27-213ENST00000571643 SLC38A6Q8IZM9 456 aa3□□□□□ -1.93
CDC27-213ENST00000571643 ZNF786Q8N393 782 aa3□□□□□ -1.93
CDC27-213ENST00000571643 MARVELD2Q8N4S9 558 aa3□□□□□ -1.93
CDC27-213ENST00000571643 CCNYL1Q8N7R7 359 aa3□□□□□ -1.93
CDC27-213ENST00000571643 Q8N9G6 341 aaPredicted RBP3□□□□□ -1.93
CDC27-213ENST00000571643 C8orf31Q8N9H6 132 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms