RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 CTF1Q16619 201 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 TBRG1Q3YBR2 411 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 HIKESHIQ53FT3 197 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 ZNF474Q6S9Z5 364 aaPredicted RBP10.65□□□□□ -0.7
HERC1-205ENST00000559886 RND1Q92730 232 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 WNT5BQ9H1J7 359 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 OR51E2Q9H255 320 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 GALNT8Q9NY28 637 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 R4GMQ9 66 aa10.65□□□□□ -0.7
HERC1-205ENST00000559886 SMG1Q96Q15 3661 aaKnown RBP10.64□□□□□ -0.71
HERC1-205ENST00000559886 CIB4A0PJX0 185 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 ZNF503-AS2A6NEH8 195 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 OR6C6A6NF89 314 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 DOK2O60496 412 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 RAD51DO75771 328 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 HLA-HP01893 362 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 BMP5P22003 454 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 CRYBB2P43320 205 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 GDI2P50395 445 aaKnown RBP10.64□□□□□ -0.71
HERC1-205ENST00000559886 MMP16P51512 607 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 CCR9P51686 369 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 RPS25P62851 125 aaKnown RBP10.64□□□□□ -0.71
HERC1-205ENST00000559886 SLC3A1Q07837 685 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 ECH1Q13011 328 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 RSPO1Q2MKA7 263 aaPredicted RBP10.64□□□□□ -0.71
HERC1-205ENST00000559886 TIMM50Q3ZCQ8 353 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 ZNF774Q6NX45 483 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 CXorf67Q86X51 503 aaPredicted RBP10.64□□□□□ -0.71
HERC1-205ENST00000559886 PRSS35Q8N3Z0 413 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 GHSRQ92847 366 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 RPL3LQ92901 407 aaKnown RBP10.64□□□□□ -0.71
HERC1-205ENST00000559886 C4orf45Q96LM5 186 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 KCNJ15Q99712 375 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 BCL7BQ9BQE9 202 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 B3GNT2Q9NY97 397 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 TMEM269A0A1B0GVZ9 245 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 OR4C45A6NMZ5 311 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 A8MXE2 369 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 AIREO43918 545 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 UBL3O95164 117 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 HOXB1P14653 301 aaPredicted RBP10.64□□□□□ -0.71
HERC1-205ENST00000559886 NR4A1P22736 598 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 HSD11B1P28845 292 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 OTX1P32242 354 aaPredicted RBP10.64□□□□□ -0.71
HERC1-205ENST00000559886 ARR3P36575 388 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 MFGE8Q08431 387 aaPredicted RBP10.64□□□□□ -0.71
HERC1-205ENST00000559886 MRPL49Q13405 166 aaKnown RBP10.64□□□□□ -0.71
HERC1-205ENST00000559886 ZNF829Q3KNS6 432 aaPredicted RBP10.64□□□□□ -0.71
HERC1-205ENST00000559886 PABPC1L2AQ5JQF8 200 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 SFRP5Q5T4F7 317 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 CD200R1LQ6Q8B3 271 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 MRGPRGQ86SM5 289 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 CATSPERDQ86XM0 798 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 CCDC36Q8IYA8 594 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 IL17RDQ8NFM7 739 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 OR1F12Q8NHA8 337 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 AKR7LQ8NHP1 331 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 TMEM203Q969S6 136 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 TMED9Q9BVK6 235 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 RNF121Q9H920 327 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 FAM206AQ9NX38 181 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 STUB1Q9UNE7 303 aa10.64□□□□□ -0.71
HERC1-205ENST00000559886 H3BMQ9 156 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 DVL2O14641 736 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 GPRIN2O60269 458 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 GPX5O75715 221 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 ZFPL1O95159 310 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 CD79AP11912 226 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 CRYGSP22914 178 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 KIR3DL2P43630 455 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 PSMA6P60900 246 aaKnown RBP10.63□□□□□ -0.71
HERC1-205ENST00000559886 KRTAP27-1Q3LI81 207 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 WDR38Q5JTN6 314 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 ZNF544Q6NX49 715 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 LUZP2Q86TE4 346 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 LIX1LQ8IVB5 337 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 NANOS1Q8WY41 292 aaKnown RBP10.63□□□□□ -0.71
HERC1-205ENST00000559886 C12orf43Q96C57 262 aaKnown RBP10.63□□□□□ -0.71
HERC1-205ENST00000559886 COQ7Q99807 217 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 PDCD1LG2Q9BQ51 273 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 NOX3Q9HBY0 568 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 G6PC2Q9NQR9 355 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 ATPIF1Q9UII2 106 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 LOC110117498-PIK3R3F6TDL0 507 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 CCL21O00585 134 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 NOL3O60936 208 aaKnown RBP10.63□□□□□ -0.71
HERC1-205ENST00000559886 HLA-DPB1P04440 258 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 PRKXP51817 358 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 RAB1AP62820 205 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 TRAM1Q15629 374 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 TSC22D1Q15714 1073 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 TMEM53Q6P2H8 277 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 GDPGP1Q6ZNW5 385 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 ALDH16A1Q8IZ83 802 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 MS4A15Q8N5U1 240 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 CPEB3Q8NE35 698 aaKnown RBP10.63□□□□□ -0.71
HERC1-205ENST00000559886 CHCHD6Q9BRQ6 235 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 JKAMPQ9P055 326 aa10.63□□□□□ -0.71
HERC1-205ENST00000559886 ARPC4-TTLL3A0A0A6YYG9 625 aa10.62□□□□□ -0.71
HERC1-205ENST00000559886 TMEM212A6NML5 194 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms