RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 OCLNQ16625 522 aa11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 ZNF181Q2M3W8 571 aa11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 DEFB112Q30KQ8 113 aa11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 ZNF404Q494X3 552 aa11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 CGB2Q6NT52 195 aa11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 C1orf94Q6P1W5 598 aa11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 C16orf87Q6PH81 154 aa11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 LYPD2Q6UXB3 125 aa11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 PTCHD4Q6ZW05 846 aa11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 MUC20Q8N307 709 aaPredicted RBP11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 FITM2Q8N6M3 262 aa11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 PCYOX1LQ8NBM8 494 aa11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 OR8G5Q8NG78 346 aa11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 OR1F12Q8NHA8 337 aa11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 DYDC1Q8WWB3 177 aa11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 WFDC12Q8WWY7 111 aa11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 RAB40AQ8WXH6 277 aa11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 ACOT11Q8WXI4 607 aaPredicted RBP11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 RASD2Q96D21 266 aa11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 SH3GL1Q99961 368 aa11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 SLC30A2Q9BRI3 323 aa11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 CDADC1Q9BWV3 514 aa11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 TMEM120AQ9BXJ8 343 aa11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 MS4A7Q9GZW8 240 aaPredicted RBP11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 SAR1AQ9NR31 198 aa11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 CMTM6Q9NX76 183 aa11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 PTTG3PQ9NZH4 202 aa11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 VSX1Q9NZR4 365 aaPredicted RBP11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 PDP1Q9P0J1 537 aaPredicted RBP11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 OR5V1Q9UGF6 321 aa11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 COA3Q9Y2R0 106 aaPredicted RBP11.97□□□□□ -0.49
CHMP4BP1-201ENST00000556017 C22orf46C9J442 243 aa11.96□□□□□ -0.49
CHMP4BP1-201ENST00000556017 F5H5P2 479 aa11.96□□□□□ -0.49
CHMP4BP1-201ENST00000556017 HOXA3O43365 443 aaPredicted RBP11.96□□□□□ -0.49
CHMP4BP1-201ENST00000556017 AHCYL1O43865 530 aa11.96□□□□□ -0.49
CHMP4BP1-201ENST00000556017 FCN3O75636 299 aa11.96□□□□□ -0.49
CHMP4BP1-201ENST00000556017 RPS2P15880 293 aaKnown RBP11.96□□□□□ -0.49
CHMP4BP1-201ENST00000556017 ANOS1P23352 680 aa11.96□□□□□ -0.49
CHMP4BP1-201ENST00000556017 PRSS12P56730 875 aa11.96□□□□□ -0.49
CHMP4BP1-201ENST00000556017 LSM6P62312 80 aaKnown RBP11.96□□□□□ -0.49
CHMP4BP1-201ENST00000556017 MAB21L1Q13394 359 aa11.96□□□□□ -0.49
CHMP4BP1-201ENST00000556017 KCNMB1Q16558 191 aa11.96□□□□□ -0.49
CHMP4BP1-201ENST00000556017 KRTAP27-1Q3LI81 207 aa11.96□□□□□ -0.49
CHMP4BP1-201ENST00000556017 ZBED5Q49AG3 693 aa11.96□□□□□ -0.49
CHMP4BP1-201ENST00000556017 BRD3OSQ6XYD6 125 aa11.96□□□□□ -0.49
CHMP4BP1-201ENST00000556017 COLCA1Q6ZS62 124 aa11.96□□□□□ -0.49
CHMP4BP1-201ENST00000556017 MBOAT2Q6ZWT7 520 aa11.96□□□□□ -0.49
CHMP4BP1-201ENST00000556017 RHOUQ7L0Q8 258 aa11.96□□□□□ -0.49
CHMP4BP1-201ENST00000556017 RNF113BQ8IZP6 322 aaKnown RBP11.96□□□□□ -0.49
CHMP4BP1-201ENST00000556017 OR2T12Q8NG77 320 aa11.96□□□□□ -0.49
CHMP4BP1-201ENST00000556017 SYT4Q9H2B2 425 aa11.96□□□□□ -0.49
CHMP4BP1-201ENST00000556017 NRIP3Q9NQ35 241 aa11.96□□□□□ -0.49
CHMP4BP1-201ENST00000556017 ATPIF1Q9UII2 106 aa11.96□□□□□ -0.49
CHMP4BP1-201ENST00000556017 SIGLEC7Q9Y286 467 aa11.96□□□□□ -0.49
CHMP4BP1-201ENST00000556017 LHFPL6Q9Y693 200 aa11.96□□□□□ -0.49
CHMP4BP1-201ENST00000556017 ELOVL7A1L3X0 281 aa11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 FAM181BA6NEQ2 426 aa11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 J3QW42 95 aa11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 SURF4O15260 269 aa11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 IFNA14P01570 189 aa11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 VIMP08670 466 aaKnown RBP11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 CPT2P23786 658 aa11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 PSMB10P40306 273 aa11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 GUCA1AP43080 201 aaPredicted RBP11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 GATA4P43694 442 aa11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 MTNR1AP48039 350 aa11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 MEP1BQ16820 701 aa11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 MIDNQ504T8 468 aa11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 CLEC12AQ5QGZ9 265 aa11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 SLC27A4Q6P1M0 643 aa11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 LRRN1Q6UXK5 716 aa11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 SPATC1Q76KD6 591 aa11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 MOGAT3Q86VF5 341 aa11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 ATG16L2Q8NAA4 619 aa11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 OR10S1Q8NGN2 331 aa11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 SLC7A13Q8TCU3 470 aa11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 NEIL1Q96FI4 390 aaPredicted RBP11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 ZNF570Q96NI8 536 aa11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 TSSK2Q96PF2 358 aa11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 GPX7Q96SL4 187 aaPredicted RBP11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 SIKE1Q9BRV8 207 aa11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 NUAK2Q9H093 628 aa11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 NMNAT1Q9HAN9 279 aaPredicted RBP11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 GRHPRQ9UBQ7 328 aa11.95□□□□□ -0.5
CHMP4BP1-201ENST00000556017 IQCF6A8MYZ5 107 aa11.94□□□□□ -0.5
CHMP4BP1-201ENST00000556017 IFNL4K9M1U5 179 aa11.94□□□□□ -0.5
CHMP4BP1-201ENST00000556017 TNFRSF13BO14836 293 aaPredicted RBP11.94□□□□□ -0.5
CHMP4BP1-201ENST00000556017 SLC16A7O60669 478 aa11.94□□□□□ -0.5
CHMP4BP1-201ENST00000556017 HLA-DPB1P04440 258 aa11.94□□□□□ -0.5
CHMP4BP1-201ENST00000556017 MMP9P14780 707 aa11.94□□□□□ -0.5
CHMP4BP1-201ENST00000556017 CDKN2AP42771 156 aaKnown RBP11.94□□□□□ -0.5
CHMP4BP1-201ENST00000556017 RAD23AP54725 363 aa11.94□□□□□ -0.5
CHMP4BP1-201ENST00000556017 GNB2P62879 340 aa11.94□□□□□ -0.5
CHMP4BP1-201ENST00000556017 KRR1Q13601 381 aaKnown RBP11.94□□□□□ -0.5
CHMP4BP1-201ENST00000556017 WDR25Q64LD2 544 aaPredicted RBP11.94□□□□□ -0.5
CHMP4BP1-201ENST00000556017 ZNF730Q6ZMV8 503 aa11.94□□□□□ -0.5
CHMP4BP1-201ENST00000556017 GLB1L2Q8IW92 636 aa11.94□□□□□ -0.5
CHMP4BP1-201ENST00000556017 SLC15A3Q8IY34 581 aa11.94□□□□□ -0.5
CHMP4BP1-201ENST00000556017 KIR3DL3Q8N743 410 aa11.94□□□□□ -0.5
CHMP4BP1-201ENST00000556017 C19orf18Q8NEA5 215 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms