RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 CCDC22O60826 627 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 BANF1O75531 89 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 SPAG6O75602 509 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 OR7A10O76100 309 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 IFNA4P05014 189 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 STAG3L2P0CL84 134 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 SMIM6P0DI80 62 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 HSPD1P10809 573 aaKnown RBP2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 NCF1P14598 390 aaPredicted RBP2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 ZNF17P17021 662 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 SERPINA2P20848 420 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 PRPS1L1P21108 318 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 CPN2P22792 545 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 CYP2F1P24903 491 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 CD80P33681 288 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 VHLP40337 213 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 MDH1P40925 334 aaKnown RBP2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 CDKN2CP42773 168 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 SLC1A2P43004 574 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 KIR3DL2P43630 455 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 SRP9P49458 86 aaKnown RBP2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 RGS6P49758 472 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 OR2B6P58173 313 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 MAGOHP61326 146 aaKnown RBP2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 ELF3P78545 371 aaPredicted RBP2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 XIAPP98170 497 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 CDK16Q00536 496 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 DEFA6Q01524 100 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 ZNF33AQ06730 810 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 RAB40BQ12829 278 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 STX4Q12846 297 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 SGCAQ16586 387 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 HNRNPA1L2Q32P51 320 aaKnown RBP2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 TNFAIP8L3Q5GJ75 292 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 EOGTQ5NDL2 527 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 PDZK1Q5T2W1 519 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 HACD4Q5VWC8 232 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 SPOPLQ6IQ16 392 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 ANKRD26P1Q6NSI1 321 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 ZSCAN25Q6NSZ9 544 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 ZFP1Q6P2D0 407 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 FAHD2BQ6P2I3 314 aaPredicted RBP2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 RTL4Q6ZR62 310 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 BHLHA15Q7RTS1 189 aaPredicted RBP2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 DPPA2Q7Z7J5 298 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 CROCCP2Q86T23 111 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 LINC00523Q86TU6 105 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 BIVMQ86UB2 503 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 GID4Q8IVV7 300 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 VSTM4Q8IW00 320 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 CYP4Z2PQ8N1L4 340 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 MTURNQ8N3F0 131 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 NECAB1Q8N987 351 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 TMEM35BQ8NCS4 154 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 SPATA4Q8NEY3 305 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 OR8J2Q8NGG1 315 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 OR2D3Q8NGH3 330 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 NAT14Q8WUY8 206 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 MAFIPQ8WZ33 124 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 MCUR1Q96AQ8 359 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 TAMM41Q96BW9 452 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 RASD2Q96D21 266 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 ECHDC3Q96DC8 303 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 FAHD2AQ96GK7 314 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 WFIKKN1Q96NZ8 548 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 OR5B2Q96R09 309 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 SERPINI1Q99574 410 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 ZNF251Q9BRH9 671 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 PELOQ9BRX2 385 aaKnown RBP2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 PDCD10Q9BUL8 212 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 DUSP16Q9BY84 665 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 SLC19A3Q9BZV2 496 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 RACGAP1Q9H0H5 632 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 ALX4Q9H161 411 aaPredicted RBP2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 GAL3ST2Q9H3Q3 398 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 MEAF6Q9HAF1 191 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 MYOZ1Q9NP98 299 aaPredicted RBP2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 ADAP2Q9NPF8 381 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 NANSQ9NR45 359 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 RGS18Q9NS28 235 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 MRPL22Q9NWU5 206 aaKnown RBP2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 SCML2Q9UQR0 700 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 PRG3Q9Y2Y8 225 aaPredicted RBP2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 OARD1Q9Y530 152 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 FASNP49327 2511 aaKnown RBP2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 TRANK1O15050 2925 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 MYO7AQ13402 2215 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 CHD8Q9HCK8 2581 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 SPTBN2O15020 2390 aa2.49□□□□□ -2.01
HERPUD1-212ENST00000567944 REV3LO60673 3130 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 ACACBO00763 2458 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 GBF1Q92538 1859 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 CEP250Q9BV73 2442 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 A0A0J9YXY3 114 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 PSMB11A5LHX3 300 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 C12orf71A8MTZ7 269 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 LRRN3E7EW58 273 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 NPIPA7E9PJI5 369 aa2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 ZNF701M0R085 212 aaPredicted RBP2.48□□□□□ -2.01
HERPUD1-212ENST00000567944 KCNK1O00180 336 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms