RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 THBS2P35442 1172 aa12.29□□□□□ -0.44
CMTM3-215ENST00000568477 LIPAP38571 399 aa12.29□□□□□ -0.44
CMTM3-215ENST00000568477 CDKN2AP42771 156 aaKnown RBP12.29□□□□□ -0.44
CMTM3-215ENST00000568477 HSPA13P48723 471 aa12.29□□□□□ -0.44
CMTM3-215ENST00000568477 CENPAP49450 140 aa12.29□□□□□ -0.44
CMTM3-215ENST00000568477 DVL1P1P54792 670 aaPredicted RBP12.29□□□□□ -0.44
CMTM3-215ENST00000568477 LRRC36Q1X8D7 754 aa12.29□□□□□ -0.44
CMTM3-215ENST00000568477 RFX4Q33E94 735 aa12.29□□□□□ -0.44
CMTM3-215ENST00000568477 ZMAT1Q5H9K5 638 aa12.29□□□□□ -0.44
CMTM3-215ENST00000568477 OTPQ5XKR4 325 aa12.29□□□□□ -0.44
CMTM3-215ENST00000568477 GLCCI1Q86VQ1 547 aa12.29□□□□□ -0.44
CMTM3-215ENST00000568477 JAZF1Q86VZ6 243 aa12.29□□□□□ -0.44
CMTM3-215ENST00000568477 ZDHHC21Q8IVQ6 265 aa12.29□□□□□ -0.44
CMTM3-215ENST00000568477 PACRGLQ8N7B6 248 aa12.29□□□□□ -0.44
CMTM3-215ENST00000568477 SPATA3Q8NHX4 192 aa12.29□□□□□ -0.44
CMTM3-215ENST00000568477 TMEM158Q8WZ71 300 aa12.29□□□□□ -0.44
CMTM3-215ENST00000568477 EME1Q96AY2 570 aa12.29□□□□□ -0.44
CMTM3-215ENST00000568477 ELMOD3Q96FG2 381 aa12.29□□□□□ -0.44
CMTM3-215ENST00000568477 EGLN1Q9GZT9 426 aa12.29□□□□□ -0.44
CMTM3-215ENST00000568477 OR52D1Q9H346 318 aa12.29□□□□□ -0.44
CMTM3-215ENST00000568477 TUBG2Q9NRH3 451 aa12.29□□□□□ -0.44
CMTM3-215ENST00000568477 TBCCD1Q9NVR7 557 aa12.29□□□□□ -0.44
CMTM3-215ENST00000568477 TREM2Q9NZC2 230 aa12.29□□□□□ -0.44
CMTM3-215ENST00000568477 ASH2LQ9UBL3 628 aa12.29□□□□□ -0.44
CMTM3-215ENST00000568477 TMEFF2Q9UIK5 374 aaPredicted RBP12.29□□□□□ -0.44
CMTM3-215ENST00000568477 GRIP1Q9Y3R0 1128 aa12.29□□□□□ -0.44
CMTM3-215ENST00000568477 ZSCAN5BA6NJL1 495 aa12.28□□□□□ -0.44
CMTM3-215ENST00000568477 CLDN25C9JDP6 229 aa12.28□□□□□ -0.44
CMTM3-215ENST00000568477 WNT9BO14905 357 aa12.28□□□□□ -0.44
CMTM3-215ENST00000568477 ARPC3O15145 178 aa12.28□□□□□ -0.44
CMTM3-215ENST00000568477 TIMM8AO60220 97 aaPredicted RBP12.28□□□□□ -0.44
CMTM3-215ENST00000568477 DEAF1O75398 565 aaPredicted RBP12.28□□□□□ -0.44
CMTM3-215ENST00000568477 MPZL1O95297 269 aa12.28□□□□□ -0.44
CMTM3-215ENST00000568477 RENP00797 406 aa12.28□□□□□ -0.44
CMTM3-215ENST00000568477 GSSP48637 474 aa12.28□□□□□ -0.44
CMTM3-215ENST00000568477 KCNMB1Q16558 191 aa12.28□□□□□ -0.44
CMTM3-215ENST00000568477 HFEQ30201 348 aa12.28□□□□□ -0.44
CMTM3-215ENST00000568477 TMEM255AQ5JRV8 349 aa12.28□□□□□ -0.44
CMTM3-215ENST00000568477 LEG1Q6P5S2 330 aa12.28□□□□□ -0.44
CMTM3-215ENST00000568477 AMIGO2Q86SJ2 522 aa12.28□□□□□ -0.44
CMTM3-215ENST00000568477 OR1F12Q8NHA8 337 aa12.28□□□□□ -0.44
CMTM3-215ENST00000568477 TIMD4Q96H15 378 aa12.28□□□□□ -0.44
CMTM3-215ENST00000568477 COG8Q96MW5 612 aa12.28□□□□□ -0.44
CMTM3-215ENST00000568477 DIRC2Q96SL1 478 aa12.28□□□□□ -0.44
CMTM3-215ENST00000568477 IFT27Q9BW83 186 aa12.28□□□□□ -0.44
CMTM3-215ENST00000568477 ATPIF1Q9UII2 106 aa12.28□□□□□ -0.44
CMTM3-215ENST00000568477 ZDHHC8Q9ULC8 765 aa12.28□□□□□ -0.44
CMTM3-215ENST00000568477 IGLV1-36A0A0B4J1U3 117 aa12.27□□□□□ -0.45
CMTM3-215ENST00000568477 OR6C6A6NF89 314 aa12.27□□□□□ -0.45
CMTM3-215ENST00000568477 FAM157AC9JC47 383 aa12.27□□□□□ -0.45
CMTM3-215ENST00000568477 IDH3BO43837 385 aa12.27□□□□□ -0.45
CMTM3-215ENST00000568477 ADH4P08319 380 aa12.27□□□□□ -0.45
CMTM3-215ENST00000568477 GAAP10253 952 aa12.27□□□□□ -0.45
CMTM3-215ENST00000568477 NOS3P29474 1203 aa12.27□□□□□ -0.45
CMTM3-215ENST00000568477 SRP14P37108 136 aaKnown RBP12.27□□□□□ -0.45
CMTM3-215ENST00000568477 AQP4P55087 323 aa12.27□□□□□ -0.45
CMTM3-215ENST00000568477 LMO4P61968 165 aa12.27□□□□□ -0.45
CMTM3-215ENST00000568477 MVKQ03426 396 aa12.27□□□□□ -0.45
CMTM3-215ENST00000568477 TSPAN31Q12999 210 aa12.27□□□□□ -0.45
CMTM3-215ENST00000568477 AVPI1Q5T686 147 aa12.27□□□□□ -0.45
CMTM3-215ENST00000568477 C1orf94Q6P1W5 598 aa12.27□□□□□ -0.45
CMTM3-215ENST00000568477 ZNF620Q6ZNG0 422 aa12.27□□□□□ -0.45
CMTM3-215ENST00000568477 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.27□□□□□ -0.45
CMTM3-215ENST00000568477 OR4K13Q8NH42 304 aa12.27□□□□□ -0.45
CMTM3-215ENST00000568477 OR51F2Q8NH61 342 aa12.27□□□□□ -0.45
CMTM3-215ENST00000568477 GNPDA2Q8TDQ7 276 aa12.27□□□□□ -0.45
CMTM3-215ENST00000568477 SLC7A6Q92536 515 aa12.27□□□□□ -0.45
CMTM3-215ENST00000568477 RAB1CQ92928 201 aa12.27□□□□□ -0.45
CMTM3-215ENST00000568477 SAMD8Q96LT4 415 aa12.27□□□□□ -0.45
CMTM3-215ENST00000568477 TSSK2Q96PF2 358 aa12.27□□□□□ -0.45
CMTM3-215ENST00000568477 NMNAT3Q96T66 252 aa12.27□□□□□ -0.45
CMTM3-215ENST00000568477 C9orf16Q9BUW7 83 aa12.27□□□□□ -0.45
CMTM3-215ENST00000568477 SEMA6AQ9H2E6 1030 aa12.27□□□□□ -0.45
CMTM3-215ENST00000568477 LPAR2Q9HBW0 351 aa12.27□□□□□ -0.45
CMTM3-215ENST00000568477 MSL2Q9HCI7 577 aa12.27□□□□□ -0.45
CMTM3-215ENST00000568477 CACNG2Q9Y698 323 aa12.27□□□□□ -0.45
CMTM3-215ENST00000568477 J3QW42 95 aa12.26□□□□□ -0.45
CMTM3-215ENST00000568477 DCTN6O00399 190 aa12.26□□□□□ -0.45
CMTM3-215ENST00000568477 RER1O15258 196 aa12.26□□□□□ -0.45
CMTM3-215ENST00000568477 GPANK1O95872 356 aa12.26□□□□□ -0.45
CMTM3-215ENST00000568477 MSMBP08118 114 aa12.26□□□□□ -0.45
CMTM3-215ENST00000568477 CD55P08174 381 aa12.26□□□□□ -0.45
CMTM3-215ENST00000568477 HIST1H1CP16403 213 aaKnown RBP12.26□□□□□ -0.45
CMTM3-215ENST00000568477 RGS6P49758 472 aa12.26□□□□□ -0.45
CMTM3-215ENST00000568477 SLC3A1Q07837 685 aa12.26□□□□□ -0.45
CMTM3-215ENST00000568477 PSG7Q13046 419 aa12.26□□□□□ -0.45
CMTM3-215ENST00000568477 CCDC92Q53HC0 331 aaPredicted RBP12.26□□□□□ -0.45
CMTM3-215ENST00000568477 PGBD2Q6P3X8 592 aa12.26□□□□□ -0.45
CMTM3-215ENST00000568477 ZBTB49Q6ZSB9 765 aa12.26□□□□□ -0.45
CMTM3-215ENST00000568477 LINC00471Q8N535 108 aa12.26□□□□□ -0.45
CMTM3-215ENST00000568477 GJC3Q8NFK1 279 aa12.26□□□□□ -0.45
CMTM3-215ENST00000568477 CCL17Q92583 94 aa12.26□□□□□ -0.45
CMTM3-215ENST00000568477 TMEM186Q96B77 213 aa12.26□□□□□ -0.45
CMTM3-215ENST00000568477 RAB39BQ96DA2 213 aa12.26□□□□□ -0.45
CMTM3-215ENST00000568477 CMBLQ96DG6 245 aa12.26□□□□□ -0.45
CMTM3-215ENST00000568477 DCLRE1CQ96SD1 692 aaKnown RBP12.26□□□□□ -0.45
CMTM3-215ENST00000568477 HDHD2Q9H0R4 259 aa12.26□□□□□ -0.45
CMTM3-215ENST00000568477 POFUT1Q9H488 388 aa12.26□□□□□ -0.45
CMTM3-215ENST00000568477 Q9H521 79 aa12.26□□□□□ -0.45
CMTM3-215ENST00000568477 SRA1Q9HD15 236 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms