RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 TRDV1A0A1B0GX56 115 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 ZNF716A6NP11 495 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 C12orf71A8MTZ7 269 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 J3QRK9 145 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 EIF1BO60739 113 aaKnown RBP10.88□□□□□ -0.67
SHMT2-230ENST00000557427 MRPL33O75394 65 aaKnown RBP10.88□□□□□ -0.67
SHMT2-230ENST00000557427 AKR7A3O95154 331 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 IL1AP01583 271 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 SBK2P0C263 348 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 ASAH2BP0C7U1 165 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 GALP22466 123 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 FGF9P31371 208 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-230ENST00000557427 RPL4P36578 427 aaKnown RBP10.88□□□□□ -0.67
SHMT2-230ENST00000557427 GZMKP49863 264 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 MAP2K6P52564 334 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 RPS7P62081 194 aaKnown RBP10.88□□□□□ -0.67
SHMT2-230ENST00000557427 EGR4Q05215 589 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 BSPH1Q075Z2 132 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 LGALS3BPQ08380 585 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 GALEQ14376 348 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 GGTLC2Q14390 218 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 P2RY6Q15077 328 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 STK11Q15831 433 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 KLHL12Q53G59 568 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 SLC35D3Q5M8T2 416 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 PRR31Q5SQ13 230 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 C11orf71Q6IPW1 123 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 Q6ZT83 130 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 C3orf56Q8N813 242 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 TMEM99Q8N816 258 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 POMGNT2Q8NAT1 580 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 OR52E2Q8NGJ4 325 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 SPRYD4Q8WW59 207 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-230ENST00000557427 HSD17B8Q92506 261 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 FAM168AQ92567 244 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 SLC25A36Q96CQ1 311 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 DDOQ99489 341 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 ALG8Q9BVK2 526 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 CACNG6Q9BXT2 260 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 POTEKPQ9BYX7 375 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 OR51V1Q9H2C8 321 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 FKRPQ9H9S5 495 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 ADGRL4Q9HBW9 690 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 NANSQ9NR45 359 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 ASB6Q9NWX5 421 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 TXNL4BQ9NX01 149 aaKnown RBP10.88□□□□□ -0.67
SHMT2-230ENST00000557427 CISD1Q9NZ45 108 aaKnown RBP10.88□□□□□ -0.67
SHMT2-230ENST00000557427 CRNNQ9UBG3 495 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-230ENST00000557427 ZNF229Q9UJW7 825 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 IER3IP1Q9Y5U9 82 aa10.88□□□□□ -0.67
SHMT2-230ENST00000557427 TRAV36DV7A0A075B6V5 113 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 IGKV3D-15A0A087WSY6 115 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 DAPL1A0PJW8 107 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 LIPT2A6NK58 231 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 A8MVM7 634 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 SHISA9B4DS77 424 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 LRRN3E7EW58 273 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 GPR171O14626 319 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 TXNDC12O95881 172 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 MT-ATP6P00846 226 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 CD14P08571 375 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 HIST1H1CP16403 213 aaKnown RBP10.87□□□□□ -0.67
SHMT2-230ENST00000557427 HNF1AP20823 631 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 IGHV1-2P23083 117 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 CALRP27797 417 aaKnown RBP10.87□□□□□ -0.67
SHMT2-230ENST00000557427 CD40LGP29965 261 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 S100A5P33763 92 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 RPS25P62851 125 aaKnown RBP10.87□□□□□ -0.67
SHMT2-230ENST00000557427 H3F3AP84243 136 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 TAB1Q15750 504 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 CR1LQ2VPA4 569 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 TMEM225Q6GV28 225 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 ABLIM2Q6H8Q1 611 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 C5orf46Q6UWT4 87 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 CYB561A3Q8NBI2 242 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 SEMA6DQ8NFY4 1073 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 OR4K13Q8NH42 304 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 APH1AQ96BI3 265 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 SOX7Q9BT81 388 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 NMNAT2Q9BZQ4 307 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 GSTK1Q9Y2Q3 226 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 NOX1Q9Y5S8 564 aa10.87□□□□□ -0.67
SHMT2-230ENST00000557427 NOTCH1P46531 2555 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 CIB4A0PJX0 185 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 VWC2LB2RUY7 222 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 DNPH1O43598 174 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 LALBAP00709 142 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 BGLAPP02818 100 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 RPS19P39019 145 aaKnown RBP10.86□□□□□ -0.67
SHMT2-230ENST00000557427 ETV6P41212 452 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 RORCP51449 518 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 SLC25A1P53007 311 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 PPP5CP53041 499 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 TAS2R43P59537 309 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 ZNF45Q02386 682 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 ALG10Q5BKT4 473 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 C9orf135Q5VTT2 229 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 C1orf140Q5VVS0 124 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 FBXW9Q5XUX1 488 aa10.86□□□□□ -0.67
SHMT2-230ENST00000557427 Q6ZNX1 250 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms