RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 ZNF362Q5T0B9 420 aaPredicted RBP26.18■■□□□ 1.78
CMTM4-204ENST00000563952 CFAP77Q6ZQR2 320 aa26.18■■□□□ 1.78
CMTM4-204ENST00000563952 TMEM179BQ7Z7N9 219 aa26.18■■□□□ 1.78
CMTM4-204ENST00000563952 PRIMA1Q86XR5 153 aa26.18■■□□□ 1.78
CMTM4-204ENST00000563952 OR51L1Q8NGJ5 315 aa26.18■■□□□ 1.78
CMTM4-204ENST00000563952 OR9Q1Q8NGQ5 310 aa26.18■■□□□ 1.78
CMTM4-204ENST00000563952 DCLRE1CQ96SD1 692 aaKnown RBP26.18■■□□□ 1.78
CMTM4-204ENST00000563952 COQ7Q99807 217 aa26.18■■□□□ 1.78
CMTM4-204ENST00000563952 CADM1Q9BY67 442 aaKnown RBP26.18■■□□□ 1.78
CMTM4-204ENST00000563952 SAP30LQ9HAJ7 183 aa26.18■■□□□ 1.78
CMTM4-204ENST00000563952 MRPL22Q9NWU5 206 aaKnown RBP26.18■■□□□ 1.78
CMTM4-204ENST00000563952 PDP1Q9P0J1 537 aaPredicted RBP26.18■■□□□ 1.78
CMTM4-204ENST00000563952 KLHL21Q9UJP4 597 aa26.18■■□□□ 1.78
CMTM4-204ENST00000563952 GSC2O15499 205 aa26.17■■□□□ 1.78
CMTM4-204ENST00000563952 E2F6O75461 281 aa26.17■■□□□ 1.78
CMTM4-204ENST00000563952 RP2O75695 350 aa26.17■■□□□ 1.78
CMTM4-204ENST00000563952 ZNF823P16415 610 aa26.17■■□□□ 1.78
CMTM4-204ENST00000563952 HOXB6P17509 224 aaKnown RBP26.17■■□□□ 1.78
CMTM4-204ENST00000563952 TUBG1P23258 451 aa26.17■■□□□ 1.78
CMTM4-204ENST00000563952 TMEM33P57088 247 aa26.17■■□□□ 1.78
CMTM4-204ENST00000563952 FAM166AQ6J272 317 aa26.17■■□□□ 1.78
CMTM4-204ENST00000563952 USP51Q70EK9 711 aa26.17■■□□□ 1.78
CMTM4-204ENST00000563952 HIPK1Q86Z02 1210 aa26.17■■□□□ 1.78
CMTM4-204ENST00000563952 TEX47Q8TBZ9 253 aa26.17■■□□□ 1.78
CMTM4-204ENST00000563952 CMBLQ96DG6 245 aa26.17■■□□□ 1.78
CMTM4-204ENST00000563952 COG8Q96MW5 612 aa26.17■■□□□ 1.78
CMTM4-204ENST00000563952 PITX2Q99697 317 aa26.17■■□□□ 1.78
CMTM4-204ENST00000563952 MSL2Q9HCI7 577 aa26.17■■□□□ 1.78
CMTM4-204ENST00000563952 TUBG2Q9NRH3 451 aa26.17■■□□□ 1.78
CMTM4-204ENST00000563952 CGGBP1Q9UFW8 167 aaPredicted RBP26.17■■□□□ 1.78
CMTM4-204ENST00000563952 IGHV1-69-2A0A0G2JMI3 117 aa26.16■■□□□ 1.78
CMTM4-204ENST00000563952 TVP23AA6NH52 213 aa26.16■■□□□ 1.78
CMTM4-204ENST00000563952 H3BN98 237 aa26.16■■□□□ 1.78
CMTM4-204ENST00000563952 FKBP6O75344 327 aa26.16■■□□□ 1.78
CMTM4-204ENST00000563952 GGT2P36268 569 aa26.16■■□□□ 1.78
CMTM4-204ENST00000563952 LIPAP38571 399 aa26.16■■□□□ 1.78
CMTM4-204ENST00000563952 CBX1P83916 185 aa26.16■■□□□ 1.78
CMTM4-204ENST00000563952 CRMP1Q14194 572 aa26.16■■□□□ 1.78
CMTM4-204ENST00000563952 CD300LDQ6UXZ3 194 aa26.16■■□□□ 1.78
CMTM4-204ENST00000563952 ZNRF4Q8WWF5 429 aa26.16■■□□□ 1.78
CMTM4-204ENST00000563952 YY1AP1Q9H869 796 aa26.16■■□□□ 1.78
CMTM4-204ENST00000563952 PTTG3PQ9NZH4 202 aa26.16■■□□□ 1.78
CMTM4-204ENST00000563952 CYB5R1Q9UHQ9 305 aa26.16■■□□□ 1.78
CMTM4-204ENST00000563952 PURGQ9UJV8 347 aaKnown RBP26.16■■□□□ 1.78
CMTM4-204ENST00000563952 KCNS2Q9ULS6 477 aa26.16■■□□□ 1.78
CMTM4-204ENST00000563952 TCRBV3S1A0A5B6 114 aa26.15■■□□□ 1.78
CMTM4-204ENST00000563952 ARRDC5A6NEK1 342 aa26.15■■□□□ 1.78
CMTM4-204ENST00000563952 LMX1BO60663 402 aa26.15■■□□□ 1.78
CMTM4-204ENST00000563952 TGFAP01135 160 aa26.15■■□□□ 1.78
CMTM4-204ENST00000563952 CRYBB2P43320 205 aa26.15■■□□□ 1.78
CMTM4-204ENST00000563952 RGS6P49758 472 aa26.15■■□□□ 1.78
CMTM4-204ENST00000563952 CHRFAM7AQ494W8 412 aa26.15■■□□□ 1.78
CMTM4-204ENST00000563952 ZMAT1Q5H9K5 638 aa26.15■■□□□ 1.78
CMTM4-204ENST00000563952 FAM209AQ5JX71 171 aa26.15■■□□□ 1.78
CMTM4-204ENST00000563952 IQCF1Q8N6M8 205 aa26.15■■□□□ 1.78
CMTM4-204ENST00000563952 HPS1Q92902 700 aa26.15■■□□□ 1.78
CMTM4-204ENST00000563952 RBM4Q9BWF3 364 aaKnown RBP26.15■■□□□ 1.78
CMTM4-204ENST00000563952 ABCA2Q9BZC7 2435 aa26.15■■□□□ 1.78
CMTM4-204ENST00000563952 RIIAD1A6NNX1 92 aa26.14■■□□□ 1.78
CMTM4-204ENST00000563952 IFNGP01579 166 aa26.14■■□□□ 1.78
CMTM4-204ENST00000563952 GYPBP06028 91 aa26.14■■□□□ 1.78
CMTM4-204ENST00000563952 LYPD4Q6UWN0 246 aa26.14■■□□□ 1.78
CMTM4-204ENST00000563952 APOBEC3DQ96AK3 386 aaPredicted RBP26.14■■□□□ 1.78
CMTM4-204ENST00000563952 ATF6BQ99941 703 aa26.14■■□□□ 1.78
CMTM4-204ENST00000563952 EGLN1Q9GZT9 426 aa26.14■■□□□ 1.78
CMTM4-204ENST00000563952 KCNG2Q9UJ96 466 aa26.14■■□□□ 1.78
CMTM4-204ENST00000563952 ZDHHC8Q9ULC8 765 aa26.14■■□□□ 1.78
CMTM4-204ENST00000563952 CACNG2Q9Y698 323 aa26.14■■□□□ 1.78
CMTM4-204ENST00000563952 MALRD1Q5VYJ5 2156 aa26.14■■□□□ 1.77
CMTM4-204ENST00000563952 RPS27P42677 84 aaKnown RBP26.13■■□□□ 1.77
CMTM4-204ENST00000563952 HLXQ14774 488 aaPredicted RBP26.13■■□□□ 1.77
CMTM4-204ENST00000563952 HS3ST5Q8IZT8 346 aa26.13■■□□□ 1.77
CMTM4-204ENST00000563952 OR5L1Q8NGL2 311 aa26.13■■□□□ 1.77
CMTM4-204ENST00000563952 PTP4A1Q93096 173 aa26.13■■□□□ 1.77
CMTM4-204ENST00000563952 HAVCR1Q96D42 359 aa26.13■■□□□ 1.77
CMTM4-204ENST00000563952 ANK3Q12955 4377 aaKnown RBP26.12■■□□□ 1.77
CMTM4-204ENST00000563952 F5H5K5 113 aa26.12■■□□□ 1.77
CMTM4-204ENST00000563952 J3QW42 95 aa26.12■■□□□ 1.77
CMTM4-204ENST00000563952 WNT9BO14905 357 aa26.12■■□□□ 1.77
CMTM4-204ENST00000563952 KITLGP21583 273 aa26.12■■□□□ 1.77
CMTM4-204ENST00000563952 POU1F1P28069 291 aa26.12■■□□□ 1.77
CMTM4-204ENST00000563952 ECH1Q13011 328 aa26.12■■□□□ 1.77
CMTM4-204ENST00000563952 HFEQ30201 348 aa26.12■■□□□ 1.77
CMTM4-204ENST00000563952 AVPI1Q5T686 147 aa26.12■■□□□ 1.77
CMTM4-204ENST00000563952 CLDND2Q8NHS1 167 aa26.12■■□□□ 1.77
CMTM4-204ENST00000563952 SLCO4A1Q96BD0 722 aa26.12■■□□□ 1.77
CMTM4-204ENST00000563952 ELMOD3Q96FG2 381 aa26.12■■□□□ 1.77
CMTM4-204ENST00000563952 MAP6Q96JE9 813 aa26.12■■□□□ 1.77
CMTM4-204ENST00000563952 DIRC2Q96SL1 478 aa26.12■■□□□ 1.77
CMTM4-204ENST00000563952 ZNF556Q9HAH1 456 aa26.12■■□□□ 1.77
CMTM4-204ENST00000563952 PNRC2Q9NPJ4 139 aaKnown RBP26.12■■□□□ 1.77
CMTM4-204ENST00000563952 TMEM160Q9NX00 188 aa26.12■■□□□ 1.77
CMTM4-204ENST00000563952 TREM2Q9NZC2 230 aa26.12■■□□□ 1.77
CMTM4-204ENST00000563952 DNAJB9Q9UBS3 223 aa26.12■■□□□ 1.77
CMTM4-204ENST00000563952 CDC42EP3Q9UKI2 254 aa26.12■■□□□ 1.77
CMTM4-204ENST00000563952 JMJD1CQ15652 2540 aa26.11■■□□□ 1.77
CMTM4-204ENST00000563952 ADH4P08319 380 aa26.11■■□□□ 1.77
CMTM4-204ENST00000563952 CLUP10909 449 aa26.11■■□□□ 1.77
CMTM4-204ENST00000563952 ZNF3P17036 446 aa26.11■■□□□ 1.77
CMTM4-204ENST00000563952 SPI1P17947 270 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms