RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 BARX1Q9HBU1 254 aaPredicted RBP11.66□□□□□ -0.54
CLK3-218ENST00000566926 ACOT13Q9NPJ3 140 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 COMMD3-BMI1R4GMX3 469 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 RTTNQ86VV8 2226 aa11.66□□□□□ -0.54
CLK3-218ENST00000566926 ATP6V1G2-DDX39BF2Z307 99 aa11.65□□□□□ -0.54
CLK3-218ENST00000566926 J3QRE1 110 aa11.65□□□□□ -0.54
CLK3-218ENST00000566926 SEC14L2O76054 403 aa11.65□□□□□ -0.54
CLK3-218ENST00000566926 SBK2P0C263 348 aa11.65□□□□□ -0.54
CLK3-218ENST00000566926 OR2T7P0C7T2 308 aa11.65□□□□□ -0.54
CLK3-218ENST00000566926 CECR9P0C854 216 aa11.65□□□□□ -0.54
CLK3-218ENST00000566926 PCMT1P22061 227 aa11.65□□□□□ -0.54
CLK3-218ENST00000566926 GSTT1P30711 240 aa11.65□□□□□ -0.54
CLK3-218ENST00000566926 GUCA1AP43080 201 aaPredicted RBP11.65□□□□□ -0.54
CLK3-218ENST00000566926 IDH3GP51553 393 aaPredicted RBP11.65□□□□□ -0.54
CLK3-218ENST00000566926 SYT6Q5T7P8 510 aaPredicted RBP11.65□□□□□ -0.54
CLK3-218ENST00000566926 XAF1Q6GPH4 301 aa11.65□□□□□ -0.54
CLK3-218ENST00000566926 MDP1Q86V88 176 aa11.65□□□□□ -0.54
CLK3-218ENST00000566926 WDFY1Q8IWB7 410 aa11.65□□□□□ -0.54
CLK3-218ENST00000566926 SLC22A24Q8N4F4 322 aa11.65□□□□□ -0.54
CLK3-218ENST00000566926 SYT14Q8NB59 555 aa11.65□□□□□ -0.54
CLK3-218ENST00000566926 OR51G2Q8NGK0 314 aa11.65□□□□□ -0.54
CLK3-218ENST00000566926 OR9Q1Q8NGQ5 310 aa11.65□□□□□ -0.54
CLK3-218ENST00000566926 OR6K6Q8NGW6 343 aa11.65□□□□□ -0.54
CLK3-218ENST00000566926 OR2T27Q8NH04 317 aa11.65□□□□□ -0.54
CLK3-218ENST00000566926 HAVCR2Q8TDQ0 301 aa11.65□□□□□ -0.54
CLK3-218ENST00000566926 MCHR2Q969V1 340 aa11.65□□□□□ -0.54
CLK3-218ENST00000566926 MUL1Q969V5 352 aa11.65□□□□□ -0.54
CLK3-218ENST00000566926 RHNO1Q9BSD3 238 aa11.65□□□□□ -0.54
CLK3-218ENST00000566926 KCNN2Q9H2S1 579 aa11.65□□□□□ -0.54
CLK3-218ENST00000566926 MED20Q9H944 212 aa11.65□□□□□ -0.54
CLK3-218ENST00000566926 ADGRL4Q9HBW9 690 aa11.65□□□□□ -0.54
CLK3-218ENST00000566926 TMEM38BQ9NVV0 291 aa11.65□□□□□ -0.54
CLK3-218ENST00000566926 B3GNT2Q9NY97 397 aa11.65□□□□□ -0.54
CLK3-218ENST00000566926 FBXO9Q9UK97 447 aaPredicted RBP11.65□□□□□ -0.54
CLK3-218ENST00000566926 TMEM14AQ9Y6G1 99 aa11.65□□□□□ -0.54
CLK3-218ENST00000566926 PMF1-BGLAPU3KQ54 211 aa11.65□□□□□ -0.54
CLK3-218ENST00000566926 CHD3Q12873 2000 aaKnown RBP11.64□□□□□ -0.55
CLK3-218ENST00000566926 A6NHS1 94 aa11.64□□□□□ -0.55
CLK3-218ENST00000566926 PHYHO14832 338 aa11.64□□□□□ -0.55
CLK3-218ENST00000566926 KHDRBS3O75525 346 aaKnown RBP11.64□□□□□ -0.55
CLK3-218ENST00000566926 PTHP01270 115 aa11.64□□□□□ -0.55
CLK3-218ENST00000566926 CD8AP01732 235 aa11.64□□□□□ -0.55
CLK3-218ENST00000566926 HLA-HP01893 362 aa11.64□□□□□ -0.55
CLK3-218ENST00000566926 NPR2P20594 1047 aa11.64□□□□□ -0.55
CLK3-218ENST00000566926 ZNF133P52736 654 aaPredicted RBP11.64□□□□□ -0.55
CLK3-218ENST00000566926 ACTA2P62736 377 aa11.64□□□□□ -0.55
CLK3-218ENST00000566926 RAB1AP62820 205 aa11.64□□□□□ -0.55
CLK3-218ENST00000566926 ACTG2P63267 376 aa11.64□□□□□ -0.55
CLK3-218ENST00000566926 NEDD8Q15843 81 aa11.64□□□□□ -0.55
CLK3-218ENST00000566926 SLC36A2Q495M3 483 aa11.64□□□□□ -0.55
CLK3-218ENST00000566926 C10orf128Q5T292 105 aa11.64□□□□□ -0.55
CLK3-218ENST00000566926 LINC01590Q5TEZ4 76 aa11.64□□□□□ -0.55
CLK3-218ENST00000566926 TMEM53Q6P2H8 277 aa11.64□□□□□ -0.55
CLK3-218ENST00000566926 B3GLCTQ6Y288 498 aa11.64□□□□□ -0.55
CLK3-218ENST00000566926 TMPRSS11AQ6ZMR5 421 aa11.64□□□□□ -0.55
CLK3-218ENST00000566926 KRTAP1-3Q8IUG1 177 aa11.64□□□□□ -0.55
CLK3-218ENST00000566926 OR6V1Q8N148 313 aa11.64□□□□□ -0.55
CLK3-218ENST00000566926 NUP37Q8NFH4 326 aa11.64□□□□□ -0.55
CLK3-218ENST00000566926 OR52N1Q8NH53 320 aa11.64□□□□□ -0.55
CLK3-218ENST00000566926 SGCDQ92629 289 aa11.64□□□□□ -0.55
CLK3-218ENST00000566926 Q96MF0 132 aa11.64□□□□□ -0.55
CLK3-218ENST00000566926 NUAK2Q9H093 628 aa11.64□□□□□ -0.55
CLK3-218ENST00000566926 MARCH7Q9H992 704 aa11.64□□□□□ -0.55
CLK3-218ENST00000566926 KCNG2Q9UJ96 466 aa11.64□□□□□ -0.55
CLK3-218ENST00000566926 B9D1Q9UPM9 204 aa11.64□□□□□ -0.55
CLK3-218ENST00000566926 SPEF1Q9Y4P9 236 aa11.64□□□□□ -0.55
CLK3-218ENST00000566926 IGLV1-36A0A0B4J1U3 117 aa11.63□□□□□ -0.55
CLK3-218ENST00000566926 SLC16A7O60669 478 aa11.63□□□□□ -0.55
CLK3-218ENST00000566926 GYPBP06028 91 aa11.63□□□□□ -0.55
CLK3-218ENST00000566926 CLUP10909 449 aa11.63□□□□□ -0.55
CLK3-218ENST00000566926 CDKN1AP38936 164 aa11.63□□□□□ -0.55
CLK3-218ENST00000566926 RUNX1T1Q06455 604 aa11.63□□□□□ -0.55
CLK3-218ENST00000566926 PIGFQ07326 219 aa11.63□□□□□ -0.55
CLK3-218ENST00000566926 RAB35Q15286 201 aa11.63□□□□□ -0.55
CLK3-218ENST00000566926 SPHARQ15513 63 aa11.63□□□□□ -0.55
CLK3-218ENST00000566926 C11orf71Q6IPW1 123 aa11.63□□□□□ -0.55
CLK3-218ENST00000566926 SLC16A14Q7RTX9 510 aa11.63□□□□□ -0.55
CLK3-218ENST00000566926 SLC16A9Q7RTY1 509 aa11.63□□□□□ -0.55
CLK3-218ENST00000566926 GLB1L2Q8IW92 636 aa11.63□□□□□ -0.55
CLK3-218ENST00000566926 KLHL36Q8N4N3 616 aa11.63□□□□□ -0.55
CLK3-218ENST00000566926 NANOGP1Q8N7R0 232 aa11.63□□□□□ -0.55
CLK3-218ENST00000566926 ZNF454Q8N9F8 522 aa11.63□□□□□ -0.55
CLK3-218ENST00000566926 ZMYND19Q96E35 227 aaPredicted RBP11.63□□□□□ -0.55
CLK3-218ENST00000566926 C18orf12Q96KH6 178 aa11.63□□□□□ -0.55
CLK3-218ENST00000566926 COG8Q96MW5 612 aa11.63□□□□□ -0.55
CLK3-218ENST00000566926 CACNG6Q9BXT2 260 aa11.63□□□□□ -0.55
CLK3-218ENST00000566926 YIPF3Q9GZM5 350 aa11.63□□□□□ -0.55
CLK3-218ENST00000566926 C1orf198Q9H425 327 aa11.63□□□□□ -0.55
CLK3-218ENST00000566926 RNF121Q9H920 327 aa11.63□□□□□ -0.55
CLK3-218ENST00000566926 SRA1Q9HD15 236 aaKnown RBP11.63□□□□□ -0.55
CLK3-218ENST00000566926 ISYNA1Q9NPH2 558 aa11.63□□□□□ -0.55
CLK3-218ENST00000566926 CA10Q9NS85 328 aa11.63□□□□□ -0.55
CLK3-218ENST00000566926 ERVK13-1Q9NX77 482 aa11.63□□□□□ -0.55
CLK3-218ENST00000566926 CAB39Q9Y376 341 aaPredicted RBP11.63□□□□□ -0.55
CLK3-218ENST00000566926 IGHV2OR16-5A0A0B4J2B6 119 aa11.62□□□□□ -0.55
CLK3-218ENST00000566926 DAPL1A0PJW8 107 aa11.62□□□□□ -0.55
CLK3-218ENST00000566926 DPPA5A6NC42 116 aa11.62□□□□□ -0.55
CLK3-218ENST00000566926 ZNF503-AS2A6NEH8 195 aa11.62□□□□□ -0.55
CLK3-218ENST00000566926 C12orf71A8MTZ7 269 aa11.62□□□□□ -0.55
CLK3-218ENST00000566926 FAM171A2A8MVW0 826 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms