RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 GPR148Q8TDV2 347 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 HTRA1Q92743 480 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 SPTSSAQ969W0 71 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 FBXO17Q96EF6 278 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 DCLRE1CQ96SD1 692 aaKnown RBP12.54□□□□□ -0.4
COMMD4-205ENST00000562310 KCNJ15Q99712 375 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 C12orf49Q9H741 205 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 FAM206AQ9NX38 181 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 OR52A1Q9UKL2 312 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 FBXL3Q9UKT7 428 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 GTF2A1LQ9UNN4 478 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 TIMM10BQ9Y5J6 103 aa12.54□□□□□ -0.4
COMMD4-205ENST00000562310 TRAV1-2A0A0B4J238 106 aa12.53□□□□□ -0.4
COMMD4-205ENST00000562310 CASKO14936 926 aa12.53□□□□□ -0.4
COMMD4-205ENST00000562310 DOK2O60496 412 aa12.53□□□□□ -0.4
COMMD4-205ENST00000562310 CDRT1O95170 752 aa12.53□□□□□ -0.4
COMMD4-205ENST00000562310 PNPP00491 289 aa12.53□□□□□ -0.4
COMMD4-205ENST00000562310 ISG15P05161 165 aa12.53□□□□□ -0.4
COMMD4-205ENST00000562310 ACHEP22303 614 aa12.53□□□□□ -0.4
COMMD4-205ENST00000562310 RORCP51449 518 aa12.53□□□□□ -0.4
COMMD4-205ENST00000562310 RBPJQ06330 500 aa12.53□□□□□ -0.4
COMMD4-205ENST00000562310 FAPQ12884 760 aa12.53□□□□□ -0.4
COMMD4-205ENST00000562310 ZNF404Q494X3 552 aa12.53□□□□□ -0.4
COMMD4-205ENST00000562310 CCDC92Q53HC0 331 aaPredicted RBP12.53□□□□□ -0.4
COMMD4-205ENST00000562310 TMEM244Q5VVB8 128 aa12.53□□□□□ -0.4
COMMD4-205ENST00000562310 ANKRD16Q6P6B7 361 aa12.53□□□□□ -0.4
COMMD4-205ENST00000562310 CROCCP3Q8IVE0 287 aa12.53□□□□□ -0.4
COMMD4-205ENST00000562310 MCFD2Q8NI22 146 aa12.53□□□□□ -0.4
COMMD4-205ENST00000562310 NANOS1Q8WY41 292 aaKnown RBP12.53□□□□□ -0.4
COMMD4-205ENST00000562310 RGP1Q92546 391 aaPredicted RBP12.53□□□□□ -0.4
COMMD4-205ENST00000562310 SLC25A46Q96AG3 418 aa12.53□□□□□ -0.4
COMMD4-205ENST00000562310 SH3GL3Q99963 347 aa12.53□□□□□ -0.4
COMMD4-205ENST00000562310 SLIRPQ9GZT3 109 aaKnown RBP12.53□□□□□ -0.4
COMMD4-205ENST00000562310 MMP27Q9H306 513 aa12.53□□□□□ -0.4
COMMD4-205ENST00000562310 TP63Q9H3D4 680 aaPredicted RBP12.53□□□□□ -0.4
COMMD4-205ENST00000562310 G6PC2Q9NQR9 355 aa12.53□□□□□ -0.4
COMMD4-205ENST00000562310 PLEK2Q9NYT0 353 aa12.53□□□□□ -0.4
COMMD4-205ENST00000562310 NUFIP1Q9UHK0 495 aaKnown RBP12.53□□□□□ -0.4
COMMD4-205ENST00000562310 PRSS50Q9UI38 385 aa12.53□□□□□ -0.4
COMMD4-205ENST00000562310 FASNP49327 2511 aaKnown RBP12.52□□□□□ -0.4
COMMD4-205ENST00000562310 PRRG2O14669 202 aa12.52□□□□□ -0.41
COMMD4-205ENST00000562310 RAF1P04049 648 aa12.52□□□□□ -0.41
COMMD4-205ENST00000562310 OCM2P0CE71 109 aa12.52□□□□□ -0.41
COMMD4-205ENST00000562310 ZNF32P17041 273 aa12.52□□□□□ -0.41
COMMD4-205ENST00000562310 CFL1P23528 166 aaKnown RBP12.52□□□□□ -0.41
COMMD4-205ENST00000562310 CALRP27797 417 aaKnown RBP12.52□□□□□ -0.41
COMMD4-205ENST00000562310 OTX1P32242 354 aaPredicted RBP12.52□□□□□ -0.41
COMMD4-205ENST00000562310 SDC2P34741 201 aa12.52□□□□□ -0.41
COMMD4-205ENST00000562310 TIMP3P35625 211 aa12.52□□□□□ -0.41
COMMD4-205ENST00000562310 RPS19P39019 145 aaKnown RBP12.52□□□□□ -0.41
COMMD4-205ENST00000562310 CX3CR1P49238 355 aa12.52□□□□□ -0.41
COMMD4-205ENST00000562310 PER3P56645 1201 aa12.52□□□□□ -0.41
COMMD4-205ENST00000562310 TGFBR3Q03167 851 aa12.52□□□□□ -0.41
COMMD4-205ENST00000562310 HSD17B12Q53GQ0 312 aa12.52□□□□□ -0.41
COMMD4-205ENST00000562310 GFRALQ6UXV0 394 aa12.52□□□□□ -0.41
COMMD4-205ENST00000562310 SKA3Q8IX90 412 aa12.52□□□□□ -0.41
COMMD4-205ENST00000562310 ELMOD2Q8IZ81 293 aa12.52□□□□□ -0.41
COMMD4-205ENST00000562310 GCNT2Q8N0V5 402 aa12.52□□□□□ -0.41
COMMD4-205ENST00000562310 ZNF283Q8N7M2 679 aa12.52□□□□□ -0.41
COMMD4-205ENST00000562310 CNEP1R1Q8N9A8 125 aa12.52□□□□□ -0.41
COMMD4-205ENST00000562310 OR13C5Q8NGS8 318 aa12.52□□□□□ -0.41
COMMD4-205ENST00000562310 TSEN15Q8WW01 171 aaKnown RBP12.52□□□□□ -0.41
COMMD4-205ENST00000562310 AP3S1Q92572 193 aa12.52□□□□□ -0.41
COMMD4-205ENST00000562310 DERL3Q96Q80 235 aa12.52□□□□□ -0.41
COMMD4-205ENST00000562310 OR14A2Q96R54 314 aa12.52□□□□□ -0.41
COMMD4-205ENST00000562310 OR2H1Q9GZK4 316 aa12.52□□□□□ -0.41
COMMD4-205ENST00000562310 NXF2Q9GZY0 626 aaKnown RBP12.52□□□□□ -0.41
COMMD4-205ENST00000562310 SLC25A18Q9H1K4 315 aa12.52□□□□□ -0.41
COMMD4-205ENST00000562310 CXorf56Q9H5V9 222 aa12.52□□□□□ -0.41
COMMD4-205ENST00000562310 SP140LQ9H930 580 aa12.52□□□□□ -0.41
COMMD4-205ENST00000562310 SNTG1Q9NSN8 517 aa12.52□□□□□ -0.41
COMMD4-205ENST00000562310 HHLA2Q9UM44 414 aa12.52□□□□□ -0.41
COMMD4-205ENST00000562310 FREM1Q5H8C1 2179 aa12.52□□□□□ -0.41
COMMD4-205ENST00000562310 A0A075B6Q4 140 aa12.51□□□□□ -0.41
COMMD4-205ENST00000562310 LOC107986453A0A1B0GWG9 222 aa12.51□□□□□ -0.41
COMMD4-205ENST00000562310 OR6C6A6NF89 314 aa12.51□□□□□ -0.41
COMMD4-205ENST00000562310 ZNHIT1O43257 154 aa12.51□□□□□ -0.41
COMMD4-205ENST00000562310 SYNGR3O43761 229 aa12.51□□□□□ -0.41
COMMD4-205ENST00000562310 UBL3O95164 117 aa12.51□□□□□ -0.41
COMMD4-205ENST00000562310 IL2RAP01589 272 aa12.51□□□□□ -0.41
COMMD4-205ENST00000562310 CD2P06729 351 aa12.51□□□□□ -0.41
COMMD4-205ENST00000562310 MMP7P09237 267 aaPredicted RBP12.51□□□□□ -0.41
COMMD4-205ENST00000562310 TMIGD3P0DMS9 266 aaPredicted RBP12.51□□□□□ -0.41
COMMD4-205ENST00000562310 ARR3P36575 388 aa12.51□□□□□ -0.41
COMMD4-205ENST00000562310 KIR2DL2P43627 348 aaPredicted RBP12.51□□□□□ -0.41
COMMD4-205ENST00000562310 INSL4Q14641 139 aa12.51□□□□□ -0.41
COMMD4-205ENST00000562310 RTL6Q6ICC9 239 aa12.51□□□□□ -0.41
COMMD4-205ENST00000562310 TMEM53Q6P2H8 277 aa12.51□□□□□ -0.41
COMMD4-205ENST00000562310 Q6ZT83 130 aa12.51□□□□□ -0.41
COMMD4-205ENST00000562310 CCDC36Q8IYA8 594 aa12.51□□□□□ -0.41
COMMD4-205ENST00000562310 C1orf162Q8NEQ5 155 aaPredicted RBP12.51□□□□□ -0.41
COMMD4-205ENST00000562310 OR1K1Q8NGR3 316 aa12.51□□□□□ -0.41
COMMD4-205ENST00000562310 OR1F12Q8NHA8 337 aa12.51□□□□□ -0.41
COMMD4-205ENST00000562310 TBC1D15Q8TC07 691 aa12.51□□□□□ -0.41
COMMD4-205ENST00000562310 SNRNP40Q96DI7 357 aaKnown RBP12.51□□□□□ -0.41
COMMD4-205ENST00000562310 PBOV1Q9GZY1 135 aa12.51□□□□□ -0.41
COMMD4-205ENST00000562310 SLITRK2Q9H156 845 aa12.51□□□□□ -0.41
COMMD4-205ENST00000562310 CRNNQ9UBG3 495 aaPredicted RBP12.51□□□□□ -0.41
COMMD4-205ENST00000562310 PROCRQ9UNN8 238 aa12.51□□□□□ -0.41
COMMD4-205ENST00000562310 SLC22A13Q9Y226 551 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms