RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 ATF6BQ99941 703 aa17.9■□□□□ 0.46
SNRPA1-205ENST00000558036 SLC24A3Q9HC58 644 aa17.9■□□□□ 0.46
SNRPA1-205ENST00000558036 CACNA1AO00555 2505 aa17.9■□□□□ 0.46
SNRPA1-205ENST00000558036 P2RY10O00398 339 aa17.9■□□□□ 0.46
SNRPA1-205ENST00000558036 CRYABP02511 175 aaKnown RBP17.9■□□□□ 0.46
SNRPA1-205ENST00000558036 SRMP19623 302 aa17.9■□□□□ 0.46
SNRPA1-205ENST00000558036 CX3CR1P49238 355 aa17.9■□□□□ 0.46
SNRPA1-205ENST00000558036 ZNF121P58317 390 aaPredicted RBP17.9■□□□□ 0.46
SNRPA1-205ENST00000558036 HIST1H3AP68431 136 aa17.9■□□□□ 0.46
SNRPA1-205ENST00000558036 INAQ16352 499 aa17.9■□□□□ 0.46
SNRPA1-205ENST00000558036 HIST2H3PS2Q5TEC6 136 aa17.9■□□□□ 0.46
SNRPA1-205ENST00000558036 HIST2H3AQ71DI3 136 aa17.9■□□□□ 0.46
SNRPA1-205ENST00000558036 MFSD4AQ8N468 514 aa17.9■□□□□ 0.46
SNRPA1-205ENST00000558036 GMPPAQ96IJ6 420 aaPredicted RBP17.9■□□□□ 0.46
SNRPA1-205ENST00000558036 GPR137Q96N19 417 aa17.9■□□□□ 0.46
SNRPA1-205ENST00000558036 PBOV1Q9GZY1 135 aa17.9■□□□□ 0.46
SNRPA1-205ENST00000558036 DDX28Q9NUL7 540 aaKnown RBP17.9■□□□□ 0.46
SNRPA1-205ENST00000558036 NCOA6Q14686 2063 aaPredicted RBP17.9■□□□□ 0.46
SNRPA1-205ENST00000558036 F5H5K5 113 aa17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 DBHP09172 617 aa17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 CST2P09228 141 aa17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 ZNF32P17041 273 aa17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 PSMA6P60900 246 aaKnown RBP17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 SLC25A35Q3KQZ1 300 aa17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 ACSF3Q4G176 576 aaPredicted RBP17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 ZNF774Q6NX45 483 aa17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 ZNF544Q6NX49 715 aa17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 SLC16A14Q7RTX9 510 aa17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 LAX1Q8IWV1 398 aa17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 C9orf106Q8NAJ2 232 aa17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 AK6Q9Y3D8 172 aaKnown RBP17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 NBEAQ8NFP9 2946 aa17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 A0A075B6Q4 140 aa17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 A0A0G2JK05 382 aa17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 IQCMA0A1B0GVH7 501 aa17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 LOC107986453A0A1B0GWG9 222 aa17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 TTRP02766 147 aa17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 S100A5P33763 92 aa17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 RSPO1Q2MKA7 263 aaPredicted RBP17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 ELFN2Q5R3F8 820 aa17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 IDNKQ5T6J7 187 aa17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 FAM180AQ6UWF9 173 aa17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 RHOUQ7L0Q8 258 aa17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 CISD2Q8N5K1 135 aaKnown RBP17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 ZNF283Q8N7M2 679 aa17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 AKR7LQ8NHP1 331 aa17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 ZNF319Q9P2F9 582 aa17.89■□□□□ 0.45
SNRPA1-205ENST00000558036 TRAV8-7A0A075B6U6 113 aa17.88■□□□□ 0.45
SNRPA1-205ENST00000558036 TRAV1-2A0A0B4J238 106 aa17.88■□□□□ 0.45
SNRPA1-205ENST00000558036 C5orf63A6NC05 138 aa17.88■□□□□ 0.45
SNRPA1-205ENST00000558036 CLDN25C9JDP6 229 aa17.88■□□□□ 0.45
SNRPA1-205ENST00000558036 LMX1BO60663 402 aa17.88■□□□□ 0.45
SNRPA1-205ENST00000558036 SS18L1O75177 396 aaPredicted RBP17.88■□□□□ 0.45
SNRPA1-205ENST00000558036 RAB3BP20337 219 aa17.88■□□□□ 0.45
SNRPA1-205ENST00000558036 DCTDP32321 178 aa17.88■□□□□ 0.45
SNRPA1-205ENST00000558036 CEP78Q5JTW2 689 aa17.88■□□□□ 0.45
SNRPA1-205ENST00000558036 COMMD3Q9UBI1 195 aa17.88■□□□□ 0.45
SNRPA1-205ENST00000558036 DAPK2Q9UIK4 370 aa17.88■□□□□ 0.45
SNRPA1-205ENST00000558036 PEX16Q9Y5Y5 336 aa17.88■□□□□ 0.45
SNRPA1-205ENST00000558036 OR14I1A6ND48 311 aa17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 OR6C65A6NJZ3 312 aa17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 E9PLN8 166 aa17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 RPL36A-HNRNPH2H7BZ11 118 aa17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 SGCEO43556 437 aa17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 SLC2A2P11168 524 aaPredicted RBP17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 ABOP16442 354 aa17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 LINC00303Q3SY05 128 aa17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 SFXN4Q6P4A7 337 aa17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 FAM57BQ71RH2 274 aa17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 CNEP1R1Q8N9A8 125 aa17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 ABCB9Q9NP78 766 aa17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 CRNNQ9UBG3 495 aaPredicted RBP17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 ANXA2P07355 339 aaKnown RBP17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 ACSM4P0C7M7 580 aa17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 SLC6A9P48067 706 aa17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 GRB2P62993 217 aaKnown RBP17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 PSG4Q00888 419 aa17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 GFOD2Q3B7J2 385 aa17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 SFRP5Q5T4F7 317 aa17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 LINC00299Q6ZSB3 139 aa17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 TPRA1Q86W33 373 aa17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 ELMOD2Q8IZ81 293 aa17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 ZNF433Q8N7K0 673 aaPredicted RBP17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 ASB5Q8WWX0 329 aa17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 KCNJ15Q99712 375 aa17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 SLC30A2Q9BRI3 323 aa17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 GP6Q9HCN6 339 aa17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 HMG20AQ9NP66 347 aa17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 ZNF224Q9NZL3 707 aa17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 DHDHQ9UQ10 334 aa17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 TLN1Q9Y490 2541 aaKnown RBP17.87■□□□□ 0.45
SNRPA1-205ENST00000558036 TRBV5-7A0A0A0MS05 114 aa17.86■□□□□ 0.45
SNRPA1-205ENST00000558036 A6NIN4 97 aa17.86■□□□□ 0.45
SNRPA1-205ENST00000558036 TPOP07202 933 aa17.86■□□□□ 0.45
SNRPA1-205ENST00000558036 MAPK3P27361 379 aaPredicted RBP17.86■□□□□ 0.45
SNRPA1-205ENST00000558036 FOXF2Q12947 444 aa17.86■□□□□ 0.45
SNRPA1-205ENST00000558036 C3P1Q6ZMU1 363 aa17.86■□□□□ 0.45
SNRPA1-205ENST00000558036 SNX29P2Q8IUI4 249 aa17.86■□□□□ 0.45
SNRPA1-205ENST00000558036 OR8B12Q8NGG6 310 aa17.86■□□□□ 0.45
SNRPA1-205ENST00000558036 OR51E1Q8TCB6 317 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms