RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 MOGAT3Q86VF5 341 aa12.99□□□□□ -0.33
NME3-211ENST00000568561 KLBQ86Z14 1044 aa12.99□□□□□ -0.33
NME3-211ENST00000568561 OR1F12Q8NHA8 337 aa12.99□□□□□ -0.33
NME3-211ENST00000568561 ACOT11Q8WXI4 607 aaPredicted RBP12.99□□□□□ -0.33
NME3-211ENST00000568561 FAM46AQ96IP4 442 aaKnown RBP12.99□□□□□ -0.33
NME3-211ENST00000568561 SYT4Q9H2B2 425 aa12.99□□□□□ -0.33
NME3-211ENST00000568561 WDR76Q9H967 626 aa12.99□□□□□ -0.33
NME3-211ENST00000568561 TMEM165Q9HC07 324 aa12.99□□□□□ -0.33
NME3-211ENST00000568561 IL20RAQ9UHF4 553 aa12.99□□□□□ -0.33
NME3-211ENST00000568561 COA3Q9Y2R0 106 aaPredicted RBP12.99□□□□□ -0.33
NME3-211ENST00000568561 PRKDCP78527 4128 aaKnown RBP12.99□□□□□ -0.33
NME3-211ENST00000568561 IGHV2-70DA0A0C4DH43 119 aa12.98□□□□□ -0.33
NME3-211ENST00000568561 HTR3EA5X5Y0 456 aa12.98□□□□□ -0.33
NME3-211ENST00000568561 F5H5P2 479 aa12.98□□□□□ -0.33
NME3-211ENST00000568561 MLNRO43193 412 aa12.98□□□□□ -0.33
NME3-211ENST00000568561 RAC2P15153 192 aa12.98□□□□□ -0.33
NME3-211ENST00000568561 GNB2P62879 340 aa12.98□□□□□ -0.33
NME3-211ENST00000568561 IL13RA1P78552 427 aa12.98□□□□□ -0.33
NME3-211ENST00000568561 SRSF4Q08170 494 aaKnown RBP12.98□□□□□ -0.33
NME3-211ENST00000568561 ANKDD1AQ495B1 522 aa12.98□□□□□ -0.33
NME3-211ENST00000568561 ZBED5Q49AG3 693 aa12.98□□□□□ -0.33
NME3-211ENST00000568561 MBOAT2Q6ZWT7 520 aa12.98□□□□□ -0.33
NME3-211ENST00000568561 POU5F2Q8N7G0 328 aa12.98□□□□□ -0.33
NME3-211ENST00000568561 C19orf18Q8NEA5 215 aa12.98□□□□□ -0.33
NME3-211ENST00000568561 LZICQ8WZA0 190 aa12.98□□□□□ -0.33
NME3-211ENST00000568561 PTP4A1Q93096 173 aa12.98□□□□□ -0.33
NME3-211ENST00000568561 UPRTQ96BW1 309 aa12.98□□□□□ -0.33
NME3-211ENST00000568561 RCN3Q96D15 328 aa12.98□□□□□ -0.33
NME3-211ENST00000568561 TMEM246Q9BRR3 403 aa12.98□□□□□ -0.33
NME3-211ENST00000568561 SAR1AQ9NR31 198 aa12.98□□□□□ -0.33
NME3-211ENST00000568561 TNFRSF19Q9NS68 423 aa12.98□□□□□ -0.33
NME3-211ENST00000568561 CMTM6Q9NX76 183 aa12.98□□□□□ -0.33
NME3-211ENST00000568561 POLR1DQ9Y2S0 133 aa12.98□□□□□ -0.33
NME3-211ENST00000568561 CLDN34H7C241 214 aa12.97□□□□□ -0.33
NME3-211ENST00000568561 SOCS2O14508 198 aa12.97□□□□□ -0.33
NME3-211ENST00000568561 HOXA3O43365 443 aaPredicted RBP12.97□□□□□ -0.33
NME3-211ENST00000568561 PLATP00750 562 aa12.97□□□□□ -0.33
NME3-211ENST00000568561 NPPAP01160 153 aa12.97□□□□□ -0.33
NME3-211ENST00000568561 HLA-DPB1P04440 258 aa12.97□□□□□ -0.33
NME3-211ENST00000568561 TUBG1P23258 451 aa12.97□□□□□ -0.33
NME3-211ENST00000568561 MTNR1AP48039 350 aa12.97□□□□□ -0.33
NME3-211ENST00000568561 HOXA4Q00056 320 aaPredicted RBP12.97□□□□□ -0.33
NME3-211ENST00000568561 MAPRE2Q15555 327 aa12.97□□□□□ -0.33
NME3-211ENST00000568561 MEP1BQ16820 701 aa12.97□□□□□ -0.33
NME3-211ENST00000568561 PDLIM3Q53GG5 364 aaPredicted RBP12.97□□□□□ -0.33
NME3-211ENST00000568561 CGB2Q6NT52 195 aa12.97□□□□□ -0.33
NME3-211ENST00000568561 SLC27A4Q6P1M0 643 aa12.97□□□□□ -0.33
NME3-211ENST00000568561 BTNL3Q6UXE8 466 aa12.97□□□□□ -0.33
NME3-211ENST00000568561 FBXW12Q6X9E4 464 aa12.97□□□□□ -0.33
NME3-211ENST00000568561 C9orf139Q6ZV77 190 aa12.97□□□□□ -0.33
NME3-211ENST00000568561 PTCHD4Q6ZW05 846 aa12.97□□□□□ -0.33
NME3-211ENST00000568561 GLB1L2Q8IW92 636 aa12.97□□□□□ -0.33
NME3-211ENST00000568561 PCYOX1LQ8NBM8 494 aa12.97□□□□□ -0.33
NME3-211ENST00000568561 OR8G5Q8NG78 346 aa12.97□□□□□ -0.33
NME3-211ENST00000568561 DACT3Q96B18 629 aaPredicted RBP12.97□□□□□ -0.33
NME3-211ENST00000568561 TMIGD2Q96BF3 282 aa12.97□□□□□ -0.33
NME3-211ENST00000568561 HSH2DQ96JZ2 352 aa12.97□□□□□ -0.33
NME3-211ENST00000568561 WACQ9BTA9 647 aa12.97□□□□□ -0.33
NME3-211ENST00000568561 TUBG2Q9NRH3 451 aa12.97□□□□□ -0.33
NME3-211ENST00000568561 GID8Q9NWU2 228 aa12.97□□□□□ -0.33
NME3-211ENST00000568561 CXCR6O00574 342 aa12.96□□□□□ -0.33
NME3-211ENST00000568561 KHDRBS3O75525 346 aaKnown RBP12.96□□□□□ -0.33
NME3-211ENST00000568561 PMELP40967 661 aa12.96□□□□□ -0.33
NME3-211ENST00000568561 PITPNBP48739 271 aa12.96□□□□□ -0.33
NME3-211ENST00000568561 CENPAP49450 140 aa12.96□□□□□ -0.33
NME3-211ENST00000568561 SRP9P49458 86 aaKnown RBP12.96□□□□□ -0.33
NME3-211ENST00000568561 DEFB112Q30KQ8 113 aa12.96□□□□□ -0.33
NME3-211ENST00000568561 MIDNQ504T8 468 aa12.96□□□□□ -0.33
NME3-211ENST00000568561 IFI44LQ53G44 452 aa12.96□□□□□ -0.33
NME3-211ENST00000568561 CORO6Q6QEF8 472 aa12.96□□□□□ -0.33
NME3-211ENST00000568561 LYPD2Q6UXB3 125 aa12.96□□□□□ -0.33
NME3-211ENST00000568561 LRRN1Q6UXK5 716 aa12.96□□□□□ -0.33
NME3-211ENST00000568561 TMPRSS11FQ6ZWK6 438 aa12.96□□□□□ -0.33
NME3-211ENST00000568561 TSEN54Q7Z6J9 526 aaKnown RBP12.96□□□□□ -0.33
NME3-211ENST00000568561 RNF113BQ8IZP6 322 aaKnown RBP12.96□□□□□ -0.33
NME3-211ENST00000568561 FAM156AQ8NDB6 213 aa12.96□□□□□ -0.33
NME3-211ENST00000568561 OR13G1Q8NGZ3 307 aa12.96□□□□□ -0.33
NME3-211ENST00000568561 RAB40AQ8WXH6 277 aa12.96□□□□□ -0.33
NME3-211ENST00000568561 NEIL1Q96FI4 390 aaPredicted RBP12.96□□□□□ -0.33
NME3-211ENST00000568561 COG8Q96MW5 612 aa12.96□□□□□ -0.33
NME3-211ENST00000568561 ZNF582Q96NG8 517 aaPredicted RBP12.96□□□□□ -0.33
NME3-211ENST00000568561 TSSK2Q96PF2 358 aa12.96□□□□□ -0.33
NME3-211ENST00000568561 CDADC1Q9BWV3 514 aa12.96□□□□□ -0.33
NME3-211ENST00000568561 NUAK2Q9H093 628 aa12.96□□□□□ -0.33
NME3-211ENST00000568561 FGFR1OP2Q9NVK5 253 aa12.96□□□□□ -0.33
NME3-211ENST00000568561 ARMCX1Q9P291 453 aa12.96□□□□□ -0.33
NME3-211ENST00000568561 POM121CA8CG34 1229 aa12.95□□□□□ -0.34
NME3-211ENST00000568561 NDUFB2O95178 105 aa12.95□□□□□ -0.34
NME3-211ENST00000568561 SERPINA1P01009 418 aa12.95□□□□□ -0.34
NME3-211ENST00000568561 SDHAP31040 664 aa12.95□□□□□ -0.34
NME3-211ENST00000568561 RGS6P49758 472 aa12.95□□□□□ -0.34
NME3-211ENST00000568561 FGF12P61328 243 aa12.95□□□□□ -0.34
NME3-211ENST00000568561 LSM6P62312 80 aaKnown RBP12.95□□□□□ -0.34
NME3-211ENST00000568561 LIPEQ05469 1076 aa12.95□□□□□ -0.34
NME3-211ENST00000568561 ZNF404Q494X3 552 aa12.95□□□□□ -0.34
NME3-211ENST00000568561 RUSC1-AS1Q66K80 236 aa12.95□□□□□ -0.34
NME3-211ENST00000568561 FKBP9P1Q75LS8 142 aa12.95□□□□□ -0.34
NME3-211ENST00000568561 OR8B3Q8NGG8 313 aa12.95□□□□□ -0.34
NME3-211ENST00000568561 OR10S1Q8NGN2 331 aa12.95□□□□□ -0.34
NME3-211ENST00000568561 SLC7A13Q8TCU3 470 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms