RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 G3V2T6 193 aa12.98□□□□□ -0.33
ACTN1-217ENST00000556203 H3BSA7 217 aa12.98□□□□□ -0.33
ACTN1-217ENST00000556203 NDUFS8O00217 210 aa12.98□□□□□ -0.33
ACTN1-217ENST00000556203 HPXP02790 462 aa12.98□□□□□ -0.33
ACTN1-217ENST00000556203 MT-ND5P03915 603 aa12.98□□□□□ -0.33
ACTN1-217ENST00000556203 HMGN1P05114 100 aa12.98□□□□□ -0.33
ACTN1-217ENST00000556203 SPARCP09486 303 aa12.98□□□□□ -0.33
ACTN1-217ENST00000556203 PSKH1P11801 424 aa12.98□□□□□ -0.33
ACTN1-217ENST00000556203 ZNF23P17027 643 aa12.98□□□□□ -0.33
ACTN1-217ENST00000556203 MAGEB1P43366 347 aa12.98□□□□□ -0.33
ACTN1-217ENST00000556203 CDK5Q00535 292 aa12.98□□□□□ -0.33
ACTN1-217ENST00000556203 ZDHHC13Q8IUH4 622 aa12.98□□□□□ -0.33
ACTN1-217ENST00000556203 ZNF786Q8N393 782 aa12.98□□□□□ -0.33
ACTN1-217ENST00000556203 MAP6Q96JE9 813 aa12.98□□□□□ -0.33
ACTN1-217ENST00000556203 DCLRE1CQ96SD1 692 aaKnown RBP12.98□□□□□ -0.33
ACTN1-217ENST00000556203 ATF6BQ99941 703 aa12.98□□□□□ -0.33
ACTN1-217ENST00000556203 STARD10Q9Y365 291 aa12.98□□□□□ -0.33
ACTN1-217ENST00000556203 FLNAP21333 2647 aaKnown RBP12.98□□□□□ -0.33
ACTN1-217ENST00000556203 VWC2LB2RUY7 222 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 F5H5K5 113 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 LYNX1G3V0Z9 82 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 SURF4O15260 269 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 MITFO75030 526 aaPredicted RBP12.97□□□□□ -0.33
ACTN1-217ENST00000556203 LYNX1P0DP58 116 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 PAICSP22234 425 aaKnown RBP12.97□□□□□ -0.33
ACTN1-217ENST00000556203 USF1P22415 310 aaPredicted RBP12.97□□□□□ -0.33
ACTN1-217ENST00000556203 TUBG1P23258 451 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 NR4A2P43354 598 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 RGS6P49758 472 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 ENTPD1P49961 510 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 BLVRAP53004 296 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 CRISP1P54107 249 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 ACTR3P61158 418 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 ECH1Q13011 328 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 PSG7Q13046 419 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 GGTLC2Q14390 218 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 KPNB1Q14974 876 aaKnown RBP12.97□□□□□ -0.33
ACTN1-217ENST00000556203 KRTAP27-1Q3LI81 207 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 LINC01590Q5TEZ4 76 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 TMEM236Q5W0B7 351 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 PLBD1Q6P4A8 553 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 PARP8Q8N3A8 854 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 PYDC1Q8WXC3 89 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 PTP4A1Q93096 173 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 COG8Q96MW5 612 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 TEX12Q9BXU0 123 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 BPESC1Q9GZL8 116 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 OR51V1Q9H2C8 321 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 SEMA6AQ9H2E6 1030 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 SLC25A19Q9HC21 320 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 TUBG2Q9NRH3 451 aa12.97□□□□□ -0.33
ACTN1-217ENST00000556203 RTTNQ86VV8 2226 aa12.96□□□□□ -0.33
ACTN1-217ENST00000556203 PLSCR5A0PG75 271 aa12.96□□□□□ -0.33
ACTN1-217ENST00000556203 PRR23D1E9PI22 279 aaPredicted RBP12.96□□□□□ -0.33
ACTN1-217ENST00000556203 J3QW42 95 aa12.96□□□□□ -0.33
ACTN1-217ENST00000556203 ZNF593O00488 134 aaPredicted RBP12.96□□□□□ -0.33
ACTN1-217ENST00000556203 SPRY3O43610 288 aa12.96□□□□□ -0.33
ACTN1-217ENST00000556203 TIMM8AO60220 97 aaPredicted RBP12.96□□□□□ -0.33
ACTN1-217ENST00000556203 NCR1O76036 304 aa12.96□□□□□ -0.33
ACTN1-217ENST00000556203 PRR23D2P0DMB1 279 aaPredicted RBP12.96□□□□□ -0.33
ACTN1-217ENST00000556203 ZNF81P51508 661 aa12.96□□□□□ -0.33
ACTN1-217ENST00000556203 MMP15P51511 669 aa12.96□□□□□ -0.33
ACTN1-217ENST00000556203 CCL8P80075 99 aa12.96□□□□□ -0.33
ACTN1-217ENST00000556203 KRTAP1-1Q07627 177 aa12.96□□□□□ -0.33
ACTN1-217ENST00000556203 LOXL1Q08397 574 aaPredicted RBP12.96□□□□□ -0.33
ACTN1-217ENST00000556203 PCK2Q16822 640 aa12.96□□□□□ -0.33
ACTN1-217ENST00000556203 RSPO1Q2MKA7 263 aaPredicted RBP12.96□□□□□ -0.33
ACTN1-217ENST00000556203 PCGF3Q3KNV8 242 aa12.96□□□□□ -0.33
ACTN1-217ENST00000556203 DCXRQ7Z4W1 244 aa12.96□□□□□ -0.33
ACTN1-217ENST00000556203 OR10S1Q8NGN2 331 aa12.96□□□□□ -0.33
ACTN1-217ENST00000556203 RDH5Q92781 318 aa12.96□□□□□ -0.33
ACTN1-217ENST00000556203 APOBEC3DQ96AK3 386 aaPredicted RBP12.96□□□□□ -0.33
ACTN1-217ENST00000556203 CMBLQ96DG6 245 aa12.96□□□□□ -0.33
ACTN1-217ENST00000556203 CENPNQ96H22 339 aaPredicted RBP12.96□□□□□ -0.33
ACTN1-217ENST00000556203 PLEKHA8Q96JA3 519 aa12.96□□□□□ -0.33
ACTN1-217ENST00000556203 GABARAPL1Q9H0R8 117 aa12.96□□□□□ -0.33
ACTN1-217ENST00000556203 CYSLTR2Q9NS75 346 aa12.96□□□□□ -0.33
ACTN1-217ENST00000556203 KRT84Q9NSB2 600 aa12.96□□□□□ -0.33
ACTN1-217ENST00000556203 TVP23BQ9NYZ1 205 aa12.96□□□□□ -0.33
ACTN1-217ENST00000556203 PTTG3PQ9NZH4 202 aa12.96□□□□□ -0.33
ACTN1-217ENST00000556203 ZSCAN5BA6NJL1 495 aa12.95□□□□□ -0.34
ACTN1-217ENST00000556203 GLCEO94923 617 aa12.95□□□□□ -0.34
ACTN1-217ENST00000556203 IGHV1-46P01743 117 aa12.95□□□□□ -0.34
ACTN1-217ENST00000556203 ACSM4P0C7M7 580 aa12.95□□□□□ -0.34
ACTN1-217ENST00000556203 COL8A2P25067 703 aa12.95□□□□□ -0.34
ACTN1-217ENST00000556203 GIFP27352 417 aa12.95□□□□□ -0.34
ACTN1-217ENST00000556203 GSTT1P30711 240 aa12.95□□□□□ -0.34
ACTN1-217ENST00000556203 LIPAP38571 399 aa12.95□□□□□ -0.34
ACTN1-217ENST00000556203 ESRRGP62508 458 aa12.95□□□□□ -0.34
ACTN1-217ENST00000556203 TSTQ16762 297 aaKnown RBP12.95□□□□□ -0.34
ACTN1-217ENST00000556203 KLHL12Q53G59 568 aa12.95□□□□□ -0.34
ACTN1-217ENST00000556203 TEX30Q5JUR7 227 aa12.95□□□□□ -0.34
ACTN1-217ENST00000556203 ERI1Q8IV48 349 aaKnown RBP12.95□□□□□ -0.34
ACTN1-217ENST00000556203 CPOQ8IVL8 374 aa12.95□□□□□ -0.34
ACTN1-217ENST00000556203 ZNF540Q8NDQ6 660 aa12.95□□□□□ -0.34
ACTN1-217ENST00000556203 OR5L1Q8NGL2 311 aa12.95□□□□□ -0.34
ACTN1-217ENST00000556203 OR6N2Q8NGY6 317 aa12.95□□□□□ -0.34
ACTN1-217ENST00000556203 INTS14Q96SY0 518 aa12.95□□□□□ -0.34
ACTN1-217ENST00000556203 DECR2Q9NUI1 292 aa12.95□□□□□ -0.34
ACTN1-217ENST00000556203 DDX28Q9NUL7 540 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms